FC910033

Overview
NameFC910033
Unique NameFC910033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length782
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.277e-13
Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            KD+YE+LGV RS + ++++K+YRKL+L+ HPDKN     AEE FK V++A++ LSND+ R++YD  G
Sbjct:    3 KDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YEILGV RS   ++++K+YRKL+LK HPDKN     AEE FK V++A++ LSND+ R++YD  G
Sbjct:    3 RDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: CBPA_COXBU (Curved DNA-binding protein OS=Coxiella burnetii GN=cbpA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            +D+Y+ILGV R  T ++++KSYRKL+ K HPD +  P AEE FK V +A++ L + E RK YD  GS
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGS 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: CBPA_COXBR (Curved DNA-binding protein OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=cbpA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            +D+Y+ILGV R  T ++++KSYRKL+ K HPD +  P AEE FK V +A++ L + E RK YD  GS
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGS 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: CBPA_COXBN (Curved DNA-binding protein OS=Coxiella burnetii (strain Dugway 5J108-111) GN=cbpA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.668e-13
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            +D+Y+ILGV R  T ++++KSYRKL+ K HPD +  P AEE FK V +A++ L + E RK YD  GS
Sbjct:    4 QDYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYDAIGS 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKN-KAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            KD+YEILGV RS   ++++K+YRKL+LK HPDKN     AE+ FK V++A++ LSND+ R++YD  G
Sbjct:    3 KDYYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPG-AEEAFKAVSKAFQCLSNDESRKKYDITG 719
            +D+YE+LGV RS T ++++K+YRKL++K HPDKN     AEE FK  ++A++ LSND+ R++YD  G
Sbjct:    3 RDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFG 69          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNAJ_LACPL (Chaperone protein dnaJ OS=Lactobacillus plantarum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.179e-13
Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 3
Query:  522 KDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITGS 722
            +D Y++LGVE+  + ++++K+YRKLS K HPD N  PGAEE FKAV++A++ L + + R +YD  GS
Sbjct:    4 QDLYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRAQYDQFGS 70          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: YR260_MIMIV (DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R260 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  513 KKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKA-PGAEEAFKAVSKAFQCLSNDESRKKYDITGSD 725
            K++ D YEILG+  S + ED++K+YRKL++K HPDKNK  P AEE FK ++ A   LSN E R+ YD  G +
Sbjct:    3 KESTDLYEILGLTPSASEEDIKKAYRKLAIKYHPDKNKGNPEAEEMFKKINHANSILSNSEKRRVYDQYGEE 74          
BLAST of FC910033 vs. ExPASy Swiss-Prot
Match: DNJB9_RAT (DnaJ homolog subfamily B member 9 OS=Rattus norvegicus GN=Dnajb9 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = 3
Query:  492 IAIVRQIKKTKDFYEILGVERSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRKKYDITG 719
            + I   I  +K++Y+ILGV +S +   ++K++ KL++K HPDKNK+P AE  F+ +++A++ LS+   RK+YDI G
Sbjct:   15 LMITELILASKNYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDIIG 90          
The following BLAST results are available for this feature:
BLAST of FC910033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 287
Match NameE-valueIdentityDescription
DNAJ_CHLL21.277e-1352.24Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]
DNAJ_CHLTE1.668e-1353.73Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
CBPA_COXBU1.668e-1350.75Curved DNA-binding protein OS=Coxiella burnetii GN... [more]
CBPA_COXBR1.668e-1350.75Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
CBPA_COXBN1.668e-1350.75Curved DNA-binding protein OS=Coxiella burnetii (s... [more]
DNAJ_PROVI2.179e-1353.73Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]
DNAJ_PROA22.179e-1350.75Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_LACPL2.179e-1349.25Chaperone protein dnaJ OS=Lactobacillus plantarum ... [more]
YR260_MIMIV2.846e-1351.39DnaJ-like protein R260 OS=Acanthamoeba polyphaga m... [more]
DNJB9_RAT2.846e-1342.11DnaJ homolog subfamily B member 9 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA15AG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA15AG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910033 ID=FC910033; Name=FC910033; organism=Citrus clementina; type=EST; length=782bp
CTTCTCCTCCTTACCCTCAACTTACGACACCACCCCCTGAATCCTTGAAC
CCCTCAAATTCAAATTCTTATGTCAGATCCATTATATTAACACTATTATG
ATTCGCAATCGGCAATAAATTAGGATTAGGGTTTGTGATATTTATATATA
TATTGTGTTATTTGTTCTTGTGTGGTTTTTCAATTTTCATCATGGATGGG
AATAAAGATGACGCCTTGAAATGTTTCAAAATCGGCAAAGAAGCGCTAGA
ATCAGGCGATCGAGCGCGTGCGATCAAATTTCTGTCCAAGGCTCGCCGCC
TCGATCCTTCTCTTCCGGTTGACGACATCATCTCATCCATCGAGTCCGAC
CCCAACACAAACCCTAACGGCCCGTCCGCAGAGCCCAATTCAAAGCCGTC
CGATCAATCGACGATCCGACACCGGGGCCCATCAACTGGCGCGTCTCCGT
CAGCTTCTTCTTCGACCTCTCCGGCGTACACCGAAGAGCAAATCGCGATC
GTGAGACAGATTAAGAAAACGAAAGATTTTTACGAAATCCTAGGGGTTGA
AAGATCTTGTACGGTCGAAGATGTACGGAAATCTTATAGAAAATTATCGC
TGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCGCCGAAGAAGCCTTT
AAAGCGGTATCAAAGGCGTTTCAGTGTTTGAGCAACGATGAGAGTCGGAA
AAAATATGATATTACTGGGTCAGATGAGCCCGTTTATCAGCCACGGACTC
ATACTCGGGCCGCCCGTGGGTTTAACGGGTTT
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