FC910050

Overview
NameFC910050
Unique NameFC910050
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length928
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3123 contig Ccv1_Contig3123:1..928. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTR2_CANFA (Chymotrypsinogen 2 OS=Canis familiaris GN=CTRB1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 52/161 (32.30%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADD-PRVELTV-TGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            I+ G+ A  G +P   +L  +   G+ F CGG+LIS  +V+TAAHC   +      +   G  + G +A + +  +++A+  K+PK+      NDI LL+L++  ++S  +S  CL  A DD P   L V TGWG    T     + L +A +  +   EC
Sbjct:   34 IVNGEDAVPGSWPWQVSL--QDSTGFHF-CGGSLISEDWVVTAAHC--GVRTTHQVVA--GEFDQGSDAESIQV-LKIAKVFKNPKFNMFTINNDITLLKLATPARFSKTVSAVCLPQATDDFPAGTLCVTTGWGLTKHTNANTPDKLQQAALPLLSNAEC 186          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CEL2A_RAT (Chymotrypsin-like elastase family member 2A OS=Rattus norvegicus GN=Cela2a PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVR--LGVVEIGGNAFNAETDIRVAQAIKHPKYTRQE--KYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPRECA 923
            ++GG  A+   +P   +L Y     +   CGG+L++  +VLTAAHCI N       + R  L   E G  A      ++V++ + H K+  Q+    NDIAL++L+S +  +  +  ACL  A           VTGWGR+  T     +VL +  +  V    C+
Sbjct:   31 VVGGQEASPNSWPWQVSLQYLSSGKWHHTCGGSLVANNWVLTAAHCISNSRTYRVLLGRHSLSTSESGSLA------VQVSKLVVHEKWNAQKLSNGNDIALVKLASPVALTSKIQTACLPPAGTILPNNYPCYVTGWGRL-QTNGATPDVLQQGRLLVVDYATCS 189          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: ACRO_PIG (Acrosin OS=Sus scrofa GN=ACR PE=1 SV=5)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  438 LHIIGGDIATQGEFPHMAALG---YERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVE-IGGNAFNAETDIR---VAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL-YTAADDPRVELT--VTGWGRMNDTRDIKSNVLLKANVTAVGPREC 920
            + ++GG  A  G +P M +L    Y  +  Y   CGG L+++ +VLTAAHC  N +++    +  G  E + G+    +  ++   V + I H KY    + NDIAL++++  +   P + P CL    A  PR   T  VTGWG + +     S  L +A V  +    C
Sbjct:   38 MRVVGGMSAEPGAWPWMVSLQIFMYHNNRRY-HTCGGILLNSHWVLTAAHCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQERFVEEIIIHEKYVSGLEINDIALIKITPPVPCGPFIGPGCLPQFKAGPPRAPQTCWVTGWGYLKEKGPRTSPTLQEARVALIDLELC 207          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: ACRO_MOUSE (Acrosin OS=Mus musculus GN=Acr PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12
Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALG-YERDNGYTFD-CGGALISTTYVLTAAHCIDNLERIEPTIVRLGV--VEIGGN--AFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL-YTAADDPRVELT--VTGWGRMNDTRDIKSNVLLKANVTAV 905
            I+ G  A  G +P M +L  +   N   +  CGG+L+++ +VLTAAHC DN +++    +  G   +E G N      + +  V + + H KY    + NDIALL+++  +     + P CL +  A  P++  T  VTGWG + +     S VL++A V  +
