FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 34/68 (50.00%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            KD+Y ILG+E+  + ED++K+YRK +L+ HPDKNK+P AEE FK V++A++ LS+ + R+ YD  G +
Sbjct:    3 KDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQAEERFKEVAEAYEVLSDPKKREIYDQFGEE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 3
Query:  525 DFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            DFYEILGV R C  ++++++YR+L+ + HPD NK PGAEE FK +++A++ LS  E+R +YD  G
Sbjct:    4 DFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +  + ++++K+YRKLS K HPD N+  GAEE FK +S+A++ LS++  R  YD  G D P
Sbjct:    4 RDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQEEGAEEKFKEISEAYEVLSDENKRANYDQFGHDGP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAVT (Chaperone protein dnaJ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            +D+YEILGV R    E+++++YR+L+ K HPD NK PGAEE FK +++A++ LS  E+R +YD  G +
Sbjct:    3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_ANASP (Chaperone protein dnaJ OS=Anabaena sp. (strain PCC 7120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.488e-14
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            +D+YEILGV R    E+++++YR+L+ K HPD NK PGAEE FK +++A++ LS  E+R +YD  G +
Sbjct:    3 RDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPE 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJB (Chaperone protein dnaJ OS=Synechococcus sp. GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 32/66 (48.48%), Postives = 51/66 (77.27%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YEILGV R  + E+++++YR+L+ K HPD NK PGAEE FK +++A++ LS++E + +YD  G
Sbjct:    3 RDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKARYDRFG 68          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 32/70 (45.71%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 32/70 (45.71%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+Y+ILGV +  + +D++++YR+L+ K HPD N  PGAEE FK +++A++ LS+ + R +YD  GS  P           +GF GF
Sbjct:    4 QDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGP------QGAGGQGFGGF 84          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+Y+ILGV +  + +D++++YR+L+ K HPD N  PGAEE FK +++A++ LS+ + R +YD  GS  P           +GF GF
Sbjct:    4 QDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGP------QGAGGQGFGGF 84          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNJB4_BOVIN7.488e-1450.00DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNAJ_SYNP27.488e-1450.77Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_STACT7.488e-1447.14Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_ANAVT7.488e-1448.53Chaperone protein dnaJ OS=Anabaena variabilis (str... [more]
DNAJ_ANASP7.488e-1448.53Chaperone protein dnaJ OS=Anabaena sp. (strain PCC... [more]
DNAJ_SYNJB9.780e-1448.48Chaperone protein dnaJ OS=Synechococcus sp. GN=dna... [more]
DNAJ_LISMF9.780e-1445.71Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC9.780e-1445.71Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LACRJ9.780e-1440.23Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACRD9.780e-1440.23Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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