FC910050

Overview
NameFC910050
Unique NameFC910050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length928
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3123 contig Ccv1_Contig3123:1..928. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: STUB_DROME (Serine proteinase stubble OS=Drosophila melanogaster GN=Sb PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 53/163 (32.52%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGY--TFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIR-VAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL-YTAADDPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+GG  A  G +P   ++      G+  T  CGGALI+  ++ TA HC+D+L  I    +R+G  +            R VA+ + HPKY+      D+AL++L   ++++P++SP CL  T +    +  TVTGWGR+++   + S VL + +V  V    C
Sbjct:  544 IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDL-LISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPS-VLQEVSVPIVSNDNC 704          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRC_BOVIN (Chymotrypsin-C OS=Bos taurus GN=CTRC PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 49/148 (33.11%), Postives = 69/148 (46.62%), Query Frame = 3
Query:  426 PPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETD-----IRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRM 848
            P L+  ++GG+ A    +P   +L Y RDN +   CGG LI+  +VLTAAHCI N             V +G N    E +     + V     H K+      NDIAL++L+ T++ S  +  ACL              VTGWGR+
Sbjct:   24 PNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYR--------VALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELSDTIQVACLPEEGSLLPQDYPCFVTGWGRL 163          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTR2_ANOGA (Chymotrypsin-2 OS=Anopheles gambiae GN=CHYM2 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 43/160 (26.88%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDI-RVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            ++GG++A  G  P+  +L      G+  +CGG+L++  +VLTAAHC+   E  +  ++      +G N+     ++ +V + + H +Y R + +NDI L+RL   +Q+S  +        A      + +TGWGR +   ++ + +L   NV  +   +C
Sbjct:   33 VVGGEVAKNGSAPYQVSLQVP---GWGHNCGGSLLNNRWVLTAAHCLVGYEPSDLMVL------VGTNSLKEGGELLKVDKLLYHSRYNRPQFHNDIGLMRLEQPVQFSELVQSVEYLEKAVPVNATVRLTGWGRTSTNGNVPT-LLQSLNVVTLSNEDC 182          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: TMPS9_MOUSE (Transmembrane protease, serine 9 OS=Mus musculus GN=Tmprss9 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 49/162 (30.25%), Postives = 78/162 (48.15%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPRECA 923
            I+GG  A  GEFP   +L   R+N   F CG  +I   ++++AAHC +  +       + G V + G+  +A    RV +  KHP Y       D+A+L L+  + +   + PACL  A     P  +  ++GWG + +   +K  VL KA V  +    C+
Sbjct:  205 IVGGVEAAPGEFPWQVSL---RENHEHF-CGATIIGARWLVSAAHCFNEFQDPAQWAAQAGSVHLSGSEASA-VRTRVLRIAKHPAYDADTADFDVAVLELARPLPFGRYVQPACLPAATHVFPPGKKCLISGWGYLKEDFLVKPEVLQKATVELLDQSLCS 361          

HSP 2 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRV--ELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+GG  A  GE P  A+L      G    CG  ++   ++L+AAHC  N  ++E     LG V + G    +   + + +   HP+Y       D+ALL L+  + ++  + P CL  A     V  +  ++GWG M +    K ++L KA+V  +  + C
