FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe GN=SPBC17A3.05c PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.718e-26
Identity = 63/180 (35.00%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  192 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIESDPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKD--FYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            M+ ++++AL+C  + ++ L +G+  +A+KF +K+ R+  +   +D +  IE    T    P A P  + +  +    +                 +T EQ  +V++I K K+  +YEIL ++++CT  +++KSY+KL+L++HPDKN AP A+EAFK VSKAFQ LS+   R  YD TG D
Sbjct:    1 MESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQKLTGSPNPQATPKQE-NKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLLVQKIIKYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMD 179          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC18_BOVIN (DnaJ homolog subfamily C member 18 OS=Bos taurus GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.409e-20
Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  477 YTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY 737
            YTEEQ+  V++IKK +++YEILGV R  + E+++K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +
Sbjct:   66 YTEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTF 152          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC18_MACFA (DnaJ homolog subfamily C member 18 OS=Macaca fascicularis GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.099e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  477 YTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY 737
            Y+EEQ+  V++IKK +++YEILGV R  + E+++K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +
Sbjct:   66 YSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTF 152          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC18_HUMAN (DnaJ homolog subfamily C member 18 OS=Homo sapiens GN=DNAJC18 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.099e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  477 YTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY 737
            Y+EEQ+  V++IKK +++YEILGV R  + E+++K+YRKL+LK HPDKN APGA +AFKA+  AF  LSN + R +YD  G ++  +
Sbjct:   66 YSEEQLLGVQRIKKCRNYYEILGVSRDASDEELKKAYRKLALKFHPDKNCAPGATDAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTF 152          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC18_MOUSE (DnaJ homolog subfamily C member 18 OS=Mus musculus GN=Dnajc18 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20
Identity = 44/87 (50.57%), Postives = 65/87 (74.71%), Query Frame = 3
Query:  477 YTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVY 737
            YTEEQ+  V++IKK +++Y+ILGV  + + E+++K+Y+KL+LK HPDKN APGA EAFKA+  AF  LSN + R +YD  G ++  +
Sbjct:   66 YTEEQLRGVQRIKKCRNYYDILGVSHNASDEELKKAYKKLALKFHPDKNCAPGATEAFKAIGNAFAVLSNPDKRLRYDEYGDEQVTF 152          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: Y5729_DICDI (J domain-containing protein DDB_G0295729 OS=Dictyostelium discoideum GN=DDB_G0295729 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.010e-18
Identity = 55/187 (29.41%), Postives = 95/187 (50.80%), Query Frame = 3
Query:  192 MDGNKDDALKCFKIGKEALESGDRARAIKFLSKARRLDPSLPVDDIISSIES-------------DPNTNPNGPSAEPNSKPSDQSTIRHRXXXXXXXXXXXXXXXXXYTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDI 713
            M+ N++DA+K  ++G+   +  +  +++   +K++RL P+  +D +IS  E+               N N NG S   +  PS  +T                     YT+EQ  I +++  +K  YE L +  +CT  D+++ YR L+  +HPDKNKAP A++AF+ +  A   LS+   RK+YD+
Sbjct:    1 MECNREDAIKAKELGESYFKQQNYTKSLSLFTKSKRLYPTDGIDQLISKAEAFLNNSNSNSNNNNSSNNNNNGNSGNKSYTPSSTTTTA-----------TTATSTLEYTKEQFEISKRVLDSKTHYEKLSLLVNCTDVDIKRQYRALAKLLHPDKNKAPHAQQAFQEIKVANDILSDAIQRKRYDV 176          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: HLJ1_YEAST (Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.487e-17
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  477 YTEEQIAIVRQI--KKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +TE+Q  I  +I  K   +FYEIL V+R  T  +++K+YRKL++K+HPDKN  P A EAFK +++AF+ LSN+E R  YD  G D P  +      AA GF G
Sbjct:    3 FTEDQEKIALEILSKDKHEFYEILKVDRKATDSEIKKAYRKLAIKLHPDKNSHPKAGEAFKVINRAFEVLSNEEKRSIYDRIGRD-PDDRQMPSRGAASGFRG 104          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.487e-17
Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  519 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            T+D+YEILG+ R  T ED++KSYRKL+LK HPD+NK PGAEE FK +S+A+  LS+ E R +YD  G
Sbjct:    4 TRDYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDRFG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 36/66 (54.55%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YEILG+ +  +VED++K+YRKL+L+ HPD+NK PGAEE FK +S+A+  LS+ E R +YD  G
Sbjct:    5 RDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDRFG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein dnaJ OS=Methanosarcina acetivorans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15
Identity = 35/66 (53.03%), Postives = 52/66 (78.79%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YEILG+ +  +VED++K+YRKL+L+ HPD+NK PGAE+ FK +S+A+  LS+ E R +YD  G
Sbjct:    5 RDYYEILGLPKDASVEDIKKTYRKLALQYHPDRNKDPGAEDKFKEISEAYAVLSDTEKRAQYDRFG 70          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
YNF5_SCHPO1.718e-2635.00Uncharacterized J domain-containing protein C17A3.... [more]
DJC18_BOVIN1.409e-2052.87DnaJ homolog subfamily C member 18 OS=Bos taurus G... [more]
DJC18_MACFA4.099e-2051.72DnaJ homolog subfamily C member 18 OS=Macaca fasci... [more]
DJC18_HUMAN4.099e-2051.72DnaJ homolog subfamily C member 18 OS=Homo sapiens... [more]
DJC18_MOUSE9.133e-2050.57DnaJ homolog subfamily C member 18 OS=Mus musculus... [more]
Y5729_DICDI1.010e-1829.41J domain-containing protein DDB_G0295729 OS=Dictyo... [more]
HLJ1_YEAST2.487e-1746.60Protein HLJ1 OS=Saccharomyces cerevisiae GN=HLJ1 P... [more]
DNAJ_METTE2.487e-1759.70Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_METMA1.365e-1554.55Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_METAC3.040e-1553.03Chaperone protein dnaJ OS=Methanosarcina acetivora... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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