FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LYSSC (Chaperone protein dnaJ OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15
Identity = 32/70 (45.71%), Postives = 55/70 (78.57%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LG+ +S T ++++K+YRKLS + HPD NK PGA+E FK +++A++ LS+D+ + +YD  G ++P
Sbjct:    4 RDYYEVLGLTKSATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YEILGV ++ T ++++K+YRKLS + HPD NKAP A E FK + +A++ LS+DE R +YD  G  +P       T    GF G
Sbjct:    4 RDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADP-----NETFGGGGFQG 84          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y ILG+++  T EDV+K+YRK +LK HPDKNK+P AEE FK V++A++ LS+ + R+ YD  G +
Sbjct:    3 KDYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_BACST (Chaperone protein dnaJ OS=Bacillus stearothermophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.773e-15
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+YEILGV ++ T E+++K+YRKLS K HPD NK P A E FK + +A++ LS+D+ R  YD  G  +P           +GF GF
Sbjct:    4 RDYYEILGVSKNATKEEIKKAYRKLSKKYHPDVNKEPDAAEKFKEIKEAYEVLSDDQKRAHYDQFGQADP----------NQGFGGF 80          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOTN (Chaperone protein dnaJ OS=Geobacillus thermodenitrificans (strain NG80-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.846e-15
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV ++ T ++++K+YRKLS + HPD NKAP A E FK + +A++ LS+DE R +YD  G  +P
Sbjct:    4 RDYYEVLGVSKNATKDEIKKAYRKLSKQYHPDINKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.846e-15
Identity = 35/68 (51.47%), Postives = 53/68 (77.94%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KDFY+ILG+ER  + ++++K+YRKL+LK HPDKNK+P AEE FK +++A++ LS+ + R  +D  G D
Sbjct:    3 KDFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGED 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YE+LG+ +  + ++++K+YRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG 83          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YE+LG+ +  + ++++K+YRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG 83          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YE+LG+ +  + ++++K+YRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG 83          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YE+LG+ +  + ++++K+YRKLS K HPD NK  GA+E FK +S+A++ LS+D  R  YD  G D P           +GFNG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGP------QGFGGQGFNG 83          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ_LYSSC3.040e-1545.71Chaperone protein dnaJ OS=Lysinibacillus sphaericu... [more]
DNAJ_GEOKA3.040e-1545.35Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNJB4_MOUSE6.773e-1552.94DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNAJ_BACST6.773e-1544.83Chaperone protein dnaJ OS=Bacillus stearothermophi... [more]
DNAJ_GEOTN8.846e-1548.57Chaperone protein dnaJ OS=Geobacillus thermodenitr... [more]
DNAJ1_DROME8.846e-1551.47DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNAJ_STAAW1.155e-1443.02Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAT1.155e-1443.02Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAS1.155e-1443.02Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR1.155e-1443.02Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
back to top