Sbjct:  506 IVGGISAVSGEVPWQASL----KEGPRHFCGATVVGDRWLLSAAHCF-NHTKVEQVQAHLGTVSLLGVG-GSPVKLGLRRVALHPRYNPGILDFDVALLELAQPLVFNKYIQPVCLPLAIHKFPVGRKCMISGWGNMQEGNATKPDILQKASVGIIEQKMC 660          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: KLKB1_RAT (Plasma kallikrein OS=Rattus norvegicus GN=Klkb1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 52/176 (29.55%), Postives = 85/176 (48.30%), Query Frame = 3
Query:  405 KIVDST--IPPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRV--ELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            K+V+S+     +   I+GG  ++ GE+P   +L  +  +     CGG++I   ++LTAAHC D +   +   +  G++ +     N      + + I H KY   E   DIAL++L + + Y+    P CL + AD   +     VTGWG   + R    N+L KA +  V   EC
Sbjct:  376 KVVESSDCTTKINARIVGGTNSSLGEWPWQVSLQVKLVS-QNHMCGGSIIGRQWILTAAHCFDGIPYPDVWRIYGGILNLS-EITNKTPFSSIKELIIHQKYKMSEGSYDIALIKLQTPLNYTEFQKPICLPSKADTNTIYTNCWVTGWGYTKE-RGETQNILQKATIPLVPNEEC 548          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: ESSPL_HUMAN (Epidermis-specific serine protease-like protein OS=Homo sapiens GN=ESSPL PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 49/167 (29.34%), Postives = 82/167 (49.10%), Query Frame = 3
Query:  426 PPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVE--LTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            P  +  ++GG  A  G +P   +L ++    + F CGG+L+S   +LTAAHCI          V LG + +G +         V++ + HPKY  Q+   D+ALL+LSS + ++  + P CL +      +     VTGWG++ +      + L +A V  +  + C
Sbjct:   34 PVYSSRVVGGQDAAAGRWPWQVSLHFD----HNFICGGSLVSERLILTAAHCIQPTWTTFSYTVWLGSITVGDS--RKRVKYYVSKIVIHPKY--QDTTADVALLKLSSQVTFTSAILPICLPSVTKQLAIPPFCWVTGWGKVKEN---YHSALQEAEVPIIDRQAC 189          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRC_RAT (Chymotrypsin-C OS=Rattus norvegicus GN=Ctrc PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 48/145 (33.10%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  426 PPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCI--DNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRM 848
            P L+  ++GG+ A    +P   +L Y +D+ +   CGG+LI+T++VLTAAHCI  D   R+      L V +  G+ + AE D        H K+ R   +NDIA+++L+  ++ S  +  AC+              VTGWGR+
Sbjct:   24 PNLSTRVVGGEDAVPNSWPWQVSLQYLKDDTWRHTCGGSLITTSHVLTAAHCINKDFTYRVGLGKYNLTVEDEEGSVY-AEVD----TIYVHEKWNRLFLWNDIAIIKLAEPVELSNTIQVACIPEEGSLLPQDYPCYVTGWGRL 163          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: FA10_MOUSE (Coagulation factor X OS=Mus musculus GN=F10 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.340e-13
Identity = 53/166 (31.93%), Postives = 80/166 (48.19%), Query Frame = 3
Query:  438 LHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELT-----VTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            + I+GG     GE P  A L  E + G+   CGG +++  Y+LTAAHC+    R +  +      +  GN    E D+     IKH K+ R     DIA+LRL + I +  N++PACL          +T     V+G+GR ++ +  +SN+L    V  V    C
Sbjct:  230 VRIVGGRECKDGECPWQALLINEDNEGF---CGGTILNEFYILTAAHCLHQARRFKVRVGDRNTEKEEGNEMVHEVDV----VIKHNKFQRDTYDYDIAVLRLKTPITFRMNVAPACLPQKDWAESTLMTQKTGIVSGFGRTHE-KGRQSNILKMLEVPYVDRNTC 387          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: KLKB1_HUMAN (Plasma kallikrein OS=Homo sapiens GN=KLKB1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRV--ELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+GG  ++ GE+P   +L  +        CGG+LI   +VLTAAHC D L   +   +  G++ +     +     ++ + I H  Y   E  +DIAL++L + + Y+    P CL +  D   +     VTGWG   +  +I+ N+L K N+  V   EC
