FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_BOTFB (Elongation factor G, mitochondrial OS=Botryotinia fuckeliana (strain B05.10) GN=mef1 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.722e-74
Identity = 134/200 (67.00%), Postives = 165/200 (82.50%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW--------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++ + R+RNIGI+AHIDSGKTT TER+LFYTGRI+ IHEVRG+D VGAKMDSM+LEREKGITIQSAAT C W        + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++FINK+DRMGA+P+K ++Q   KLR   AA+QVP+G ED F G+VDL+++ A Y  G  GE
Sbjct:   95 RDRLRRVRNIGIAAHIDSGKTTATERVLFYTGRINAIHEVRGKDAVGAKMDSMELEREKGITIQSAATFCDWLKVENGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFINKMDRMGANPFKAVEQINQKLRIPAAALQVPIGSEDSFNGVVDLIRMKAIYNDGPKGE 294          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_DESPS (Elongation factor G 1 OS=Desulfotalea psychrophila GN=fusA1 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.722e-74
Identity = 137/192 (71.35%), Postives = 161/192 (83.85%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            + + ++RNIGISAHIDSGKTTLTERILFYT RIH IHEVRG+DGVGAKMDSM+LE+E+GITIQSAAT C WK   INIIDTPGHVDFTVEVERALRVLDGA+LVLCSVGGVQSQSITV+RQM RY VPR+AFINK DR GA+P KV  Q + KL+ +   +Q+P+GLE    G+VDLV + A Y+ G +G++
Sbjct:    3 KDLSKVRNIGISAHIDSGKTTLTERILFYTDRIHAIHEVRGKDGVGAKMDSMELEKERGITIQSAATFCNWKGTDINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQSITVNRQMTRYNVPRIAFINKCDRTGANPAKVTGQLQEKLQLNAHMMQMPIGLEGDLVGMVDLVTMKAVYYEGENGDE 194          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_NEMVE (Elongation factor G, mitochondrial OS=Nematostella vectensis GN=v1g236547 PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.474e-74
Identity = 135/187 (72.19%), Postives = 162/187 (86.63%), Query Frame = 3
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            RLRNIGISAHIDSGKTTLTER+LFYTGRI  +HEV+G+D VGA MDSM+LER++GITIQSAAT   WKD+ INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP +AFINKLDRMGA+  +VL Q R+KL H+ A +Q+P+GLE    G+VD+++  AYYF G +GE
Sbjct:   39 RLRNIGISAHIDSGKTTLTERLLFYTGRISHMHEVKGKDNVGATMDSMELERQRGITIQSAATYVNWKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCIAFINKLDRMGANHNRVLSQLRAKLNHNAALLQLPVGLEGNNTGVVDIIRWKAYYFDGDNGE 225          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_PONAB (Elongation factor G, mitochondrial OS=Pongo abelii GN=GFM1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.761e-74
Identity = 131/188 (69.68%), Postives = 162/188 (86.17%), Query Frame = 3
Query:  282 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E++RNIGISAHIDSGKTTLTER+L+YTGRI ++HEV+G+DGVGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV+RQM+RY VP L FINKLDRMG++P + L Q RSKL H+ A +Q+P+GLE  F+G++DL++  A YF G  G+
Sbjct:   44 EKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFMQIPIGLEGDFKGIIDLIEERAIYFDGDFGQ 231          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_MOUSE (Elongation factor G, mitochondrial OS=Mus musculus GN=Gfm1 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 9.761e-74
Identity = 132/188 (70.21%), Postives = 160/188 (85.11%), Query Frame = 3
Query:  282 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E++RNIGISAHIDSGKTTLTER+L+YTGRI  +HEV+G+DGVGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV RQM+RY VP L FINKLDRMG++P + L Q RSKL H+ A VQ+P+GLE  F+G++DL++  A YF G  G+
Sbjct:   45 EKIRNIGISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDININIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFLTFINKLDRMGSNPSRALQQMRSKLNHNAAFVQIPIGLEGDFKGIIDLIEERAIYFDGDFGQ 232          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_KLULA (Elongation factor G, mitochondrial OS=Kluyveromyces lactis GN=MEF1 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.275e-73
Identity = 131/196 (66.84%), Postives = 165/196 (84.18%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            ++ ++LRNIGISAHIDSGKTT TER+L+YTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    + Y  N+IDTPGH+DFT+EVERALR+LDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGA+P++ ++Q  +KLR   AA+QVP+G E + +G+V+++   A Y  GS+GEK
