FC910032

Overview
NameFC910032
Unique NameFC910032
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length857
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_ANAVT (Elongation factor G OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fusA PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.368e-59
Identity = 116/188 (61.70%), Postives = 147/188 (78.19%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGI+AHID+GKTT TERILFY+G IH+I EV     V    D MD ERE+GITI +AA S +WKDYQINIIDTPGHVDFT+EVER++RVLDG I V CSVGGVQ QS TV RQ  RY+VPR+AFINK+DR GA+ ++V +Q R +LR +  A+Q+P+G E+ F+G+VDLV+  AY ++   G
Sbjct:    7 LEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAV---TDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYIYNNDQG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_ANASP (Elongation factor G OS=Anabaena sp. (strain PCC 7120) GN=fusA PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.368e-59
Identity = 116/188 (61.70%), Postives = 147/188 (78.19%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGI+AHID+GKTT TERILFY+G IH+I EV     V    D MD ERE+GITI +AA S +WKDYQINIIDTPGHVDFT+EVER++RVLDG I V CSVGGVQ QS TV RQ  RY+VPR+AFINK+DR GA+ ++V +Q R +LR +  A+Q+P+G E+ F+G+VDLV+  AY ++   G
Sbjct:    7 LEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAV---TDWMDQERERGITITAAAISTSWKDYQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYKVPRIAFINKMDRTGANFYRVHEQMRDRLRANAIAIQLPIGSENDFKGIVDLVRKRAYMYNNDQG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_NOSP7 (Elongation factor G OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=fusA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.048e-59
Identity = 116/188 (61.70%), Postives = 146/188 (77.66%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGI+AHID+GKTT TERILFY+G IH+I EV     V    D M+ ERE+GITI +AA S +WKD+QINIIDTPGHVDFT+EVER++RVLDG I V CSVGGVQ QS TV RQ  RY+VPR+AFINK+DR GA+ +KV +Q R +LR +  A+Q+P+G E+ FQG+VDLV+  AY +    G
Sbjct:    7 LEKVRNIGIAAHIDAGKTTTTERILFYSGIIHKIGEVHEGTAV---TDWMEQERERGITITAAAISTSWKDHQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQAERYKVPRIAFINKMDRTGANFYKVHEQIRDRLRANAIAIQLPIGSENDFQGIVDLVRQRAYIYANDQG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_THIDA (Elongation factor G OS=Thiobacillus denitrificans (strain ATCC 25259) GN=fusA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.513e-58
Identity = 117/190 (61.58%), Postives = 150/190 (78.95%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWK-------DYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYF 827
            +ER RNIGISAHID+GKTT TERILFYTG+ H+I EV   DG  A MD M+ E+E+GITI SAAT+C WK       +++INIIDTPGHVDFT+EVER++RVLDGA +V C+VGGVQ QS TV RQ  +Y VPRLAF+NK+DR GAD +KV +Q R++L+ +   +QVP+G ED+F+G+VDLV++ A Y+
Sbjct:    7 IERYRNIGISAHIDAGKTTTTERILFYTGKSHKIGEVH--DGA-ATMDWMEQEQERGITITSAATTCFWKGMDGKFPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQPQSETVWRQANKYGVPRLAFVNKMDRSGADFFKVYEQMRARLKANPVPIQVPIGAEDKFEGVVDLVKMKAIYW 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_NITSB (Elongation factor G OS=Nitratiruptor sp. (strain SB155-2) GN=fusA PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.581e-58
