FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.146e-12
Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+Y+ LGV R    ++++++YR+L+ K HPD NK PGAEE FK +++A++ LS  E R++YD  G
Sbjct:    4 DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PROMP (Chaperone protein dnaJ OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            DFY+ILGV R      ++ +YRKL+ + HPD NK PGAE+ FK + KA++ L++ E+R +YD  G
Sbjct:    3 DFYQILGVSRDADANTLKSAYRKLARQYHPDVNKDPGAEDKFKEIGKAYEALADPETRARYDQFG 67          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PICTO (Chaperone protein dnaJ OS=Picrophilus torridus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 38/88 (43.18%), Postives = 58/88 (65.91%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFN 776
            KD+Y ILGV+R+ + +D++K++R+L+ K HPD N  PG   AEE FK +++A++ LS+ + RK+YD TG+        T   A  GFN
Sbjct:    3 KDYYAILGVDRNASQDDIKKAFRELAKKYHPDAN--PGNKEAEEKFKEIAEAYEVLSDPQKRKQYDETGT--------TDFNAGSGFN 80          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+YE+L V+R+ + E+++K+YRKL+LK HPD+N   P AEE FK +++A+Q LS++E R  YD  G
Sbjct:    5 DYYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKRALYDQYG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBB (Chaperone protein dnaJ OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            KD+YE+LG+++  + ++++K++RKL++K HPDKNK    AEE FK +++A+Q LS+ E +  YD  GS
Sbjct:    4 KDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGS 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOBA (Chaperone protein dnaJ OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            KD+YE+LG+++  + ++++K++RKL++K HPDKNK    AEE FK +++A+Q LS+ E +  YD  GS
Sbjct:    4 KDYYEVLGLQKGASDDEIKKAFRKLAIKYHPDKNKGNTEAEEKFKEINEAYQVLSDPEKKSNYDQFGS 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPN (Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            D+Y ILG+ ++ + E+++K+YRKL++K HPDKN     AE+ FK VS+A++ LS+ + R  YD  G D P
Sbjct:    2 DYYSILGISKTASAEEIKKAYRKLAVKYHPDKNPGDAAAEKRFKEVSEAYEVLSDPQKRDSYDRFGKDGP 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 34/72 (47.22%), Postives = 53/72 (73.61%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            D+Y++LGV ++ + E+++KSYRKL++K HPDKN  PG   AE+ FK VS+A++ LS+ + R+ YD  G + P
Sbjct:    2 DYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKN--PGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKNGP 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein dnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            KD+YEILGV R+ T E+++++YR+L+ + HPD N  PG   AEE FK +++A++ LS+ E R+KYD  G     + P T+     GF+G
Sbjct:    5 KDYYEILGVPRNATQEEIKRAYRRLAKQYHPDAN--PGNKEAEEKFKEINEAYEVLSDPEKRRKYDQFG--HAAFDP-TYGAQGGGFSG 88          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.109e-12
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+YE+LG+ +  + ++++K+YR+L+ K HPD +K   A E FK V +A++ LS+D+ R +YD  G          H  A +GF GF
Sbjct:    4 RDYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFG----------HAGANQGFGGF 80          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ1_SYNY33.146e-1246.15Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]
DNAJ_PROMP4.109e-1247.69Chaperone protein dnaJ OS=Prochlorococcus marinus ... [more]
DNAJ_PICTO4.109e-1243.18Chaperone protein dnaJ OS=Picrophilus torridus GN=... [more]
DNAJ_NITSB4.109e-1250.00Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_CLOBB4.109e-1245.59Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_CLOBA4.109e-1245.59Chaperone protein dnaJ OS=Clostridium botulinum (s... [more]
DNAJ_CHLPN4.109e-1245.71Chaperone protein dnaJ OS=Chlamydia pneumoniae GN=... [more]
DNAJ_CHLCV4.109e-1247.22Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]
DNAJ_CALS84.109e-1243.82Chaperone protein dnaJ OS=Caldicellulosiruptor sac... [more]
DNAJ_BACCR4.109e-1237.93Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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