FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ2_THET8 (Chaperone protein dnaJ 2 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=dnaJ2 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13
Identity = 32/69 (46.38%), Postives = 51/69 (73.91%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 728
            KD+Y ILGV R+ T E+++++Y++L+ + HPD NK+P AEE FK +++A+  LS+ E R+ YD  G+ E
Sbjct:    5 KDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAEEKFKEINEAYAVLSDPEKRRIYDTYGTTE 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13
Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            KD+YEILGV R+ + E+++K+YR+L  K HPD  K P  EE FK +++A+Q LS+ E RK YD+ G
Sbjct:    7 KDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLSDPEKRKLYDMYG 72          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC16_RAT (DnaJ homolog subfamily C member 16 OS=Rattus norvegicus GN=Dnajc16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.339e-13
Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  492 IAIVRQIKKTKDF--YEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            + ++ Q     DF  Y +LGV R+ +  D++K+Y+KL+ + HPDKNK PGAE+ F  +SKA++ LSN+E R  YD  G
Sbjct:   16 LVLILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRTNYDHYG 93          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y+ILG+      ++++K+YRK++LK HPDKNK P AEE FK +++A+  LS+ + R  YD  G +
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y+ILG+      ++++K+YRK++LK HPDKNK P AEE FK +++A+  LS+ + R  YD  G +
Sbjct:    3 KDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STRR6 (Chaperone protein dnaJ OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +FY+ LGV ++ + ++++K+YRKLS K HPD NK PGAE+ +K V +A++ LS+D+ R  YD  G+            A  GF GF
Sbjct:    5 EFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYGA----------AGANGGFGGF 80          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 31/65 (47.69%), Postives = 49/65 (75.38%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+YE LGV+R+ + ED++++YR+L+ K HPD NK  GAE+ FK +++A++ LS  E+R +YD  G
Sbjct:    4 DYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP4 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.279e-13
Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+Y+ILGV R    ED++++YR+L+ K HPD NK  GAEE FK +++A++ LS+ E+R +YD  G
Sbjct:    3 RDYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRARYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STRPN (Chaperone protein dnaJ OS=Streptococcus pneumoniae GN=dnaJ PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            +FY+ LGV ++ + ++++K+YRKLS K HPD NK PGAE+ +K V +A++ LS+D+ R  YD  G+
Sbjct:    5 EFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRAAYDQYGA 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSS (Chaperone protein dnaJ OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+Y++LGV R  + ++++K+YRKLS K HPD NKAP AE  FK V++A++ LS+ + R  YD  G             A +GF GF
Sbjct:    5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGGFGGGAGAGQGFGGF 91          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ2_THET86.339e-1346.38Chaperone protein dnaJ 2 OS=Thermus thermophilus (... [more]
DNAJ2_AQUAE6.339e-1351.52Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DJC16_RAT6.339e-1344.87DnaJ homolog subfamily C member 16 OS=Rattus norve... [more]
DNJB5_HUMAN8.279e-1345.59DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN8.279e-1345.59DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ_STRR68.279e-1341.86Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_CYAP88.279e-1347.69Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CYAP48.279e-1348.48Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_STRPN1.081e-1246.97Chaperone protein dnaJ OS=Streptococcus pneumoniae... [more]
DNAJ_LACSS1.081e-1242.53Chaperone protein dnaJ OS=Lactobacillus sakei subs... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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