FC910050

Overview
NameFC910050
Unique NameFC910050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length928
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3123 contig Ccv1_Contig3123:1..928. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CEL2A_BOVIN (Chymotrypsin-like elastase family member 2A OS=Bos taurus GN=CELA2A PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.280e-13
Identity = 48/149 (32.21%), Postives = 72/149 (48.32%), Query Frame = 3
Query:  420 TIPPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVR--LGVVEIGGNAFNAETDIRVAQAIKHPKYTRQE--KYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRM 848
            T PP    ++GG+ A    +P   +L Y     +   CGG+LI   +VLTAAHCI +       + R  L  VE G         I V++++ H K+   +  + NDIALL+L+S++  +  +   CL  A           VTGWGR+
Sbjct:   21 TYPPQLSRVVGGEDARPNSWPWQVSLQYSSSGQWRHTCGGSLIEQNWVLTAAHCISSSRTYRVVVGRQSLSTVESG------SLTIAVSKSVIHEKWNSNQLAQGNDIALLKLASSVPLTDKIQLGCLPAAGTILPNNYVCYVTGWGRL 163          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: TRY3_CHICK (Trypsin II-P29 OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQA----IKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+GG    +   P+  +L    ++GY F CGG+LI++ +VL+AAHC  +  RI+   VRLG   I     + + D  V ++    I+HPKY+     NDI L++L+S ++YS ++ P  L ++      E  ++GWG           +L   N   +  +EC
Sbjct:   26 IVGGYTCPEHSVPYQVSL----NSGYHF-CGGSLINSQWVLSAAHCYKS--RIQ---VRLGEYNI-----DVQEDSEVVRSSSVIIRHPKYSSITLNNDIMLIKLASAVEYSADIQPIALPSSCAKAGTECLISGWGNTLSNGYNYPELLQCLNAPILSDQEC 173          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: BSSP4_HUMAN (Brain-specific serine protease 4 OS=Homo sapiens GN=PRSS22 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCI-DNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQE-KYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRMND 854
            ++GG+ +T  E+P + ++   + NG T  C G+L+++ +V+TAAHC  DNL +     V LG  ++ GN  +    + VA    HP Y+ +E    DIAL+RL  +IQ+S  + P CL  A+    P     ++GWG + D
Sbjct:   50 VVGGEDSTDSEWPWIVSI---QKNG-THHCAGSLLTSRWVITAAHCFKDNLNKPYLFSVLLGAWQL-GNPGSRSQKVGVAWVEPHPVYSWKEGACADIALVRLERSIQFSERVLPICLPDASIHLPPNTHCWISGWGSIQD 185          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRB2_LITVA (Chymotrypsin BII OS=Litopenaeus vannamei PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.412e-12
Identity = 58/174 (33.33%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  402 KKIVDSTIPP-LTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            K +VD  I    T  I+GG  AT   +PH AAL  +      + CGG+LIS+ +VLTAAHC+D    +E   V LG   I  N   ++  I       H  +      NDIAL++L S +  + N+    L ++       +T TGWGR  D+    S+VL + +V  +   +C
Sbjct:   31 KPLVDPRIHVNATPRIVGGVEATPHSWPHQAALFIDD----MYFCGGSLISSEWVLTAAHCMDGAGFVE---VVLGAHNIRQNE-ASQVSITSTDFFTHENWNSWLLTNDIALIKLPSPVSLNSNIKTVKLPSSDVAVGTTVTPTGWGRPLDSAGGISDVLRQVDVPIMTNDDC 196          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRB1_MOUSE (Chymotrypsinogen B OS=Mus musculus GN=Ctrb1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.412e-12
