FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_DEBHA (Elongation factor G, mitochondrial OS=Debaryomyces hansenii GN=MEF1 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.174e-73
Identity = 131/195 (67.18%), Postives = 160/195 (82.05%), Query Frame = 3 
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            S  RLRNIG+SAHIDSGKTT TER+LFYTGRI  IHEVRGRD VGA MD MDLEREKGITIQSAAT C+W    KDY  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY +PR+ FINK+DRMG+DP++ ++Q   KL+   AA+QVP+G E + +G+V+++   A Y  GS GE+
Sbjct:   72 SSTRLRNIGVSAHIDSGKTTFTERVLFYTGRIKAIHEVRGRDAVGATMDHMDLEREKGITIQSAATFCSWDKDNKDYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRYNIPRVTFINKMDRMGSDPFRAIEQVNLKLKTPAAAIQVPIGAESELKGVVNIIDRVALYNEGSQGEE 266
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_XENLA (Elongation factor G, mitochondrial OS=Xenopus laevis GN=gfm1 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.840e-73
Identity = 131/188 (69.68%), Postives = 162/188 (86.17%), Query Frame = 3 
Query:  282 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            ER+RNIGISAHIDSGKTTLTER+L+YTGRI  +HEV+G+DGVGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV+RQM+RY VP L FINKLDRMG++P + + Q RSKL H+ A +Q+P+G+E +F+G++DLV+  A YF G  G+
Sbjct:   42 ERIRNIGISAHIDSGKTTLTERVLYYTGRIAHMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPSRAVLQLRSKLNHNAAFIQIPIGVESKFKGIIDLVEERAMYFDGEFGQ 229
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_YEAS7 (Elongation factor G, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.844e-73
Identity = 133/195 (68.21%), Postives = 159/195 (81.54%), Query Frame = 3 
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E   +LRNIGISAHIDSGKTT TER+L+YT RI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMG+DP++ ++Q  SKL+   AAVQ+P+G E    G+VDL+   A Y  G +GE
Sbjct:   65 ERCNKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDNGE 259
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_YEAS6 (Elongation factor G, mitochondrial OS=Saccharomyces cerevisiae (strain AWRI1631) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.844e-73
Identity = 133/195 (68.21%), Postives = 159/195 (81.54%), Query Frame = 3 
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E   +LRNIGISAHIDSGKTT TER+L+YT RI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMG+DP++ ++Q  SKL+   AAVQ+P+G E    G+VDL+   A Y  G +GE
Sbjct:   65 ERCNKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDNGE 259
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_YEAS1 (Elongation factor G, mitochondrial OS=Saccharomyces cerevisiae (strain RM11-1a) GN=MEF1 PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.844e-73
Identity = 133/195 (68.21%), Postives = 159/195 (81.54%), Query Frame = 3 
Query:  273 ESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            E   +LRNIGISAHIDSGKTT TER+L+YT RI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMG+DP++ ++Q  SKL+   AAVQ+P+G E    G+VDL+   A Y  G +GE
Sbjct:   65 ERCNKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDNGE 259
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_PICGU (Elongation factor G, mitochondrial OS=Pichia guilliermondii GN=MEF1 PE=3 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 8.263e-73
Identity = 130/195 (66.67%), Postives = 161/195 (82.56%), Query Frame = 3 
Query:  276 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            S  RLRNIG+SAHIDSGKTT TER+L+YTGRI  IHEVRGRD VGAKMD M+LEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGADP++ ++Q   KL+   AA+QVP+G E + +G+V+++   A Y  G+ GE+
Sbjct:   66 SSSRLRNIGVSAHIDSGKTTFTERVLYYTGRIKAIHEVRGRDAVGAKMDHMELEREKGITIQSAATYCSWDKDDKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGADPFRAIEQINLKLKTPAAAIQVPIGAESELKGVVNIIDRVALYNEGAQGEE 260
