FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_AERHH (Elongation factor G OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fusA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.161e-50
Identity = 103/187 (55.08%), Postives = 143/187 (76.47%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW-------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            +ER RNIGISAHID+GKTT TER+LFYTG  H+I EV   DG  A MD M+ E+E+GITI SAAT+  W       + ++INIIDTPGHVDFT+EVER++RVLDGA++V C+VGGVQ QS TV RQ  +Y+VPR+AF+NK+DR GA+  + ++  +++L+ +   +Q+ +G E+ F+G++DLV++ A
Sbjct:    7 IERYRNIGISAHIDAGKTTTTERVLFYTGVSHKIGEVH--DGA-ATMDWMEQEQERGITITSAATTAFWSGMGKQFQPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRCVEHIKTRLKGNPVPLQLNIGSEENFKGVIDLVKMKA 190          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_XYLFT (Elongation factor G OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 105/190 (55.26%), Postives = 141/190 (74.21%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            + R RNIGI AHID+GKTT +ERILFY G  H++ EV   DG  A MD M+ E+E+GITI SAAT+  W         ++ NIIDTPGHVDFT+EVER+LRVLDGA+ VLC+VGGVQ QS TV RQ  +Y VPR+AF+NK+DR GA+  KV++Q +++L  +   +QVP+G ED F+G++DL+++ A ++
Sbjct:    7 IHRYRNIGIMAHIDAGKTTTSERILFYAGVCHQMGEVH--DGA-AVMDWMEQEQERGITITSAATTVFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYFVPRMAFVNKMDRTGANFDKVVEQLKARLGAYPVPMQVPIGAEDGFEGVIDLLKMKAIHW 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_XYLFM (Elongation factor G OS=Xylella fastidiosa (strain M12) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 105/190 (55.26%), Postives = 141/190 (74.21%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            + R RNIGI AHID+GKTT +ERILFY G  H++ EV   DG  A MD M+ E+E+GITI SAAT+  W         ++ NIIDTPGHVDFT+EVER+LRVLDGA+ VLC+VGGVQ QS TV RQ  +Y VPR+AF+NK+DR GA+  KV++Q +++L  +   +QVP+G ED F+G++DL+++ A ++
Sbjct:    7 IHRYRNIGIMAHIDAGKTTTSERILFYAGVCHQMGEVH--DGA-AVMDWMEQEQERGITITSAATTVFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYFVPRMAFVNKMDRTGANFDKVVEQLKARLGAYPVPMQVPIGAEDGFEGVIDLLKMKAIHW 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_XYLFA (Elongation factor G OS=Xylella fastidiosa GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 105/190 (55.26%), Postives = 141/190 (74.21%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            + R RNIGI AHID+GKTT +ERILFY G  H++ EV   DG  A MD M+ E+E+GITI SAAT+  W         ++ NIIDTPGHVDFT+EVER+LRVLDGA+ VLC+VGGVQ QS TV RQ  +Y VPR+AF+NK+DR GA+  KV++Q +++L  +   +QVP+G ED F+G++DL+++ A ++
Sbjct:    7 IHRYRNIGIMAHIDAGKTTTSERILFYAGVCHQMGEVH--DGA-AVMDWMEQEQERGITITSAATTVFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYFVPRMAFVNKMDRTGANFDKVVEQLKARLGAYPVPMQVPIGAEDGFEGVIDLLKMKAIHW 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_XYLF2 (Elongation factor G OS=Xylella fastidiosa (strain M23) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 105/190 (55.26%), Postives = 141/190 (74.21%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            + R RNIGI AHID+GKTT +ERILFY G  H++ EV   DG  A MD M+ E+E+GITI SAAT+  W         ++ NIIDTPGHVDFT+EVER+LRVLDGA+ VLC+VGGVQ QS TV RQ  +Y VPR+AF+NK+DR GA+  KV++Q +++L  +   +QVP+G ED F+G++DL+++ A ++
Sbjct:    7 IHRYRNIGIMAHIDAGKTTTSERILFYAGVCHQMGEVH--DGA-AVMDWMEQEQERGITITSAATTVFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYFVPRMAFVNKMDRTGANFDKVVEQLKARLGAYPVPMQVPIGAEDGFEGVIDLLKMKAIHW 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_PEDPA (Elongation factor G OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 101/180 (56.11%), Postives = 137/180 (76.11%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            +ER RNIGI AHID+GKTT TERIL+YTG+IH+I E    +G  ++MD M  E+E+GITI SAAT+ AWK+++INIIDTPGHVDFT+EVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y+VPR+ F NK+D++GAD    +     +L+ +   +Q+P+G ED FQG++DLV++ A
