FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACSK (Chaperone protein dnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+Y++LGV R  + ++++K+YRKLS K HPD NKAP AE  FK V++A++ LS+ + R  YD  G             A +GF GF
Sbjct:    5 RDYYDVLGVGRDASDDEIKKAYRKLSKKYHPDINKAPDAEAKFKEVTEAYEALSDPQKRAAYDQYGHAGMNGGFGGGAGAGQGFGGF 91          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            D+Y++LGV ++ + E+++KSYRKL++K HPDKN  PG   AE+ FK VS+A++ LS+ + R+ YD  G D P
Sbjct:    2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKN--PGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGP 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.081e-12
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            KD+YEILGV R+ T E+++++YR+L+ + HPD N  PG   AEE FK +++A++ LS+ E RK YD  G     + P+   + + GF+G
Sbjct:    5 KDYYEILGVPRNATEEEIKRAYRRLAKQYHPDAN--PGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFG--HAAFDPKYGAQGSGGFSG 89          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB9_PONAB (DnaJ homolog subfamily B member 9 OS=Pongo abelii GN=DNAJB9 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 3
Query:  492 IAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            + I   I  +K +Y+ILGV +S +   ++K++ KL++K HPDKNK+P AE  F+ +++A++ LS+   RK+YD  G
Sbjct:   15 LMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLG 90          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB9_HUMAN (DnaJ homolog subfamily B member 9 OS=Homo sapiens GN=DNAJB9 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 3
Query:  492 IAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            + I   I  +K +Y+ILGV +S +   ++K++ KL++K HPDKNK+P AE  F+ +++A++ LS+   RK+YD  G
Sbjct:   15 LMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLG 90          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYWF (Chaperone protein dnaJ OS=Psychrobacter sp. (strain PRwf-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +DFYE+LGV+RS    +++K+YRKL++K HPD+N   P AEE FK  S A++ LS+ E R  YD  G
Sbjct:    4 RDFYEVLGVDRSADEREIKKAYRKLAMKYHPDRNSDDPDAEEKFKEASMAYEVLSDKEKRSAYDRMG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC16_CHICK (DnaJ homolog subfamily C member 16 OS=Gallus gallus GN=DNAJC16 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.412e-12
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  492 IAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            + +  Q    +D Y +LGV RS +  D++K+Y++L+ + HPDKNK PGAE+ F  +SKA++ LSN+E R  +D  G
Sbjct:   17 LLLAAQAAPERDPYRVLGVGRSSSQADIKKAYKRLARQWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFDRYG 92          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.844e-12
Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            KD+YE+LGV R  + E+++KSYRKL++K HPD+N   P AEE+FK   +A++ LS+++ R  YD  G
Sbjct:    4 KDYYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAEESFKEAKEAYEVLSDEQKRAAYDQYG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP6 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 29/65 (44.62%), Postives = 48/65 (73.85%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+Y++LGV R    ++++++YR+L+ K HPD NK PGAE+ FK +++A++ LS  E+R +YD  G
Sbjct:    4 DYYQLLGVARDADKDEIKRAYRRLARKYHPDVNKEPGAEDKFKEINRAYEVLSEPETRARYDQFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_MYXXA (Chaperone protein dnaJ OS=Myxococcus xanthus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            D+Y+ LGV+RS + EDV+K+YRKL+ K HPD N     AEE FK VS AF+ LS+   RK YD  G D
Sbjct:    4 DYYQTLGVDRSASAEDVKKAYRKLARKYHPDVNPGNKAAEEKFKQVSAAFEVLSDTRKRKLYDEFGPD 71          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ_LACSK1.081e-1242.53Chaperone protein dnaJ OS=Lactobacillus sakei GN=d... [more]
DNAJ_CHLAB1.081e-1248.61Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_ANATD1.081e-1242.70Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNJB9_PONAB1.412e-1240.79DnaJ homolog subfamily B member 9 OS=Pongo abelii ... [more]
DNJB9_HUMAN1.412e-1240.79DnaJ homolog subfamily B member 9 OS=Homo sapiens ... [more]
DNAJ_PSYWF1.412e-1250.75Chaperone protein dnaJ OS=Psychrobacter sp. (strai... [more]
DJC16_CHICK1.412e-1243.42DnaJ homolog subfamily C member 16 OS=Gallus gallu... [more]
DNAJ_METSS1.844e-1249.25Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_SYNP62.409e-1244.62Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_MYXXA2.409e-1254.41Chaperone protein dnaJ OS=Myxococcus xanthus GN=dn... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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