Identity = 54/162 (33.33%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPT-IVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADD-PRVEL-TVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+ G+ A  G +P   +L  +   G+ F CGG+LIS  +V+TAAHC      ++ T +V  G  + G +  N +  +++AQ  K+PK+      NDI LL+L++  Q+S  +S  CL T  DD P   L   TGWG+         + L +A +  V   +C
Sbjct:   34 IVNGEDAIPGSWPWQVSL--QDRTGFHF-CGGSLISENWVVTAAHC-----GVKTTDVVVAGEFDQGSDEENVQV-LKIAQVFKNPKFNSFTVRNDITLLKLATPAQFSETVSAVCLPTVDDDFPAGTLCATTGWGKTKYNALKTPDKLQQAALPIVSEAKC 186          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: FA11_BOVIN (Coagulation factor XI OS=Bos taurus GN=F11 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 52/162 (32.10%), Postives = 77/162 (47.53%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDI-RVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADD--PRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+GG  +  GE+P    L           CGGA+I   ++LTAAHC + ++   P ++R+    +  +    +T    V + I H +Y + E   DIALL+L + + Y+ +  P CL +  D      E  VTGWG     RD   N L KA V  +   EC
Sbjct:  388 IVGGTQSVHGEWPWQITLHVTSPTQRHL-CGGAIIGNQWILTAAHCFNEVK--SPNVLRVYSGILNQSEIKEDTSFFGVQEIIIHDQYEKAESGYDIALLKLETAMNYTDSQWPICLPSKGDRNVMYTECWVTGWG-YRKLRDKIQNTLQKAKVPLMTNEEC 545          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: FA10_CHICK (Coagulation factor X OS=Gallus gallus GN=F10 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 56/167 (33.53%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  360 TTATRSQRIADRECKKIVDSTIPPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELT-----VTGWGR 845
            TT T S     R    I D   P +   I+GGD    GE P  A L  E+   +   CGG +++  ++LTAAHCI+  + I+   V +G V+      ++ET     +   H KY  +   NDIAL++L   IQ+S  + PACL  A     V +      V+G+GR
Sbjct:  216 TTTTESPTPPPRNGSSITD---PNVDTRIVGGDECRPGECPWQAVLINEKGEEF---CGGTILNEDFILTAAHCINQSKEIK---VVVGEVDREKEE-HSETTHTAEKIFVHSKYIAETYDNDIALIKLKEPIQFSEYVVPACLPQADFANEVLMNQKSGMVSGFGR 372          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRB1_RAT (Chymotrypsinogen B OS=Rattus norvegicus GN=Ctrb1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 51/161 (31.68%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADD--PRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+ G+ A  G +P   +L  +   G+ F CGG+LIS  +V+TAAHC          +V  G  + G +  N +  +++AQ  K+PK+      NDI LL+L++  Q+S  +S  CL    DD  P      TGWG+           L +A +  V   +C
Sbjct:   34 IVNGEDAIPGSWPWQVSL--QDKTGFHF-CGGSLISEDWVVTAAHCGVKTS----DVVVAGEFDQGSDEENIQV-LKIAQVFKNPKFNMFTVRNDITLLKLATPAQFSETVSAVCLPNVDDDFPPGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADC 186          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: TMPSD_HUMAN (Transmembrane protease, serine 13 OS=Homo sapiens GN=TMPRSS13 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.409e-12
Identity = 56/186 (30.11%), Postives = 87/186 (46.77%), Query Frame = 3
Query:  375 SQRIADRECKKIVDSTIPPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHC--IDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELT--VTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            SQR    +C       +  +T  I+GG +A+  ++P   +L +    G T  CGG LI   +VLTAAHC  +   + +E   V  G      N         +A+ I +  YT +E   DIAL+RLS  +  S ++ PACL        +  T  +TG+G+  +T D  S  L +  V  +  ++C