Identity = 111/181 (61.33%), Postives = 145/181 (80.11%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQL 812
            K  +E++RNIGI+AHID+GKTT TERIL+YTG  H+I EV   +G  A MD MD E+E+GITI SAAT+C WKD+QINIIDTPGHVDFT+EVER++RVLDGA+ V C+VGGVQ QS TV RQ  +Y VPR+ F+NK+DR+GAD + V +Q R +L+ +   +Q+P+G ED F+G+VDLV++
Sbjct:    4 KTPIEKVRNIGIAAHIDAGKTTTTERILYYTGISHKIGEVH--EGA-ATMDWMDQEKERGITITSAATTCFWKDHQINIIDTPGHVDFTIEVERSMRVLDGAVAVFCAVGGVQPQSETVWRQANKYHVPRIVFVNKMDRIGADFYNVENQIRERLKANPVPIQIPIGAEDNFRGVVDLVEM 181          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_THEEB (Elongation factor G OS=Thermosynechococcus elongatus (strain BP-1) GN=fusA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.402e-58
Identity = 113/190 (59.47%), Postives = 146/190 (76.84%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            +ER+RNIGI+AHID+GKTT TERILFY+G +H+I EV     V    D M+ ERE+GITI +AA S +W+D+QINIIDTPGHVDFT+EVER++RVLDG I V CSVGGVQ QS TV RQ  RY VPR+ F+NK+DR GA+ +KV DQ R +LR +   +Q+P+G EDQF+G+VDLV++ A  +    G++
Sbjct:    7 LERVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVHEGTTV---TDWMEQERERGITITAAAISTSWRDHQINIIDTPGHVDFTIEVERSMRVLDGVIAVFCSVGGVQPQSETVWRQADRYSVPRIVFVNKMDRTGANFYKVHDQIRDRLRANAVPIQLPIGAEDQFKGIVDLVRMRAKIYKDDLGKE 193          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_SYNP6 (Elongation factor G OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=fusA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.749e-58
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGI+AHID+GKTT TERILFY+G +H+I EV   DG  A  D M+ ERE+GITI +AA S +WKDY++NIIDTPGHVDFT+EVER++RVLDG + V CSVGGVQ QS TV RQ  RY VPR+ F+NK+DR GAD +KV  Q R ++R +   +Q+P+G E  FQG+VDLV++ A+ +    G
Sbjct:    7 LEKVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVH--DG-NAVTDWMEQERERGITITAAAISTSWKDYRVNIIDTPGHVDFTIEVERSMRVLDGVVAVFCSVGGVQPQSETVWRQADRYSVPRIVFVNKMDRTGADFFKVYGQIRDRVRANAVPIQIPIGAESDFQGIVDLVEMKAHIYTNDLG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_SYNE7 (Elongation factor G OS=Synechococcus elongatus (strain PCC 7942) GN=fusA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.749e-58
Identity = 111/188 (59.04%), Postives = 144/188 (76.60%), Query Frame = 3
Query:  279 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHG 842
            +E++RNIGI+AHID+GKTT TERILFY+G +H+I EV   DG  A  D M+ ERE+GITI +AA S +WKDY++NIIDTPGHVDFT+EVER++RVLDG + V CSVGGVQ QS TV RQ  RY VPR+ F+NK+DR GAD +KV  Q R ++R +   +Q+P+G E  FQG+VDLV++ A+ +    G
Sbjct:    7 LEKVRNIGIAAHIDAGKTTTTERILFYSGVVHKIGEVH--DG-NAVTDWMEQERERGITITAAAISTSWKDYRVNIIDTPGHVDFTIEVERSMRVLDGVVAVFCSVGGVQPQSETVWRQADRYSVPRIVFVNKMDRTGADFFKVYGQIRDRVRANAVPIQIPIGAESDFQGIVDLVEMKAHIYTNDLG 191          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG_NAUPA (Elongation factor G OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=fusA PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.806e-58
Identity = 110/183 (60.11%), Postives = 144/183 (78.69%), Query Frame = 3
Query:  270 KESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTA 818
            K  +  +RNIGI+AHID+GKTT TERIL+YTG  H+I EV   +G  A MD M+ E+E+GITI SAAT+C WKD+QINIIDTPGHVDFT+EVER++RVLDGA+ V C+VGGVQ QS TV RQ  +Y VPR+AF+NK+DR+GAD + V  Q R +L+ +   +Q+P+G ED F+G++DLV++ A
