FC910047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHELP (Arginyl-tRNA synthetase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=argS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.451e-21 Identity = 73/226 (32.30%), Postives = 116/226 (51.33%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMK-KNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSM-KRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D L + ++++ KN D ++ + A ++GI+++ D S A+ Y F E+M SFEG+T PYL YA+ R+ + KR +E+D L A L KE EL LAQ+ +V + +P + YLF+++ A SS Y+A V+ ADS ++K + + L + L G+ LLG+ +ERM Sbjct: 372 HMGFGTMNGEDGRPFKTRSGGVVKLVDLLSEAETRALELVRSKNPDMDEE--ELAKIAKVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRAAEID---LTGASIKLEHDKEK-ELGNKLAQFAEVLGRMVAKGQPHALCGYLFELAGAFSSFYEA----------CPVLAADSEDEKKSRLLLAQLTAKTLKQGLDLLGIETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHEHH (Arginyl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=argS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.451e-21 Identity = 69/224 (30.80%), Postives = 115/224 (51.34%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D L + D+++ + + E A ++GI+++ D S A+ Y F E+M SFEG+T PYL YA+ R+ + ++++ D +L++A L KE +L LAQ+ +V T + +P + YLF+++ A SS Y+A V+ A++ E K + + L + L G+ LLGL +ERM Sbjct: 372 HMGFGTMNGEDGRPFKTRSGGVVKLIDLLKEADTRALDLVRSKNPDMDEAELAEI-ARVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRAQ--DVDLSDATIILEHEKEK-DLGTKLAQFGEVMTRMVGKGQPHALCGYLFELAGAFSSFYEA----------CPVLAAETEESKKSRLLLSQLTAKTLKQGLNLLGLETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_CLOAB (Arginyl-tRNA synthetase OS=Clostridium acetobutylicum GN=argS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21 Identity = 66/226 (29.20%), Postives = 113/226 (50.00%), Query Frame = 2 Query: 5 CGHVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 C HV +G+V+ +G+ +STR G VI L D L + +++ E+K ++ + E + +GI A++ FD + M SFEG+TGPY+QY++AR S+ RK N + + + E +L++ L + N + EP + Y+ +++KA + Y+A + +N E K A + L E+A IV+ N + L+G+ VE M Sbjct: 355 CIHVGYGLVRFAEGK-LSTRNGDVIFLEDLLKESVQKTSEII---EEKNPELDNKEEVSRKVGIGAVIFTYLKNGRERDIIFDWKEMLSFEGETGPYVQYSYARAKSILRKL---GEVKGNVSYDKLVSAEEFDLIKQLKGFNGAILNAIDRLEPSVITRYVIEVAKAFNKFYNAYNISN----------TSDEELKNARLALVEAASIVIKNALSLIGIDVVEEM 563
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_ALKMQ (Arginyl-tRNA synthetase OS=Alkaliphilus metalliredigens (strain QYMF) GN=argS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21 Identity = 62/224 (27.68%), Postives = 119/224 (53.12%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+SFG V +G+ + +RKG+V+ L + L+ + +++ E+K V++ E A +GI AI+ D S +F + SFEG+TGPY+QY HAR S+ RK+E+ ++ NA + +T + +++T+ Q+P V + + EP + ++ +++A + Y + + E K+A + + ++ + VL+ G+ L+G+ E+M Sbjct: 360 HISFGRVTH-EGRRIQSRKGSVVLLEEVLNGAVERISEII---EEKNPNVENKEQVAKDVGIGAIVFNDLSNNRIKDISFSWDTAFSFEGETGPYVQYTHARASSVLRKAEVAITDHINA--AHLTDDVTMNVIKTIEQFPQVIVDAQRKNEPSIITRHIVNIAQAFNRFYHDHP-----------ILVEDEELKMARLAVVQAVKQVLSVGLSLIGIKAPEKM 566
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHESM (Arginyl-tRNA synthetase OS=Shewanella sp. (strain MR-4) GN=argS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21 Identity = 67/224 (29.91%), Postives = 114/224 (50.89%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D LD+ + ++++ + E A ++GISA+ D S + Y F E+M SFEG+T PYL YA+ R+ + +++ D +L+ A L KE +L LAQ+ ++ + + +P + YL++++ A SS Y+A V+ AD+ E+K + + L + L G+ LLG+ +ERM Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLVDLLDEANTRALELVRSKNPDMDEATLAEI-ARVVGISAVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQAKIVLEHEKEK-DLGNKLAQFGEILSRVIDKGQPHVLCGYLYELAGAFSSFYEA----------CPVLAADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHEON (Arginyl-tRNA synthetase OS=Shewanella oneidensis GN=argS PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21 Identity = 67/224 (29.91%), Postives = 114/224 (50.89%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D