FC910038

Overview
NameFC910038
Unique NameFC910038
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length844
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y1071_ORYSJ (Putative B3 domain-containing protein Os10g0537100 OS=Oryza sativa subsp. japonica GN=Os10g0537100 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.007e-15
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 3
Query:  672 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQS-------------GSTSKGLLLNFEDVTGKVWRFR 842
            ++ +FEK VTPSDVGKLNRLVIPKQHAE++FPL +             G   KGL+L+FED TGK WRFR
Sbjct:   31 KEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFR 100          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y1160_ORYSJ (B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica GN=Os11g0156000 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.424e-15
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3
Query:  672 RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSG-STSKGLLLNFEDVTGKVWRFR 842
            ++ +FEK +TPSDVGKLNRLVIPKQHAE++FPL +G +  KGL+L+FED  G  WRFR
Sbjct:   34 KEHMFEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFR 91          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.301e-14
Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 3
Query:  237 GVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF------KQMSCAGT-----SSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDEL 560
            G  ++ +K  SS+YKG+  +P GRW A+I +  K  RVWLGTFN  EEAARAYD+ A+R RG  A  NF      K+ + A T      + E D+++A +SS   S  +D L +    D L
Sbjct:   12 GSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTL 132          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: NGA4_ARATH (B3 domain-containing transcription factor NGA4 OS=Arabidopsis thaliana GN=NGA4 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.101e-13
Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 3
Query:  609 IKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFR 842
            I+    D     + S+R    R+ +F+K +TPSDVGKLNRLVIPKQHAE  FPL+      G +L+F+D  GK+WRFR
Sbjct:   10 IRASSSDHTNYFYSSER----REHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLE--DNQNGTVLDFQDKNGKMWRFR 81          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y8577_ORYSJ (Putative B3 domain-containing protein Os08g0157700 OS=Oryza sativa subsp. japonica GN=Os08g0157700 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.325e-13
Identity = 44/111 (39.64%), Postives = 59/111 (53.15%), Query Frame = 3
Query:  516 EIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKA--RDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFR 842
            ++ +   +    +E EQ+       A     +  G   GV    G   V+ A  R+ +F+K VTPSDVGKLNRLV+PKQHAE+ FP    + + G  L FED  G  WRFR
Sbjct:   13 QVEEATEEEEEEEEEEQALGQEPAPAAAAAALVLGRRHGVVVGGGGGGVVVAAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFP----AAAAGTQLCFEDRAGTPWRFR 119          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.077e-12
Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 3
Query:  138 PITFPASIPPTKSP---ESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 443
            P  F A+  P  S      +  VGS  +   ++S    E  S++   ++Y+G+  +P G+W A+I +  K  R WLGTF+  EEAARAYD AA+R RG  A  NF +
Sbjct:   79 PFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: Y6078_ORYSJ (B3 domain-containing protein Os06g0107800 OS=Oryza sativa subsp. japonica GN=Os06g0107800 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 41/80 (51.25%), Postives = 51/80 (63.75%), Query Frame = 3
Query:  615 HGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPL--QSGSTSKGLLLNFEDVTG--KVWRFR 842
            HG G G     G +R    R+ +FEK VTPSDVGKLNRLV+PK +AEK+FPL   + ++  G +L FED  G    WRFR
Sbjct:   21 HGGGGGGG---GGER----REYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFR 93          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  177 PESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 443
            P S  RV S  + +          E+R+    +Y+GV  +P G+W A+I + H+  RVWLGTF+  E AARAYD AA RFRG  A  NF +
Sbjct:   45 PSSFARVDSSHNPIEESMSKAFPEEARE-KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPE 134          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  273 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSS 467
            +Y+GV  +P GR+ A+I +  K +RVWLG+FN  EEAARAYD AA RFRG  A TNF  +   G SS
Sbjct:   52 RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLIGYYGISS 118          
BLAST of FC910038 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.682e-11
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 3
Query:  210 SSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 443
            S+V  + E+ +  E  K    KY+GV  +P G+W A+I + H+  RVWLGTF   E AARAYD AA RFRG  A  NF +
Sbjct:   43 SAVTKECESSMSLERPK----KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118          
The following BLAST results are available for this feature:
BLAST of FC910038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y1071_ORYSJ2.007e-1558.57Putative B3 domain-containing protein Os10g0537100... [more]
Y1160_ORYSJ3.424e-1565.52B3 domain-containing protein Os11g0156000 OS=Oryza... [more]
ERF73_ARATH1.301e-1441.32Ethylene-responsive transcription factor ERF073 OS... [more]
NGA4_ARATH1.101e-1350.00B3 domain-containing transcription factor NGA4 OS=... [more]
Y8577_ORYSJ9.325e-1339.64Putative B3 domain-containing protein Os08g0157700... [more]
RAP22_ARATH2.077e-1238.32Ethylene-responsive transcription factor RAP2-2 OS... [more]
Y6078_ORYSJ1.759e-1151.25B3 domain-containing protein Os06g0107800 OS=Oryza... [more]
EF110_ARATH3.000e-1142.86Ethylene-responsive transcription factor ERF110 OS... [more]
ERF77_ARATH5.117e-1155.22Ethylene-responsive transcription factor 10 OS=Ara... [more]
RAP26_ARATH6.682e-1147.50Ethylene-responsive transcription factor RAP2-6 OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22CB02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22CB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910038 ID=FC910038; Name=FC910038; organism=Citrus clementina; type=EST; length=844bp
ACACAATTCAGCATCTCTCTCTTTCTTTCTTGTACCAGAACCTCTTGTAG
ACACACATAACACACATGAAAAGAGAAGAAATGGACGGAAGTTGCATGGA
CGAAAGCACGACAACTGATTCAGCATCAACATCCCCGCCAATAACTTTCC
CTGCGAGCATCCCGCCGACCAAGTCGCCGGAGAGTCTTTGCCGAGTCGGC
AGCGGAGCCTCCAGCGTGATTCTCGACTCGGAAGCCGGCGTGGAGGCCGA
GTCGAGGAAGCTCCCGTCTTCCAAATACAAAGGGGTGGTCCCACAGCCGA
ATGGGAGGTGGGGCGCCCAGATATACGAGAAGCACCAAAGGGTCTGGCTC
GGCACCTTCAACGAGGAAGAGGAAGCTGCCAGGGCCTACGATATCGCTGC
GCAGCGTTTCCGCGGACGCGATGCCGTCACAAACTTCAAGCAAATGTCTT
GTGCTGGAACGTCCTCCGACGAGGGTGATATCGAAATGGCGTTCTTGAGC
TCCCACTCCAAGTCCGAGATCGTCGATATGCTGAGGAAGCACACTTACAA
CGACGAGCTCGAGCAGAGCAAAAGAAACTACGGCCTCGATGCCAACGGCA
AGCGTGTAATCAAACACGGGGAAGGTGATGGTGTTGCCACTGCCTTCGGT
TCGGACCGGGTCCTTAAAGCGCGTGACCAGCTTTTTGAAAAGGCCGTTAC
CCCGAGTGACGTGGGGAAGCTGAACCGGCTCGTGATACCCAAGCAGCACG
CGGAGAAGCACTTCCCTTTACAGAGCGGAAGCACTTCCAAGGGACTGCTC
TTGAACTTTGAGGATGTCACCGGCAAAGTTTGGAGGTTTAGGTA
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