FC910047

Overview
NameFC910047
Unique NameFC910047
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length882
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRPC (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRPB (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRP8 (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M18 GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRP6 (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M6 GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRP3 (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M3 GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRP1 (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M1 GN=argS PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRPM (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M28 GN=argS PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHSVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRPD (Arginyl-tRNA synthetase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=argS PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCY---DAKDTNNKNAKTMSVMYADSPEKKVAL 604
            HV+FG+V    G  +STRKG VI L  ++ +  N       + E K   + D EA A  +G+ AI   D      NGY+FD+E M SFEG+TGPY+QYAHAR+ S+ RK++   S  A   +SL  A E  E+++ +  +P +   T    EP  +  +   ++++ +  Y      D N++    +++ YA +   K AL
Sbjct:  359 HVAFGLVTKG-GAKLSTRKGNVILLEPTVAEAIN---RAASQIEAKNPNLADKEAVAHSVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGPYVQYAHARIQSILRKADFTPS--ATTTYSLADA-ESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAHTRILDDNSERDNRLALCYATATVLKEAL 552          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_CLOBA (Arginyl-tRNA synthetase OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=argS PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22
Identity = 71/227 (31.28%), Postives = 120/227 (52.86%), Query Frame = 2
Query:    5 CGHVSFGMVKDPKGQTMSTRKGTVISLADSL-DDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682
            C HV FG+VK    + +STRKG V+ L D + + V   +  + +KN +    +++ E  A  +G+ AI+             FD + + SFEG+TGPY+QY++AR  S+  ++E   SE+   D+S +++KE  ELV+ LA + +         EP  +  Y+  ++K+ +  Y+A           SV+  D    K   + L +S+  V+ NG++LLG+  VE+M
Sbjct:  355 CVHVGFGLVKFAD-RKLSTRKGEVVLLDDLIRESVEKTLEVINEKNPE----LENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGPYVQYSYARANSIISRAENISSEV---DYSKLSSKEEFELVKVLANFNNQIKLATDKLEPSILTRYVIDVAKSFNKFYNAH----------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563          
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR2_BACHD (Arginyl-tRNA synthetase 2 OS=Bacillus halodurans GN=argS2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.324e-22
Identity = 71/227 (31.28%), Postives = 119/227 (52.42%), Query Frame = 2
Query:    2 KCGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSE-LDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGL-TPVE 676
            +C H++FG+++   G+ MSTR+G V+ L D L+DV       +K+    +  + +    A+ +G+ A++  D         NF +E   SFEG+TGPY+QY +AR+ S+ RK + L+DS   + D+  +T  EG  L++ L Q+P+V     + +EP  +  Y+  +SK  +  Y              V+ AD    + A + L E    V+A+ M +LG+ TP E
Sbjct:  351 QCEHITFGLLR-LDGKKMSTRRGRVVMLEDVLNDVVAHAKAKIKEKHPNHPHLHE---VAEAVGVGAVIFGDLKQDRRLDVNFRLEDALSFEGETGPYVQYTYARIQSILRKGDKLNDSR--HMDWQHVTKDEGWSLLKVLIQYPNVLIKATEAREPHQLARYVLTVSKKFNQFYH-----------KYVILADDETVRQARLILAERTGEVIADAMAVLGVKTPEE 560          
The following BLAST results are available for this feature:
BLAST of FC910047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
SYR_STRPC3.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRPB3.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRP83.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRP63.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRP33.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRP13.121e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRPM4.076e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_STRPD4.076e-2233.83Arginyl-tRNA synthetase OS=Streptococcus pyogenes ... [more]
SYR_CLOBA5.324e-2231.28Arginyl-tRNA synthetase OS=Clostridium botulinum (... [more]
SYR2_BACHD5.324e-2231.28Arginyl-tRNA synthetase 2 OS=Bacillus halodurans G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA56BF02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA56BF02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910047 ID=FC910047; Name=FC910047; organism=Citrus clementina; type=EST; length=882bp
CAAGTGCGGTCACGTTTCTTTCGGCATGGTCAAGGACCCCAAGGGCCAGA
CCATGAGCACTCGCAAGGGCACTGTCATCTCGCTCGCCGACAGCCTGGAC
GATGTGCACAACTTCATGCACGATGTCATGAAGAAGAACGAAGACAAGTA
CAAGCAGGTCCAGGACCCCGAGGCAACTGCCGACATTCTCGGCATTTCCG
CCATCATGGTGCAGGACTTCAGCGGCAAGATGGCCAACGGCTACAACTTC
GACATGGAGCGCATGACCTCCTTCGAGGGCGACACTGGTCCCTACCTGCA
GTACGCACACGCCCGCCTGTGCTCCATGAAGCGCAAGTCCGAGCTCGATG
ACTCTGAACTCGCCAACGCCGACTTCAGCCTCATCACGGCCAAGGAGGGC
ATCGAGCTCGTCCGCACCCTCGCACAGTGGCCCGACGTCTTCACCAACAC
ACTCAAGACCCAGGAGCCCGTCACCGTCCTCACCTACCTGTTCAAGATGT
CCAAGGCTCTCAGCTCGTGCTACGACGCTAAGGACACCAACAATAAGAAC
GCGAAGACCATGAGTGTCATGTACGCAGACAGCCCCGAGAAGAAGGTTGC
TCTCATGGGCCTGTACGAGAGCGCTAGGATTGTGTTGGCCAACGGCATGA
AGCTGCTCGGTCTCACTCCTGTGGAGAGGATGTAAAAGGGCAGACCGGCA
GTGAGGGATTCAGAAACAAAAGTACGGGACTGGGGAAGACCGAAAGACGA
CTTCCCGGTCATGGCTAAATGTCAGGGACAGCGACGATAAGCTCTCTCTG
GTCCAGCATAGCACATTTGCCGAGGGACGGCCGGGCAGCAACACGCATGT
AATCTACGGTATGTGGGAAAGCTGTCTGCGTG
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