LD+ + ++++ + E A ++GISA+ D S + Y F E+M SFEG+T PYL YA+ R+ + +++ D +L+ A L KE +L LAQ+ ++ + + +P + YL++++ A SS Y+A V+ AD+ E+K + + L + L G+ LLG+ +ERM Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLVDLLDEANTRALELVRSKNPDMDEATLAEI-ARVVGISAVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDVDLSQAKIVLEHEKEK-DLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEA----------CPVLAADNDEQKHSRLLLSQLTASTLQKGLNLLGIETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHESR (Arginyl-tRNA synthetase OS=Shewanella sp. (strain MR-7) GN=argS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 67/224 (29.91%), Postives = 114/224 (50.89%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D LD+ + ++++ + E A ++GISA+ D S + Y F E+M SFEG+T PYL YA+ R+ + +++ D +L+ A L KE +L LAQ+ ++ + + +P + YL++++ A SS Y+A V+ AD+ E+K + + L + L G+ LLG+ +ERM Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLVDLLDEANTRALELVRSKNPDMDEATLAEI-ARVVGISAVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQAKIVLEHEKEK-DLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEA----------CPVLAADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_SHESA (Arginyl-tRNA synthetase OS=Shewanella sp. (strain ANA-3) GN=argS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 67/224 (29.91%), Postives = 114/224 (50.89%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + G+ TR G V+ L D LD+ + ++++ + E A ++GISA+ D S + Y F E+M SFEG+T PYL YA+ R+ + +++ D +L+ A L KE +L LAQ+ ++ + + +P + YL++++ A SS Y+A V+ AD+ E+K + + L + L G+ LLG+ +ERM Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLVDLLDEANTRALELVRSKNPDMDEATLAEI-ARVVGISAVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVAGIFKRA--TDIDLSQAKIVLEHEKEK-DLGNKLAQFGEILSRVVDKGQPHVLCGYLYELAGAFSSFYEA----------CPVLAADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_ALCBS (Arginyl-tRNA synthetase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=argS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.688e-21 Identity = 69/226 (30.53%), Postives = 113/226 (50.00%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEAT--ADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 H+ FG + P G+ TR G + L D LD+ ++ ++K Q+ D E A +GI A+ D S ++ Y F+ E+M SFEG+T PYL YA+ R+ S+ RK+ELD + + + DF L+ L L Q+ +V N +P + YL+ ++ SS Y+ ++ ++ + + + L L +GM+LLGL+P+ERM Sbjct: 374 HMGFGTMNGPDGRPFKTRDGGTVKLVDLLDEAEQRAFALV---QEKNPQLDDEELRNIARSVGIGAVKYADLSKNRSSDYIFNFEQMLSFEGNTAPYLLYAYTRVASVFRKAELDMANV-SGDF-LLNEDAEHTLAARLVQFGEVLQNVADKGQPHLLSAYLYDVAGLFSSFYE----------HCPILSSEDERIRQSRLKLAALTARTLKHGMELLGLSPLERM 584
BLAST of FC910047 vs. ExPASy Swiss-Prot
Match: SYR_STRZT (Arginyl-tRNA synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=argS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.004e-20 Identity = 65/224 (29.02%), Postives = 113/224 (50.45%), Query Frame = 2 Query: 11 HVSFGMVKDPKGQTMSTRKGTVISLADSLDDVHNFMHDVMKKNEDKYKQVQDPEATADILGISAIMVQDFSGKMANGYNFDMERMTSFEGDTGPYLQYAHARLCSMKRKSELDDSELANADFSLITAKEGIELVRTLAQWPDVFTNTLKTQEPVTVLTYLFKMSKALSSCYDAKDTNNKNAKTMSVMYADSPEKKVALMGLYESARIVLANGMKLLGLTPVERM 682 HV FG+V +G+ +STRKG VI L ++ + + + E K ++++ + A +GI AI D NGY+FD+E M SFEG+TGPY+QYA+AR+ S+ RK++ N + E E+++ + +P + EP + + ++++ + Y + + +SPE+ L Y +A +VL ++LLG+ E+M Sbjct: 359 HVPFGLVTK-EGKKLSTRKGNVILLEPTVAEA---VSRAKVQIEAKNPELENKDQVAHAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGPYVQYAYARIQSILRKADFKPETAGNYS---LNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFNKYY-----------AHTRILDESPERDSRLALSYATA-VVLKEALRLLGVEAPEKM 563 The following BLAST results are available for this feature:
BLAST of FC910047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 373
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Sequences
The
following sequences are available for this feature:
EST sequence >FC910047 ID=FC910047; Name=FC910047; organism=Citrus clementina; type=EST; length=882bpback to top |