Sbjct:   60 DASKKLRNIGISAHIDSGKTTFTERVLYYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWDKDNESYHFNLIDTPGHIDFTIEVERALRILDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGANPFRSIEQINNKLRIPAAAIQVPIGAESELKGVVNIIDRVAIYNEGSNGEK 255          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_CANGA (Elongation factor G, mitochondrial OS=Candida glabrata GN=MEF1 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.275e-73
Identity = 133/195 (68.21%), Postives = 162/195 (83.08%), Query Frame = 3
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ++ ++LRNIGISAHIDSGKTT TER+L+YT RI EIHEVRGRD VGA MD MDLEREKGITIQSAAT C+W      Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGA+P+K ++Q  SKL+   AAVQVP+G E + +G+VDL+ + AYY  G +GE
Sbjct:   62 QNQQKLRNIGISAHIDSGKTTFTERVLYYTKRIKEIHEVRGRDNVGATMDFMDLEREKGITIQSAATYCSWDKDKNSYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGANPFKAIEQLNSKLKLPAAAVQVPIGAESELKGVVDLLDMKAYYNKGDNGE 256          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG2_TREDE (Elongation factor G 2 OS=Treponema denticola GN=fusA2 PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.275e-73
Identity = 131/188 (69.68%), Postives = 161/188 (85.64%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            + ++RNIGISAHIDSGKTTL+ERILFY  RIH +HEVRG+DGVGA MD+M+LE+E+GITIQSA+T   WKDY +N+IDTPGHVDFT+EVER+LRVLDGAILVLCSVGGVQSQSITVDRQ++RY VPR+AF+NK DR GA+P+KV  Q R KL  +   +Q+P+GLED+ +G+VDLV + A YF G +G
Sbjct:    5 ISKMRNIGISAHIDSGKTTLSERILFYCDRIHALHEVRGKDGVGATMDNMELEKERGITIQSASTQVKWKDYTVNVIDTPGHVDFTIEVERSLRVLDGAILVLCSVGGVQSQSITVDRQLKRYHVPRIAFVNKCDRTGANPFKVRMQLREKLGLNAYMMQIPIGLEDKLEGVVDLVTMKAMYFEGENG 192          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_USTMA (Elongation factor G, mitochondrial OS=Ustilago maydis GN=MEF1 PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.665e-73
Identity = 138/213 (64.79%), Postives = 162/213 (76.06%), Query Frame = 3
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK---------------------------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            R RN+GISAHIDSGKTTLTER+LFYTGRI +IHEVRGRD VGAKMD M+LEREKGITIQSAAT C+WK                           D+ INIIDTPGHVDFT+EVERALRVLDGA+LVLC+V GVQSQ+ITVDRQMRRY VPR++FINK+DR GA+PW+V+ Q R+KL+   AAVQ+P+G ED F G++DL++  A Y  G  G
Sbjct:   94 RQRNVGISAHIDSGKTTLTERVLFYTGRIKDIHEVRGRDAVGAKMDHMELEREKGITIQSAATYCSWKATPPTEKASVSGDAANVESKELMEKKQDFHINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYSVPRISFINKMDRAGANPWRVIGQIRNKLKMPAAAVQIPIGAEDDFNGVIDLIRWKAVYNEGHKG 306          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_RAT (Elongation factor G, mitochondrial OS=Rattus norvegicus GN=Gfm1 PE=1 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 2.174e-73
Identity = 131/188 (69.68%), Postives = 160/188 (85.11%), Query Frame = 3
Query:  282 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E++RNIGISAHIDSGKTTLTER+L+YTGRI  +HEV+G+DGVGA MDSM+LER++GITIQSAAT   W+D  INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV RQM+RY VP L FINKLDRMG++P + L Q RSKL H+ A VQ+P+GLE  F+G++DL++  A YF G  G+
Sbjct:   45 EKIRNIGISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFVQIPIGLEGDFKGIIDLIEERAIYFDGDFGQ 232          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_BOTFB5.722e-7467.00Elongation factor G, mitochondrial OS=Botryotinia ... [more]
EFG1_DESPS5.722e-7471.35Elongation factor G 1 OS=Desulfotalea psychrophila... [more]
EFGM_NEMVE7.474e-7472.19Elongation factor G, mitochondrial OS=Nematostella... [more]
EFGM_PONAB9.761e-7469.68Elongation factor G, mitochondrial OS=Pongo abelii... [more]
EFGM_MOUSE9.761e-7470.21Elongation factor G, mitochondrial OS=Mus musculus... [more]
EFGM_KLULA1.275e-7366.84Elongation factor G, mitochondrial OS=Kluyveromyce... [more]
EFGM_CANGA1.275e-7368.21Elongation factor G, mitochondrial OS=Candida glab... [more]
EFG2_TREDE1.275e-7369.68Elongation factor G 2 OS=Treponema denticola GN=fu... [more]
EFGM_USTMA1.665e-7364.79Elongation factor G, mitochondrial OS=Ustilago may... [more]
EFGM_RAT2.174e-7369.68Elongation factor G, mitochondrial OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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