FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_LACJO (Elongation factor G OS=Lactobacillus johnsonii GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 99/180 (55.00%), Postives = 134/180 (74.44%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            +++ RNIGI AHID+GKTT TERIL+YTG+IH+I E    D   ++MD M+ E+E+GITI SAAT+  WKDY+INIIDTPGHVDFT+EVER+LRVLDGA+ VL +  GV+ Q+  V RQ   Y VPR+ F+NK+D++GAD  K +     +L  +  AVQ+P+G  D F+G++DL+ + A
Sbjct:    9 LDKTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETHEGD---SQMDWMEEEKERGITITSAATTAQWKDYRINIIDTPGHVDFTIEVERSLRVLDGAVTVLDAQAGVEPQTENVWRQAETYGVPRIVFVNKMDKIGADFDKSVKSLHERLNANAQAVQMPIGSADTFEGVIDLINMVA 185          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_LACH4 (Elongation factor G OS=Lactobacillus helveticus (strain DPC 4571) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 100/180 (55.56%), Postives = 133/180 (73.89%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            + + RNIGI AHID+GKTT TERIL+YTG+IH+I E    D   ++MD MD E+E+GITI SAAT+  WKDY+INIIDTPGHVDFT+EVER+LRVLDGA+ VL +  GV+ Q+  V RQ   Y VPR+ F+NK+D++GAD  K +     +L  +  AVQ+P+G  D F+G++DL+ + A
Sbjct:    9 LAKTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETHEGD---SQMDWMDEEKERGITITSAATTAQWKDYRINIIDTPGHVDFTIEVERSLRVLDGAVTVLDAQAGVEPQTENVWRQAETYGVPRIVFVNKMDKIGADFDKSVKSLHERLNANAHAVQMPIGSADTFEGVIDLINMVA 185          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_LACBA (Elongation factor G OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 101/183 (55.19%), Postives = 140/183 (76.50%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            +E+ RNIGI AHID+GKTT TERIL+YTG+IH+I E    DG  ++MD M+ E+E+GITI SAAT+  WK ++INIIDTPGHVDFTVEVER+LRVLDGA+ VL    GV+ Q+ TV RQ   ++VPR+ F+NK+D++GAD    ++    +L+ +  A+Q+ +G ED+F+G+VDLV++ AY +
Sbjct:    9 LEKTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETH--DGA-SQMDWMEQEQERGITITSAATTAEWKGHRINIIDTPGHVDFTVEVERSLRVLDGAVAVLDGQAGVEPQTETVWRQASDFDVPRIVFVNKMDKLGADFDFSVNSIHERLQANALALQMAIGAEDEFEGVVDLVEMKAYVY 188          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_DESVV (Elongation factor G OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 104/179 (58.10%), Postives = 134/179 (74.86%), Query Frame = 3
Query:  291 RNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            RNIGI AHID+GKTT TERILFYTG  H+I EV   DG  A MD M+ E+E+GITI SAAT+C W+++++NIIDTPGHVDFT+EVER+LRVLDGA+ V  +V GV+ QS TV RQ  RY VPR+ F+NK+DR+GA   + +   R +LR     VQ+P+G ED+F+G++DL+   A  F
Sbjct:   11 RNIGIMAHIDAGKTTTTERILFYTGVSHKIGEVH--DGA-ATMDWMEQEQERGITITSAATTCFWREHRVNIIDTPGHVDFTIEVERSLRVLDGAVCVFDAVAGVEPQSETVWRQADRYGVPRICFVNKMDRIGASFERCVGMIRDRLRAKPIPVQLPIGAEDRFEGVIDLITGKAVTF 186          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_DESVH (Elongation factor G OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 104/179 (58.10%), Postives = 134/179 (74.86%), Query Frame = 3
Query:  291 RNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            RNIGI AHID+GKTT TERILFYTG  H+I EV   DG  A MD M+ E+E+GITI SAAT+C W+++++NIIDTPGHVDFT+EVER+LRVLDGA+ V  +V GV+ QS TV RQ  RY VPR+ F+NK+DR+GA   + +   R +LR     VQ+P+G ED+F+G++DL+   A  F
Sbjct:   11 RNIGIMAHIDAGKTTTTERILFYTGVSHKIGEVH--DGA-ATMDWMEQEQERGITITSAATTCFWREHRVNIIDTPGHVDFTIEVERSLRVLDGAVCVFDAVAGVEPQSETVWRQADRYGVPRICFVNKMDRIGASFERCVGMIRDRLRAKPIPVQLPIGAEDRFEGVIDLITGKAVTF 186          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_CHLTE (Elongation factor G OS=Chlorobium tepidum GN=fusA-1 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 102/198 (51.52%), Postives = 144/198 (72.73%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +++R+RNIGI AHID+GKTT TERIL+YTGR+H++ EV   +G GA MD M+ E+E+GITI SAAT+C W          +++INIIDTPGHVDFTVEVER+LRVLDGA+ + C+VGGV+ QS TV RQ  +Y VPR+A++NK+DR+GA+ ++ +   R +L  +   +Q+P+G  + F G VDL+++    +    G
