FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METFK (Chaperone protein dnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YE+LGV R  T E+++K+YRKL++K HPD+N   P AEE FK   +A++ LS+D+ R  YD  G
Sbjct:    4 RDYYEVLGVNRDATDEEIKKAYRKLAMKYHPDRNPDNPKAEEHFKEAKEAYEVLSDDQKRAAYDQYG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 31/65 (47.69%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+YEILGV R    ++++++YR+L+ K HPD NK  GAEE FK +++A++ LS  E+R +YD  G
Sbjct:    4 DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-12
Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YEILGV R+ T E+++K+YRKL+ K HPD NK  P A E FK +++A++ LS+ E R +YD  G
Sbjct:    3 RDYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQFG 69          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 3
Query:  519 TKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYD---ITGSDEPVYQPRTHTRAARGFNGF 782
            +KD+YEILGV R    ++++K+YR+L+ K HPD NK  P AEE FK +S+A++ LS+ + R +YD     G +E  +       A RGF GF
Sbjct:    4 SKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDF--NFEDFAQRGFGGF 93          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_GLOVI (Chaperone protein dnaJ OS=Gloeobacter violaceus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D YE L V R  + ED++++YRKL+ + HPD NK  GAE+ FK +S+A++ LS+D+ R +YD  G
Sbjct:    3 RDLYETLNVSRDASKEDIKRAYRKLARQYHPDVNKDAGAEDTFKELSRAYEVLSDDDQRARYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_ERYRH (Chaperone protein dnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +DFYEILGV +S T  +++K+YR+L+ K HPD NK  GAE  FK V +A++ LS+ + R  YD  G
Sbjct:    5 RDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRANYDQFG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            KDFYE+LGVE+     +++K++RKL+LK HPDKN     AEE FK +++A+Q LS+ + R +YD  G+ +             GF+GF
Sbjct:    4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTAD-------FNGGGAGFSGF 84          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 32/71 (45.07%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            +D+YE+LG+ +    ++++K+YRKL++K HPD+N  PG   AEE FK +++A++ LS+D  RK YD  G D
Sbjct:    5 RDYYEVLGISKGAEAQEIKKAYRKLAMKYHPDRN--PGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHD 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            D+Y++LGV ++ + E+++K+YRKL++K HPDKN  PG   AE+ FK VS+A++ LS+ + R+ YD  G D P
Sbjct:    2 DYYDVLGVSKTASPEEIKKAYRKLAVKYHPDKN--PGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_BRECH (Chaperone protein dnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +    ++++K+YRKL+ + HPD NKA  AEE FK V +A+  LS  + R +YD  G  +P
Sbjct:    3 RDYYEVLGVGKGADADEIKKAYRKLARQYHPDVNKAADAEEKFKEVKEAYDVLSEPQKRAQYDRFGHQDP 72          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ_METFK2.409e-1249.25Chaperone protein dnaJ OS=Methylobacillus flagella... [more]
DNAJ_CYAP72.409e-1247.69Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CARHZ2.409e-1250.75Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
DNAJ_HALOH3.146e-1243.48Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_GLOVI3.146e-1246.97Chaperone protein dnaJ OS=Gloeobacter violaceus GN... [more]
DNAJ_ERYRH3.146e-1250.00Chaperone protein dnaJ OS=Erysipelothrix rhusiopat... [more]
DNAJ_CLOTE3.146e-1242.05Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_CLOD63.146e-1245.07Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
DNAJ_CHLFF3.146e-1247.22Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_BRECH3.146e-1244.29Chaperone protein dnaJ OS=Brevibacillus choshinens... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
back to top