Sbjct:  301 SQRYISLQCSHC---GLRAMTGRIVGGALASDSKWPWQVSLHF----GTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGT----SNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKC 475          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: OVCH2_BUFJA (Ovochymase-2 OS=Bufo japonicus GN=OVCH2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.409e-12
Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 3
Query:  432 LTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAF----NAETDIRVAQAIKHPKYTRQEKYN-DIALLRLSSTIQYSPNLSPACLYTAAD-DPRVELTVT-GWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            L   I+GG  A +GE P M +L  +RD  +   CGG +IS  YVLTAAHC+     +E        V IG + F     +E    +    KHP +     +N D+A+L L  +I +  ++ PACL +  D  P   L +  GWGR+ +   + S+ L K  +  +  R C
Sbjct:   46 LLSRIVGGTSAVKGESPWMVSL--KRDGKHF--CGGTIISDKYVLTAAHCV-----LEKNFEFQVSVSIGDHDFAVYERSEQRFAIKSVFKHPNFKPSRPFNYDLAILELVESITFDKDIQPACLPSPDDVFPTGTLCMALGWGRLQENGRLPSS-LQKVVLPLIEYRRC 205          
The following BLAST results are available for this feature:
BLAST of FC910050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
CEL2A_BOVIN8.280e-1332.21Chymotrypsin-like elastase family member 2A OS=Bos... [more]
TRY3_CHICK1.081e-1231.29Trypsin II-P29 OS=Gallus gallus PE=2 SV=1[more]
BSSP4_HUMAN1.081e-1234.75Brain-specific serine protease 4 OS=Homo sapiens G... [more]
CTRB2_LITVA1.412e-1233.33Chymotrypsin BII OS=Litopenaeus vannamei PE=1 SV=1[more]
CTRB1_MOUSE1.412e-1233.33Chymotrypsinogen B OS=Mus musculus GN=Ctrb1 PE=2 S... [more]
FA11_BOVIN1.845e-1232.10Coagulation factor XI OS=Bos taurus GN=F11 PE=1 SV... [more]
FA10_CHICK1.845e-1233.53Coagulation factor X OS=Gallus gallus GN=F10 PE=1 ... [more]
CTRB1_RAT1.845e-1231.68Chymotrypsinogen B OS=Rattus norvegicus GN=Ctrb1 P... [more]
TMPSD_HUMAN2.409e-1230.11Transmembrane protease, serine 13 OS=Homo sapiens ... [more]
OVCH2_BUFJA2.409e-1232.94Ovochymase-2 OS=Bufo japonicus GN=OVCH2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22CB05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910050 ID=FC910050; Name=FC910050; organism=Citrus clementina; type=EST; length=928bp
CGACAAGGAAAATCGTGAGATATGGTGCGGTGTTGTGCCTCGAAATAAGT
TTATTTTAAACGTGAATAAATATATGTTCGGTATAAACCTAGACCGGCTT
TGTTTTAATCCTAATAATGCTTTTTGAAGTTGGTGCGCTTTTGTGTCTTG
TTAATTTGGCGTCTTCGAAATATGTGGGCGATTCGTGCCGGCTGCCCGGG
AATGCTGAAAATGGAACTTGCAGCATTGTGGAAGACTGCCCCGTCGCTGT
CAGGTCCCTCAAGGAGCATAGAAAGCATTCTTTGCCTAGATGCGGGTTTC
TAGATCATTCCGAAATTGTTTGCTGTCCACTGGAAACTGTGAATAAATAT
GATACAGACACCACAGCAACCAGGTCTCAAAGAATAGCTGACCGAGAATG
CAAGAAAATTGTTGATTCCACAATACCGCCGTTGACCTTGCATATTATTG
GCGGCGACATAGCTACTCAGGGAGAATTTCCTCATATGGCAGCACTTGGC
TATGAGAGGGACAACGGGTACACATTCGACTGCGGTGGAGCTCTCATCTC
AACCACGTACGTGTTGACCGCGGCCCACTGCATCGACAATTTAGAGAGGA
TAGAACCCACTATAGTGCGTCTCGGAGTCGTGGAGATCGGCGGCAACGCC
TTCAACGCCGAGACCGACATCCGCGTGGCGCAAGCCATCAAACACCCAAA
GTACACAAGGCAGGAGAAATACAATGACATCGCACTTTTAAGGCTAAGCA
GTACTATCCAGTACAGTCCTAACCTGAGCCCGGCGTGCCTGTACACGGCC
GCGGACGACCCGCGCGTCGAGCTCACCGTCACCGGCTGGGGCCGCATGAA
CGACACCAGAGACATAAAGAGCAACGTGCTGTTGAAAGCGAACGTGACGG
CGGTGGGCCCGCGCGAGTGCGCGCCGCA
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