Sbjct:  391 IVGGTNSSWGEWPWQVSLQVKL-TAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILNLSDITKDTPFS-QIKEIIIHQNYKVSEGNHDIALIKLQAPLNYTEFQKPICLPSKGDTSTIYTNCWVTGWGFSKEKGEIQ-NILQKVNIPLVTNEEC 548          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: GRAF_MOUSE (Granzyme F OS=Mus musculus GN=Gzmf PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 54/161 (33.54%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL--YTAADDPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            IIGG        P+MA + + +DNG    CGG L+   +VLTAAHC  +  R     V LG   I       +  I VA+AI HP Y  ++  +DI LL+L S  + +  + P  L    A   P    +V GWGR +     +S+ L +A +     +EC
Sbjct:   21 IIGGHEVKPHSRPYMARVRFVKDNGKRHSCGGFLVQDYFVLTAAHCTGSSMR-----VILGAHNIRAKE-ETQQIIPVAKAIPHPAYDDKDNTSDIMLLKLESKAKRTKAVRPLKLPRPNARVKPGHVCSVAGWGRTSINATQRSSCLREAQLIIQKDKEC 175          
The following BLAST results are available for this feature:
BLAST of FC910050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
STUB_DROME3.717e-1332.52Serine proteinase stubble OS=Drosophila melanogast... [more]
CTRC_BOVIN3.717e-1333.11Chymotrypsin-C OS=Bos taurus GN=CTRC PE=1 SV=2[more]
CTR2_ANOGA3.717e-1326.88Chymotrypsin-2 OS=Anopheles gambiae GN=CHYM2 PE=2 ... [more]
TMPS9_MOUSE4.854e-1330.25Transmembrane protease, serine 9 OS=Mus musculus G... [more]
KLKB1_RAT4.854e-1329.55Plasma kallikrein OS=Rattus norvegicus GN=Klkb1 PE... [more]
ESSPL_HUMAN4.854e-1329.34Epidermis-specific serine protease-like protein OS... [more]
CTRC_RAT4.854e-1333.10Chymotrypsin-C OS=Rattus norvegicus GN=Ctrc PE=1 S... [more]
FA10_MOUSE6.340e-1331.93Coagulation factor X OS=Mus musculus GN=F10 PE=1 S... [more]
KLKB1_HUMAN8.280e-1330.43Plasma kallikrein OS=Homo sapiens GN=KLKB1 PE=1 SV... [more]
GRAF_MOUSE8.280e-1333.54Granzyme F OS=Mus musculus GN=Gzmf PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22CB05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910050 ID=FC910050; Name=FC910050; organism=Citrus clementina; type=EST; length=928bp
CGACAAGGAAAATCGTGAGATATGGTGCGGTGTTGTGCCTCGAAATAAGT
TTATTTTAAACGTGAATAAATATATGTTCGGTATAAACCTAGACCGGCTT
TGTTTTAATCCTAATAATGCTTTTTGAAGTTGGTGCGCTTTTGTGTCTTG
TTAATTTGGCGTCTTCGAAATATGTGGGCGATTCGTGCCGGCTGCCCGGG
AATGCTGAAAATGGAACTTGCAGCATTGTGGAAGACTGCCCCGTCGCTGT
CAGGTCCCTCAAGGAGCATAGAAAGCATTCTTTGCCTAGATGCGGGTTTC
TAGATCATTCCGAAATTGTTTGCTGTCCACTGGAAACTGTGAATAAATAT
GATACAGACACCACAGCAACCAGGTCTCAAAGAATAGCTGACCGAGAATG
CAAGAAAATTGTTGATTCCACAATACCGCCGTTGACCTTGCATATTATTG
GCGGCGACATAGCTACTCAGGGAGAATTTCCTCATATGGCAGCACTTGGC
TATGAGAGGGACAACGGGTACACATTCGACTGCGGTGGAGCTCTCATCTC
AACCACGTACGTGTTGACCGCGGCCCACTGCATCGACAATTTAGAGAGGA
TAGAACCCACTATAGTGCGTCTCGGAGTCGTGGAGATCGGCGGCAACGCC
TTCAACGCCGAGACCGACATCCGCGTGGCGCAAGCCATCAAACACCCAAA
GTACACAAGGCAGGAGAAATACAATGACATCGCACTTTTAAGGCTAAGCA
GTACTATCCAGTACAGTCCTAACCTGAGCCCGGCGTGCCTGTACACGGCC
GCGGACGACCCGCGCGTCGAGCTCACCGTCACCGGCTGGGGCCGCATGAA
CGACACCAGAGACATAAAGAGCAACGTGCTGTTGAAAGCGAACGTGACGG
CGGTGGGCCCGCGCGAGTGCGCGCCGCA
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