FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJ27A_XENLA (DnaJ homolog subfamily C member 27-A OS=Xenopus laevis GN=dnajc27-A PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 31/64 (48.44%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  477 YTEEQIAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKA 668
            +T+EQ   +R+I+  KD +++LGV+   T ++V K+YRKL++ +HPDK  APG+E+AFKAV  A
Sbjct:  201 FTKEQADSIRRIRNCKDSWDMLGVKPGATRDEVNKAYRKLAVLLHPDKCMAPGSEDAFKAVVNA 264          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_THENN (Chaperone protein dnaJ OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 33/80 (41.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  513 KKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN--KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG--SDEPVYQ 740
            ++ KD+YEILGV R+ T E++RK+Y++L  + HPD++      AE+ FK + +A++ LS+ + R  YD  G   ++PVYQ
Sbjct:    3 REKKDYYEILGVPRNATQEEIRKAYKRLVKEWHPDRHPENRKEAEQRFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPVYQ 82          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_THEAC (Chaperone protein dnaJ OS=Thermoplasma acidophilum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 33/70 (47.14%), Postives = 53/70 (75.71%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPD---KNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            KD+Y+ILGV+R+ T E+++K++R+L+ K HPD   +NK   AEE FK +S+A++ LS+ + R+ YD TG+
Sbjct:    3 KDYYKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQE-AEEKFKEISEAYEVLSDPQKRRMYDQTGT 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT2 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            ++Y+ LG+ +  + ++++++YRKLS K HPD NK PGAEE +K + +A++ LS+ + R  YD  G D
Sbjct:    5 EYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPD 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STRT1 (Chaperone protein dnaJ OS=Streptococcus thermophilus (strain CNRZ 1066) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            ++Y+ LG+ +  + ++++++YRKLS K HPD NK PGAEE +K + +A++ LS+ + R  YD  G D
Sbjct:    5 EYYDRLGLSKDASQDEIKRAYRKLSKKYHPDINKEPGAEEKYKEILEAYETLSDAQKRAAYDQYGPD 71          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEFS (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain SBW25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YE+LGVER  +  D++K+YR+L++K HPD+N  +  +EE FK  ++A++CLS+   R  YD  G
Sbjct:    4 RDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDSKESEEMFKEANEAYECLSDPNKRAAYDQYG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNK-APGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YE LGV R+ +  D++K++R+L++K HPD+NK  P AEE FK+V +A+  LS+ + R  YD  G
Sbjct:    4 EDYYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCR (Chaperone protein dnaJ OS=Ehrlichia chaffeensis (strain Arkansas) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+Y++LGV +S T E+++K+YRK++LK HPDKN  PG   AEE FK +S+A+  L + + R  YD  G
Sbjct:    5 DYYDLLGVSKSATPEEIKKAYRKMALKYHPDKN--PGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYG 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDK--NKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD Y ILGV R+   ++++K+YRKLS+K HPD+  N    AEE FK ++KA++ LS+ + R  YD  G D
Sbjct:    4 KDLYAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFD 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.749e-11
Identity = 29/70 (41.43%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDE 728
            KD+YEILG+++  + +D++K++RKL+LK HPD+N     AEE FK +++A+Q L++ + + +YD  G+ +
Sbjct:    4 KDYYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKKAEEKFKEINEAYQVLTDPQKKAQYDQFGTTD 73          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DJ27A_XENLA5.933e-1148.44DnaJ homolog subfamily C member 27-A OS=Xenopus la... [more]
DNAJ_THENN7.749e-1141.25Chaperone protein dnaJ OS=Thermotoga neapolitana (... [more]
DNAJ_THEAC7.749e-1147.14Chaperone protein dnaJ OS=Thermoplasma acidophilum... [more]
DNAJ_STRT27.749e-1141.79Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_STRT17.749e-1141.79Chaperone protein dnaJ OS=Streptococcus thermophil... [more]
DNAJ_PSEFS7.749e-1144.78Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_METCA7.749e-1146.27Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_EHRCR7.749e-1148.53Chaperone protein dnaJ OS=Ehrlichia chaffeensis (s... [more]
DNAJ_DICNV7.749e-1147.14Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_CLOK57.749e-1141.43Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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