FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y ILG+E+  + ED++K+YRK +LK HPDKNK+P AEE FK V++A++ LS+ + R+ YD  G +
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y ILG+E+  + ED++K+YRK +LK HPDKNK+P AEE FK V++A++ LS+ + R+ YD  G +
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.361e-14
Identity = 36/73 (49.32%), Postives = 54/73 (73.97%), Query Frame = 3
Query:  516 KTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG---AEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            K K++YE LGV+  CT ++++K+YRK+++K HPDKN+ PG   AE  FK +S+A++ LS+ E RK YD  GS+
Sbjct:    3 KEKEYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSE 75          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            KD+Y+ILGV +  + ++++K+YRKLS K HPD NKAP AE+ FK V++A++ L + + R +YD  GS +P
Sbjct:    5 KDYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRAQYDQFGSADP 74          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_MICAN (Chaperone protein dnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 34/65 (52.31%), Postives = 48/65 (73.85%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+YEILGV R    ED++++YR+L+ K HPD NK PGAEE FK +++A++ LS  E+R +YD  G
Sbjct:    4 DYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC16_PONAB (DnaJ homolog subfamily C member 16 OS=Pongo abelii GN=DNAJC16 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 40/96 (41.67%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  492 IAIVRQIKKTKDF--YEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG--SDEPVYQPRTHTRAAR 767
            + ++ QI    DF  Y++LGV R+ +  D++K+Y+KL+ + HPDKNK PGAE+ F  +SKA++ LSN+E R  YD  G   +   YQ +   R  R
Sbjct:   16 LVLILQILSALDFDPYKVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYR 111          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAS1 (Chaperone protein dnaJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS++  R  YD  G D P
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAA5 (Chaperone protein dnaJ OS=Cyanothece sp. (strain ATCC 51142) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 32/65 (49.23%), Postives = 51/65 (78.46%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            D+Y+ILGV+R+ + ED++++YR+L+ K HPD NK PGAEE FK +++A++ LS  ++R +YD  G
Sbjct:    4 DYYDILGVDRNASKEDLKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPDTRSRYDQFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSU (Chaperone protein dnaJ OS=Bacillus subtilis GN=dnaJ PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +S + ++++K+YRKLS K HPD NK  G++E FK V +A++ LS+D+ R  YD  G  +P
Sbjct:    4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYDQFGHTDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DJC16_HUMAN (DnaJ homolog subfamily C member 16 OS=Homo sapiens GN=DNAJC16 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.734e-14
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  492 IAIVRQIKKTKDF--YEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG--SDEPVYQPRTHTRAAR 767
            + ++ QI    DF  Y +LGV R+ +  D++K+Y+KL+ + HPDKNK PGAE+ F  +SKA++ LSN+E R  YD  G   +   YQ +   R  R
Sbjct:   16 LVLILQILSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQYGDAGENQGYQKQQQQREYR 111          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNJB4_PONAB3.361e-1451.47DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN3.361e-1451.47DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA1_DICDI3.361e-1449.32DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ_PEDPA4.390e-1448.57Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]
DNAJ_MICAN4.390e-1452.31Chaperone protein dnaJ OS=Microcystis aeruginosa (... [more]
DJC16_PONAB4.390e-1441.67DnaJ homolog subfamily C member 16 OS=Pongo abelii... [more]
DNAJ_STAS15.734e-1447.14Chaperone protein dnaJ OS=Staphylococcus saprophyt... [more]
DNAJ_CYAA55.734e-1449.23Chaperone protein dnaJ OS=Cyanothece sp. (strain A... [more]
DNAJ_BACSU5.734e-1447.14Chaperone protein dnaJ OS=Bacillus subtilis GN=dna... [more]
DJC16_HUMAN5.734e-1441.67DnaJ homolog subfamily C member 16 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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