Sbjct:    4 KTPLHMVRNIGIAAHIDAGKTTTTERILYYTGVSHKIGEVH--EGA-ATMDWMEQEKERGITITSAATTCFWKDHQINIIDTPGHVDFTIEVERSMRVLDGAVAVFCAVGGVQPQSETVWRQANKYRVPRIAFVNKMDRIGADFYNVEKQIRERLKANAVPIQIPIGAEDNFKGVIDLVKMKA 183          
BLAST of FC910032 vs. ExPASy Swiss-Prot
Match: EFG2_SYNWW (Elongation factor G 2 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=fusA2 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.853e-57
Identity = 109/187 (58.29%), Postives = 141/187 (75.40%), Query Frame = 3
Query:  288 LRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLDQARSKLRHHCAAVQVPMGLEDQFQGLVDLVQLTAYYFHGSHGEK 848
            +RNIGI AHID+GKTT TERILFY+GR+H++ EV   D   A MD M  E+E+GITI SAAT+C WK Y +NIIDTPGHVDFTVEVER+LRVLDG+I + C+V GVQ QS TV RQ  RY VPR+A+INK+DR+GAD ++V++  R  L     A+Q+P+G+E+ F G++DL+   AY +    GE+
Sbjct:   10 IRNIGIMAHIDAGKTTTTERILFYSGRVHKMGEV---DKGTATMDWMSQEQERGITITSAATACKWKGYFVNIIDTPGHVDFTVEVERSLRVLDGSIGIFCAVAGVQPQSETVWRQADRYHVPRIAYINKMDRVGADFFRVIEMIRKNLSSDAVAIQLPIGVEEAFSGIIDLIDFKAYIYEDESGEQ 193          
The following BLAST results are available for this feature:
BLAST of FC910032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFG_ANAVT1.368e-5961.70Elongation factor G OS=Anabaena variabilis (strain... [more]
EFG_ANASP1.368e-5961.70Elongation factor G OS=Anabaena sp. (strain PCC 71... [more]
EFG_NOSP73.048e-5961.70Elongation factor G OS=Nostoc punctiforme (strain ... [more]
EFG_THIDA1.513e-5861.58Elongation factor G OS=Thiobacillus denitrificans ... [more]
EFG_NITSB2.581e-5861.33Elongation factor G OS=Nitratiruptor sp. (strain S... [more]
EFG_THEEB4.402e-5859.47Elongation factor G OS=Thermosynechococcus elongat... [more]
EFG_SYNP65.749e-5859.04Elongation factor G OS=Synechococcus sp. (strain A... [more]
EFG_SYNE75.749e-5859.04Elongation factor G OS=Synechococcus elongatus (st... [more]
EFG_NAUPA9.806e-5860.11Elongation factor G OS=Nautilia profundicola (stra... [more]
EFG2_SYNWW2.853e-5758.29Elongation factor G 2 OS=Syntrophomonas wolfei sub... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA27CC11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27CC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910032 ID=FC910032; Name=FC910032; organism=Citrus clementina; type=EST; length=857bp
AACAGTACAACAAACCCTCGAACCCCAAACCCTTAAAAAATCTCAGGGTT
TAGGGTTTTAGATAAAAAAAAGCGATGGCTAGATTCCCACGATCTCCAGC
ACCACGTCTCCTCTACACTCTCTTCTCCTCTTCGAGAACGACACCGACCA
AATCCTCACCCCAATCTCCGTCTGCAGCCCTCCTCCAAGGAAACTTCCAC
CTCCAGTCGCGGCAGTTCTCGGCGGGAGGAAACCTCGCACGTGCGAAGGA
TGATAAGGAGCCATGGTGGAAGGAATCAATGGAGCGGCTCCGAAATATCG
GAATCTCGGCGCATATCGATTCCGGAAAAACTACACTAACCGAGCGAATT
CTGTTTTACACTGGACGGATTCACGAGATTCACGAGGTTCGAGGGCGAGA
CGGCGTCGGCGCCAAAATGGATTCTATGGATTTGGAGCGTGAGAAAGGTA
TCACAATTCAGTCAGCCGCCACTAGCTGTGCTTGGAAGGATTACCAGATT
AATATAATTGACACTCCTGGACACGTAGACTTCACAGTTGAAGTAGAAAG
GGCTTTGCGAGTTCTTGATGGCGCAATTCTTGTGCTTTGTAGTGTTGGTG
GCGTGCAAAGTCAATCAATTACCGTTGACCGGCAAATGAGGAGATACGAG
GTGCCAAGGCTGGCTTTCATTAACAAACTTGATAGAATGGGAGCTGATCC
ATGGAAAGTTTTGGATCAGGCAAGGTCTAAGCTGCGGCACCACTGTGCTG
CTGTGCAAGTTCCAATGGGATTGGAAGATCAGTTTCAGGGTCTTGTGGAC
CTTGTGCAGTTAACAGCTTATTATTTTCATGGTTCCCATGGTGAAAAAAA
TTGTCAC
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