Sbjct:    6 ALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVH--EG-GATMDWMEQEKERGITITSAATTCFWTPKYGNYAGLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAIRERLGANPVPIQIPIGQGEVFAGFVDLIRMKGIIYDKEDG 200          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_CHLP8 (Elongation factor G OS=Chlorobaculum parvum (strain NCIB 8327) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 102/198 (51.52%), Postives = 142/198 (71.72%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +++++RNIGI AHID+GKTT TERIL+YTGR+H++ EV   +G GA MD M+ E+E+GITI SAAT+C W          +++INIIDTPGHVDFTVEVER+LRVLDGA+ + C+VGGV+ QS TV RQ  +Y VPR+A++NK+DR GAD +  +   R +L  +   +Q+P+G  + F G VDL+++    +    G
Sbjct:    6 ALDKVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVH--EG-GATMDWMEQEKERGITITSAATTCFWTPKFGNYSGVNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRTGADFFNAVKAIRERLGANPVPIQIPIGEGEMFAGFVDLIRMKGIIYDKEDG 200          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_CHLCH (Elongation factor G OS=Chlorobium chlorochromatii (strain CaD3) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 104/198 (52.53%), Postives = 141/198 (71.21%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +++R+RNIGI AHID+GKTT TERIL+YTGR+H + EV   DG GA MD M+ E+E+GITI SAAT+C W          +++INIIDTPGHVDFTVEVER+LRVLDGA+ + C+VGGV+ QS TV RQ  +Y VPR+A+INK+DR GA+ +  +   R +L  +   +Q+P+G  + F G VDL+++    +    G
Sbjct:    6 ALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHRMGEVH--DG-GATMDWMEQEKERGITITSAATTCFWTPKFGNYQGINHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYINKMDRTGANFFDAVKSIRERLGANPVPLQIPIGEGEMFAGFVDLIRMKGIIYDKEDG 200          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_BACWK (Elongation factor G OS=Bacillus weihenstephanensis (strain KBAB4) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.890e-51
Identity = 102/189 (53.97%), Postives = 138/189 (73.02%), Query Frame = 3
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            S+E  RNIGI AHID+GKTT TERIL+YTGRIH+I E    +G  ++MD M+ E+E+GITI SAAT+  WK +++NIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y VPR+ F+NK+D++GAD    +     +L+ +   +Q+P+G ED+F G++DLV+  AY +    G
Sbjct:    6 SLENTRNIGIMAHIDAGKTTATERILYYTGRIHKIGETH--EGA-SQMDWMEQEQERGITITSAATTAQWKGHRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGADFLYSVGTIHDRLQANAHPIQLPIGAEDEFNGIIDLVEECAYMYSNDLG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_NEOSM (Elongation factor G OS=Neorickettsia sennetsu (strain Miyayama) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.161e-50
Identity = 104/188 (55.32%), Postives = 136/188 (72.34%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTG---RIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHG 833
            +E++RNIGI AHID+GKTT TERIL YTG    + E+HE        A MD M+ E+E+GITI SAAT+C WK  +INIIDTPGHVDFT+EVER+LRVLDGA+ V   V GV+ QS TV RQ  ++ VPRL F+NK+DRMGAD ++  +   SKL  +   +Q+P+G+ + F G+VDLV++ A Y+ G
Sbjct:    8 LEKIRNIGIMAHIDAGKTTTTERILLYTGVNRTVGEVHEG------AATMDWMEQEKERGITITSAATTCWWKGAKINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADKHNVPRLCFVNKMDRMGADFYRCAEMLVSKLSANPVILQLPIGVSESFVGVVDLVKMQAIYWQG 189          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFG_LACJO8.890e-5155.00Elongation factor G OS=Lactobacillus johnsonii GN=... [more]
EFG_LACH48.890e-5155.56Elongation factor G OS=Lactobacillus helveticus (s... [more]
EFG_LACBA8.890e-5155.19Elongation factor G OS=Lactobacillus brevis (strai... [more]
EFG_DESVV8.890e-5158.10Elongation factor G OS=Desulfovibrio vulgaris subs... [more]
EFG_DESVH8.890e-5158.10Elongation factor G OS=Desulfovibrio vulgaris (str... [more]
EFG_CHLTE8.890e-5151.52Elongation factor G OS=Chlorobium tepidum GN=fusA-... [more]
EFG_CHLP88.890e-5151.52Elongation factor G OS=Chlorobaculum parvum (strai... [more]
EFG_CHLCH8.890e-5152.53Elongation factor G OS=Chlorobium chlorochromatii ... [more]
EFG_BACWK8.890e-5153.97Elongation factor G OS=Bacillus weihenstephanensis... [more]
EFG_NEOSM1.161e-5055.32Elongation factor G OS=Neorickettsia sennetsu (str... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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