Sbjct:   43 IVSGQSAQLGAWPWMVSLQIFTSHNSRRYHACGGSLLNSHWVLTAAHCFDNKKKVYDWRLVFGAQEIEYGRNKPVKEPQQERYVQKIVIHEKYNVVTEGNDIALLKITPPVTCGNFIGPCCLPHFKAGPPQIPHTCYVTGWGYIKEKAPRPSPVLMEARVDLI 205          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: TRY1_ANOGA (Trypsin-1 OS=Anopheles gambiae GN=TRYP1 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPR--VELTVTGWGRMNDTRDIKSNVLLK-ANVTAVGPREC 920
            I+GG      + P+  +L Y + +    +CGG+++S+ +VLTAAHC         T VRLG            T +RVA+ ++HPKY       D +LL L   + +S ++ P  L    +  +     TV+GWG  N     +SN +L+ ANV  V  +EC
Sbjct:   48 IVGGFEIDVSDAPYQVSLQYNKRH----NCGGSVLSSKWVLTAAHCTAGASPSSLT-VRLGTSRHASGG----TVVRVARVVQHPKYDSSSIDFDYSLLELEDELTFSDSVQPVGLPKQDETVKDGTMTTVSGWG--NTQSAAESNAVLRAANVPTVNQKEC 198          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: FA7_RABIT (Coagulation factor VII OS=Oryctolagus cuniculus GN=F7 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 47/140 (33.57%), Postives = 74/140 (52.86%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL----YTAADDPRVELT-VTGWGRM 848
            I+GG +  +GE P  AAL     NG T  CGG+L+ T +V++AAHC D L  +    + LG  ++  +  + +    VAQ I   KY   +  +DIALLRL      + N+ P CL    ++ +    +  + V+GWG++
Sbjct:  192 IVGGKVCPKGECPWQAALM----NGSTLLCGGSLLDTHWVVSAAHCFDKLSSLRNLTIVLGEHDLSEHEGDEQVR-HVAQLIMPDKYVPGKTDHDIALLRLLQPAALTNNVVPLCLPERNFSESTLATIRFSRVSGWGQL 326          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: TRY2_HUMAN (Trypsin-2 OS=Homo sapiens GN=PRSS2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRVELTVTGWG 842
            I+GG I  +   P+  +L    ++GY F CGG+LIS  +V++A HC  +  RI+  +    +  + GN    E  I  A+ I+HPKY  +   NDI L++LSS    +  +S   L TA      E  ++GWG
Sbjct:   24 IVGGYICEENSVPYQVSL----NSGYHF-CGGSLISEQWVVSAGHCYKS--RIQVRLGEHNIEVLEGN----EQFINAAKIIRHPKYNSRTLDNDILLIKLSSPAVINSRVSAISLPTAPPAAGTESLISGWG 145          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: PRS27_MOUSE (Serine protease 27 OS=Mus musculus GN=Prss27 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 53/172 (30.81%), Postives = 84/172 (48.84%), Query Frame = 3
Query:  426 PPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAADDPRV------ELTVTGWGRMNDTRDIKS-NVLLKANVTAVGPREC 920
            P +   ++GG+ A +GE+P   ++   + NG  F CGG+LI+ T+VLTAAHC  N   I    V LG +++     +A   + V Q   +P+Y       D+AL+ L   + ++  + P CL     DP V         VTGWG  ++   + +  VL K  V  +   +C
Sbjct:   32 PKMFNRMVGGENALEGEWPWQVSI---QRNGIHF-CGGSLIAPTWVLTAAHCFSNTSDISIYQVLLGALKLQQPGPHA-LYVPVKQVKSNPQYQGMASSADVALVELQGPVTFTNYILPVCL----PDPSVIFESGMNCWVTGWGSPSEQDRLPNPRVLQKLAVPIIDTPKC 194          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CTRC_HUMAN (Chymotrypsin-C OS=Homo sapiens GN=CTRC PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 49/153 (32.03%), Postives = 75/153 (49.02%), Query Frame = 3
Query:  411 VDSTIPPLTLHIIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVR--LGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACL-----YTAADDPRVELTVTGWGRM 848
            V S  P L+  ++GG+ A    +P   +L Y +++ +   CGG LI++ +VLTAAHCI N       + +  L V +  G+ F     I V     H ++      NDIAL++L+  ++ S  +  ACL         D P     VTGWGR+