Sbjct:    9 LERTRNIGIMAHIDAGKTTTTERILYYTGKIHKIGETH--EGA-SQMDWMAQEQERGITITSAATTAAWKNHRINIIDTPGHVDFTIEVERSLRVLDGAVAVLDAQAGVEPQTETVWRQASDYDVPRIVFANKMDKLGADFDFSVQSIHDRLQANALPIQMPIGAEDDFQGIIDLVEMKA 185          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_MYCHJ (Elongation factor G OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=fusA PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 104/192 (54.17%), Postives = 139/192 (72.40%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K  ++  RNIGI AHID+GKTT TERILF+TG+IH+I E    DGV ++MD M+ E+E+GITI SAAT+  WK  +INIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y VPR+ ++NK+D+ GA+    ++  R+KL  +  A+Q+ +G E  F GL+DLV++ AY + G   E
Sbjct:    4 KFELKDYRNIGIMAHIDAGKTTTTERILFHTGKIHKIGETH--DGV-SQMDWMEQEKERGITITSAATTAFWKGKRINIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATNYSVPRIVYVNKMDKAGANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEE 192          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_MYCH7 (Elongation factor G OS=Mycoplasma hyopneumoniae (strain 7448) GN=fusA PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 104/192 (54.17%), Postives = 139/192 (72.40%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K  ++  RNIGI AHID+GKTT TERILF+TG+IH+I E    DGV ++MD M+ E+E+GITI SAAT+  WK  +INIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y VPR+ ++NK+D+ GA+    ++  R+KL  +  A+Q+ +G E  F GL+DLV++ AY + G   E
Sbjct:    4 KFELKDYRNIGIMAHIDAGKTTTTERILFHTGKIHKIGETH--DGV-SQMDWMEQEKERGITITSAATTAFWKGKRINIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATNYSVPRIVYVNKMDKAGANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEE 192          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_MYCH2 (Elongation factor G OS=Mycoplasma hyopneumoniae (strain 232) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 104/192 (54.17%), Postives = 139/192 (72.40%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            K  ++  RNIGI AHID+GKTT TERILF+TG+IH+I E    DGV ++MD M+ E+E+GITI SAAT+  WK  +INIIDTPGHVDFTVEVER+LRVLDGA+ VL +  GV+ Q+ TV RQ   Y VPR+ ++NK+D+ GA+    ++  R+KL  +  A+Q+ +G E  F GL+DLV++ AY + G   E
Sbjct:    4 KFELKDYRNIGIMAHIDAGKTTTTERILFHTGKIHKIGETH--DGV-SQMDWMEQEKERGITITSAATTAFWKGKRINIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATNYSVPRIVYVNKMDKAGANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEE 192          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_MARAV (Elongation factor G OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fusA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.516e-50
Identity = 101/194 (52.06%), Postives = 141/194 (72.68%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFH 830
            K  ++R RNIGI AH+D+GKTT TERIL+YTGR H++ E    DG     D M+ E+E+GITI SAA +  W+       +++INIIDTPGHVDFT+EVER+LRVLDGA++V C   GV+ QS TV RQ  +YEVPR+ F+NK+DR GA+  +V++Q R++L      +Q+P+G ED F+G+VDL+++ A Y++
Sbjct:    4 KTPIKRYRNIGICAHVDAGKTTTTERILYYTGRSHKMGETH--DGASTT-DWMEQEQERGITITSAAVTTFWQGMDKQYPEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQANKYEVPRMVFVNKMDRAGANFMRVVEQIRNRLGATTVPIQLPIGAEDDFEGIVDLLRMKAIYWN 194          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFG_AERHH1.161e-5055.08Elongation factor G OS=Aeromonas hydrophila subsp.... [more]
EFG_XYLFT1.516e-5055.26Elongation factor G OS=Xylella fastidiosa (strain ... [more]
EFG_XYLFM1.516e-5055.26Elongation factor G OS=Xylella fastidiosa (strain ... [more]
EFG_XYLFA1.516e-5055.26Elongation factor G OS=Xylella fastidiosa GN=fusA ... [more]
EFG_XYLF21.516e-5055.26Elongation factor G OS=Xylella fastidiosa (strain ... [more]
EFG_PEDPA1.516e-5056.11Elongation factor G OS=Pediococcus pentosaceus (st... [more]
EFG_MYCHJ1.516e-5054.17Elongation factor G OS=Mycoplasma hyopneumoniae (s... [more]
EFG_MYCH71.516e-5054.17Elongation factor G OS=Mycoplasma hyopneumoniae (s... [more]
EFG_MYCH21.516e-5054.17Elongation factor G OS=Mycoplasma hyopneumoniae (s... [more]
EFG_MARAV1.516e-5052.06Elongation factor G OS=Marinobacter aquaeolei (str... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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