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFGM_YEAST (Elongation factor G, mitochondrial OS=Saccharomyces cerevisiae GN=MEF1 PE=1 SV=2)

HSP 1 Score: 273.478 bits (698), Expect = 1.079e-72
Identity = 132/191 (69.11%), Postives = 158/191 (82.72%), Query Frame = 3 
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGE 845
            +LRNIGISAHIDSGKTT TER+L+YT RI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMG+DP++ ++Q  SKL+   AAVQ+P+G E    G+VDL+   A Y  G +GE
Sbjct:   69 KLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATYCSWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAIYNKGDNGE 259
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_BORGA (Elongation factor G 1 OS=Borrelia garinii GN=fusA1 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.409e-72
Identity = 134/186 (72.04%), Postives = 157/186 (84.41%), Query Frame = 3 
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +LRNIGISAHIDSGKTTLTERILFY  +IH IHEV+G+DGVGA MDSM+LERE+GITI SAAT   WKD+ INIIDTPGHVDFT+EVER+LRVLDGAILVL SV GVQSQSITVDRQ++RY VPRLAF+NK D+ GA+P+ V DQ RSKL  +   +Q+P+GLED+  G++DLV + AYYF G  G
Sbjct:    5 KLRNIGISAHIDSGKTTLTERILFYCNKIHAIHEVKGKDGVGATMDSMELERERGITIASAATHVEWKDFPINIIDTPGHVDFTIEVERSLRVLDGAILVLDSVAGVQSQSITVDRQLKRYSVPRLAFVNKCDKTGANPYNVRDQLRSKLDLNSVLMQIPIGLEDKHIGVIDLVLMKAYYFEGKDG 190
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_BORBU (Elongation factor G 1 OS=Borrelia burgdorferi GN=fusA PE=3 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.409e-72
Identity = 134/186 (72.04%), Postives = 157/186 (84.41%), Query Frame = 3 
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +LRNIGISAHIDSGKTTLTERILFY  +IH IHEV+G+DGVGA MDSM+LERE+GITI SAAT   WKD+ INIIDTPGHVDFT+EVER+LRVLDGAILVL SV GVQSQSITVDRQ++RY VPRLAF+NK D+ GA+P+ V DQ RSKL  +   +Q+P+GLED+  G++DLV + AYYF G  G
Sbjct:    5 KLRNIGISAHIDSGKTTLTERILFYCNKIHAIHEVKGKDGVGATMDSMELERERGITIASAATHVEWKDFPINIIDTPGHVDFTIEVERSLRVLDGAILVLDSVAGVQSQSITVDRQLKRYSVPRLAFVNKCDKTGANPYNVKDQLRSKLDLNSVLMQIPIGLEDKHIGVIDLVLMKAYYFEGKDG 190
[Close]
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG1_BORAP (Elongation factor G 1 OS=Borrelia afzelii (strain PKo) GN=fusA1 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.409e-72
Identity = 134/186 (72.04%), Postives = 157/186 (84.41%), Query Frame = 3 
Query:  285 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +LRNIGISAHIDSGKTTLTERILFY  +IH IHEV+G+DGVGA MDSM+LERE+GITI SAAT   WKD+ INIIDTPGHVDFT+EVER+LRVLDGAILVL SV GVQSQSITVDRQ++RY VPRLAF+NK D+ GA+P+ V DQ RSKL  +   +Q+P+GLED+  G++DLV + AYYF G  G
Sbjct:    5 KLRNIGISAHIDSGKTTLTERILFYCNKIHAIHEVKGKDGVGATMDSMELERERGITIASAATHVEWKDFPINIIDTPGHVDFTIEVERSLRVLDGAILVLDSVAGVQSQSITVDRQLKRYSVPRLAFVNKCDKTGANPYNVKDQLRSKLDLNSVLMQIPIGLEDKHIGVIDLVLMKAYYFEGKDG 190
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_DEBHA2.174e-7367.18Elongation factor G, mitochondrial OS=Debaryomyces... [more]
EFGM_XENLA2.840e-7369.68Elongation factor G, mitochondrial OS=Xenopus laev... [more]
EFGM_YEAS74.844e-7368.21Elongation factor G, mitochondrial OS=Saccharomyce... [more]
EFGM_YEAS64.844e-7368.21Elongation factor G, mitochondrial OS=Saccharomyce... [more]
EFGM_YEAS14.844e-7368.21Elongation factor G, mitochondrial OS=Saccharomyce... [more]
EFGM_PICGU8.263e-7366.67Elongation factor G, mitochondrial OS=Pichia guill... [more]
EFGM_YEAST1.079e-7269.11Elongation factor G, mitochondrial OS=Saccharomyce... [more]
EFG1_BORGA1.409e-7272.04Elongation factor G 1 OS=Borrelia garinii GN=fusA1... [more]
EFG1_BORBU1.409e-7272.04Elongation factor G 1 OS=Borrelia burgdorferi GN=f... [more]
EFG1_BORAP1.409e-7272.04Elongation factor G 1 OS=Borrelia afzelii (strain ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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