FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LGV +S + ++++K+YRKLS K HPD NK  GA E FK V +A++ LS+D+ R  YD  G  +P
Sbjct:    4 RDYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNG 779
            +D+YE+LG+ +  + ++++K+YRKLS K HPD NK  GA+E FK +S+A++ LS+D  R   D  G D P           +GFNG
Sbjct:    4 RDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRATIDQFGHDGP------QGFGGQGFNG 83          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            +D+YEILG+++S + ++++K+YRKL+ K HPD NK   A E FK V +A++ LS+D+ R +YD  G   P          ++GF GF
Sbjct:    4 RDYYEILGIDKSASQDEIKKNYRKLARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQFGHSGP---------QSQGFGGF 81          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LG+ +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LG+ +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LG+ +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 31/70 (44.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEP 731
            +D+YE+LG+ +S + ++++K+YRKLS + HPD NK  GA+E FK +S+A++ LS+ + R +YD  G  +P
Sbjct:    4 RDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDP 73          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACCB (Chaperone protein dnaJ OS=Lactobacillus casei (strain BL23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            KD+YE LGV R    + +RK++RKLS K HPD N APGAE+ FK +++A+Q LS+ + R  YD  GS +    P+    A  G  GF
Sbjct:    5 KDYYETLGVSRDADDDTIRKAFRKLSKKYHPDLNHAPGAEQKFKDINEAYQVLSDPQKRAAYDQYGSAD---GPQGFGGAGAGQGGF 88          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACC3 (Chaperone protein dnaJ OS=Lactobacillus casei (strain ATCC 334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 40/87 (45.98%), Postives = 54/87 (62.07%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGSDEPVYQPRTHTRAARGFNGF 782
            KD+YE LGV R    + +RK++RKLS K HPD N APGAE+ FK +++A+Q LS+ + R  YD  GS +    P+    A  G  GF
Sbjct:    5 KDYYETLGVSRDADDDTIRKAFRKLSKKYHPDLNHAPGAEQKFKDINEAYQVLSDPQKRAAYDQYGSAD---GPQGFGGAGAGQGGF 88          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLPD (Chaperone protein dnaJ OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 34/67 (50.75%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            KD+YE+LG+ RS T ++++K+YRKL+++ HPDKN     AEE FK V++A++ LSND+ R++YD  G
Sbjct:    3 KDYYEVLGLSRSATKDEIKKAYRKLAMQYHPDKNPDNKDAEEHFKEVNEAYEALSNDDKRRRYDQFG 69          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ_BACLD9.780e-1448.57Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]
DNAJ_STAAU1.277e-1341.86Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]
DNAJ_OCEIH1.277e-1341.38Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_LISW61.277e-1344.29Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_LISMO1.277e-1344.29Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_LISMH1.277e-1344.29Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN1.277e-1344.29Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_LACCB1.277e-1345.98Chaperone protein dnaJ OS=Lactobacillus casei (str... [more]
DNAJ_LACC31.277e-1345.98Chaperone protein dnaJ OS=Lactobacillus casei (str... [more]
DNAJ_CHLPD1.277e-1350.75Chaperone protein dnaJ OS=Chlorobium phaeobacteroi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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