Sbjct:   19 VPSFPPNLSARVVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISNTRTYRVAVGKNNLEVEDEEGSLFVGVDTIHV-----HKRWNALLLRNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYP---CYVTGWGRL 163          
BLAST of FC910050 vs. ExPASy Swiss-Prot
Match: CATG_MOUSE (Cathepsin G OS=Mus musculus GN=Ctsg PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 56/162 (34.57%), Postives = 79/162 (48.77%), Query Frame = 3
Query:  444 IIGGDIATQGEFPHMAALGYERDNGYTFDCGGALISTTYVLTAAHCIDNLERIEPTIVRLGVVEIGGNAFNAETDIRVAQAIKHPKYTRQEKYNDIALLRLSSTIQYSPNLSPACLYTAAD--DPRVELTVTGWGRMNDTRDIKSNVLLKANVTAVGPRECA 923
            IIGG  A    +P+MA L  +   G +  CGG L+   +VLTAAHC+ +        V LG   I       +  I V +AI+HP Y  Q   NDI LL+L    + S ++ P  L  A+    P    TV GWGR++ +R   +NVL +  +     + CA
Sbjct:   21 IIGGREARPHSYPYMAFLLIQSPEGLSA-CGGFLVREDFVLTAAHCLGSSIN-----VTLGAHNIQMRERTQQL-ITVLRAIRHPDYNPQNIRNDIMLLQLRRRARRSGSVKPVALPQASKKLQPGDLCTVAGWGRVSQSRG--TNVLQEVQLRVQMDQMCA 173          
The following BLAST results are available for this feature:
BLAST of FC910050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
CTR2_CANFA5.367e-1232.30Chymotrypsinogen 2 OS=Canis familiaris GN=CTRB1 PE... [more]
CEL2A_RAT5.367e-1230.12Chymotrypsin-like elastase family member 2A OS=Rat... [more]
ACRO_PIG5.367e-1230.41Acrosin OS=Sus scrofa GN=ACR PE=1 SV=5[more]
ACRO_MOUSE5.367e-1231.29Acrosin OS=Mus musculus GN=Acr PE=2 SV=1[more]
TRY1_ANOGA7.009e-1232.10Trypsin-1 OS=Anopheles gambiae GN=TRYP1 PE=2 SV=3[more]
FA7_RABIT7.009e-1233.57Coagulation factor VII OS=Oryctolagus cuniculus GN... [more]
TRY2_HUMAN9.154e-1234.59Trypsin-2 OS=Homo sapiens GN=PRSS2 PE=1 SV=1[more]
PRS27_MOUSE9.154e-1230.81Serine protease 27 OS=Mus musculus GN=Prss27 PE=2 ... [more]
CTRC_HUMAN9.154e-1232.03Chymotrypsin-C OS=Homo sapiens GN=CTRC PE=1 SV=2[more]
CATG_MOUSE9.154e-1234.57Cathepsin G OS=Mus musculus GN=Ctsg PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22CB05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC910050 ID=FC910050; Name=FC910050; organism=Citrus clementina; type=EST; length=928bp
CGACAAGGAAAATCGTGAGATATGGTGCGGTGTTGTGCCTCGAAATAAGT
TTATTTTAAACGTGAATAAATATATGTTCGGTATAAACCTAGACCGGCTT
TGTTTTAATCCTAATAATGCTTTTTGAAGTTGGTGCGCTTTTGTGTCTTG
TTAATTTGGCGTCTTCGAAATATGTGGGCGATTCGTGCCGGCTGCCCGGG
AATGCTGAAAATGGAACTTGCAGCATTGTGGAAGACTGCCCCGTCGCTGT
CAGGTCCCTCAAGGAGCATAGAAAGCATTCTTTGCCTAGATGCGGGTTTC
TAGATCATTCCGAAATTGTTTGCTGTCCACTGGAAACTGTGAATAAATAT
GATACAGACACCACAGCAACCAGGTCTCAAAGAATAGCTGACCGAGAATG
CAAGAAAATTGTTGATTCCACAATACCGCCGTTGACCTTGCATATTATTG
GCGGCGACATAGCTACTCAGGGAGAATTTCCTCATATGGCAGCACTTGGC
TATGAGAGGGACAACGGGTACACATTCGACTGCGGTGGAGCTCTCATCTC
AACCACGTACGTGTTGACCGCGGCCCACTGCATCGACAATTTAGAGAGGA
TAGAACCCACTATAGTGCGTCTCGGAGTCGTGGAGATCGGCGGCAACGCC
TTCAACGCCGAGACCGACATCCGCGTGGCGCAAGCCATCAAACACCCAAA
GTACACAAGGCAGGAGAAATACAATGACATCGCACTTTTAAGGCTAAGCA
GTACTATCCAGTACAGTCCTAACCTGAGCCCGGCGTGCCTGTACACGGCC
GCGGACGACCCGCGCGTCGAGCTCACCGTCACCGGCTGGGGCCGCATGAA
CGACACCAGAGACATAAAGAGCAACGTGCTGTTGAAAGCGAACGTGACGG
CGGTGGGCCCGCGCGAGTGCGCGCCGCA
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