FC912495

Overview
NameFC912495
Unique NameFC912495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length869
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABD_RAT (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus GN=Ppp2r2d PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.395e-29
Identity = 71/134 (52.99%), Postives = 85/134 (63.43%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG         +W FSQV G     E+V E DIIS +EF+ SGD LATGD+GGRVV+F+R   ++N G+               E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGGCPTGGNDFQWCFSQVKG--AVDEDVAEADIISTVEFNYSGDLLATGDKGGRVVIFQRE--QENKGRAHS----------RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKT 124          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_YEAST (Protein phosphatase PP2A regulatory subunit B OS=Saccharomyces cerevisiae GN=CDC55 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28
Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = 2
Query:  488 AAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            A    ++KFSQ FG++ A   V E D+I+A+EFD +G++LATGD+GGRVVLFER++                  SRH E+++ TEFQSH+ EFDYLKSLEIEEKIN+I+W +    + +LLSTNDKT
Sbjct:    2 AQNNFDFKFSQCFGDK-ADIVVTEADLITAVEFDYTGNYLATGDKGGRVVLFERSN------------------SRHCEYKFLTEFQSHDAEFDYLKSLEIEEKINEIKWLRPTQRSHFLLSTNDKT 109          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABD_CHICK (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Gallus gallus GN=PPP2R2D PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.414e-27
Identity = 70/134 (52.24%), Postives = 83/134 (61.94%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG +       +W FSQV G     E+V E DIIS +EF+ SGD LATGD+GGRVV+F+R     +    R             E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    6 GGGGN---GNDFQWCFSQVQG--AVDEDVAEADIISTVEFNYSGDLLATGDKGGRVVIFQREQENKSRPHSRG------------EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKT 122          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_RAT (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus GN=Ppp2r2a PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG+       ++W FSQV G     ++V E DIIS +EF+ SG+ LATGD+GGRVV+F+         Q ++ ++  +S     E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGND------IQWCFSQVKG--AVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ---------QEQENKIQSHSRG---EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_RABIT (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Oryctolagus cuniculus GN=PPP2R2A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG+       ++W FSQV G     ++V E DIIS +EF+ SG+ LATGD+GGRVV+F+         Q ++ ++  +S     E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGND------IQWCFSQVKG--AVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ---------QEQENKIQSHSRG---EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_MOUSE (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Mus musculus GN=Ppp2r2a PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG+       ++W FSQV G     ++V E DIIS +EF+ SG+ LATGD+GGRVV+F+         Q ++ ++  +S     E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGND------IQWCFSQVKG--AVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ---------QEQENKIQSHSRG---EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_MACFA (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Macaca fascicularis GN=PPP2R2A PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG+       ++W FSQV G     ++V E DIIS +EF+ SG+ LATGD+GGRVV+F+         Q ++ ++  +S     E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGND------IQWCFSQVKG--AVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ---------QEQENKIQSHSRG---EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_HUMAN (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Homo sapiens GN=PPP2R2A PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 2
Query:  467 GGGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            GGG+       ++W FSQV G     ++V E DIIS +EF+ SG+ LATGD+GGRVV+F+         Q ++ ++  +S     E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:    5 GGGND------IQWCFSQVKG--AVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ---------QEQENKIQSHSRG---EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKT 118          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABA_DROME (Protein phosphatase PP2A 55 kDa regulatory subunit OS=Drosophila melanogaster GN=tws PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.482e-26
Identity = 65/133 (48.87%), Postives = 79/133 (59.40%), Query Frame = 2
Query:  470 GGSSEAAAQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            G    A+     W FSQ+ G     ++V + DIIS +EF+  G+ LATGD+GGRVV+F+R         RR             E+   + FQSHEPEFDYLKSLEIEEKINKIRW Q  N   +LLSTNDKT
Sbjct:   53 GAKKPASNGEASWCFSQIKG--ALDDDVTDADIISCVEFNHDGELLATGDKGGRVVIFQRDPASKAANPRRG------------EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLQQKNPVHFLLSTNDKT 171          
BLAST of FC912495 vs. ExPASy Swiss-Prot
Match: 2ABB_PIG (Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Sus scrofa GN=PPP2R2B PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.567e-25
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 2
Query:  557 EVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDNGGQRRDLEMMDYSMSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQSANSALYLLSTNDKT 868
            E DIISA+EF+ +G+ LATGD+GGRVV+F+R     N   RR             E+   + FQSHEPEFDYLKSLEIEEKINKIRW    N+A +LLSTNDKT
Sbjct:   23 EADIISAVEFNHTGELLATGDKGGRVVIFQREQESKNQVHRRG------------EYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKT 114          
The following BLAST results are available for this feature:
BLAST of FC912495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
2ABD_RAT4.395e-2952.99Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_YEAST4.859e-2851.97Protein phosphatase PP2A regulatory subunit B OS=S... [more]
2ABD_CHICK1.414e-2752.24Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_RAT7.016e-2750.75Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_RABIT7.016e-2750.75Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_MOUSE7.016e-2750.75Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_MACFA7.016e-2750.75Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_HUMAN7.016e-2750.75Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]
2ABA_DROME3.482e-2648.87Protein phosphatase PP2A 55 kDa regulatory subunit... [more]
2ABB_PIG6.567e-2557.69Serine/threonine-protein phosphatase 2A 55 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA45DA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA45DA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC912495 ID=FC912495; Name=FC912495; organism=Citrus clementina; type=EST; length=869bp
CAATAGCATTTCCTGCTCCGTCATTATCTTCCAATCTCCATTTTTTCTAC
TCTCTGAAATAAAAAAGAAAAAAAGGCGAAACAAAAAGAAATTACTAGTA
CAGTGTGAAAATCTCAATCGACGTTCAATCTGTGCTCTATCTATATAGCA
AGCGTACGATGTCGATGTGAAAAAATTTCATCGATTTCCATTTTCTAGAG
AGAGAAAGCGGAATCTAAATTTAGAGAGAGAAAAAGAGTGAGTGAGTGTT
TCCTGTTGTTGAAATCTGGCTCTCTGGAGTGCTTGTATTTACGGTTCGTC
ATGGTTCGATTAATCGACGAGCTCGCCTTATCGTTTGTTTTAAATCGGTG
ATGAGATTGTACAAGTTTCAGATCGATTCCGTTTGGATGCATTAAAATTG
AGTTGGTGTTTTTATTTTTCATTTTTCTTCTTCTGGATTTCTCTTATTGT
GAAAGAAATGGACAACGGCGGCGGCTCCTCCGAAGCCGCGGCTCAGCCGC
TCGAGTGGAAATTCTCGCAAGTGTTCGGAGAACGGACTGCTGGAGAGGAA
GTGCAGGAAGTTGATATCATATCCGCTATTGAATTTGATAAATCTGGTGA
TCACCTTGCTACTGGAGATCGTGGGGGCCGAGTGGTTTTATTTGAGAGAA
CTGACACACGAGATAATGGTGGACAACGGAGAGATCTAGAGATGATGGAT
TATTCAATGAGCAGGCACCCTGAGTTCCGGTATAAAACAGAGTTTCAAAG
CCATGAGCCTGAGTTTGATTATCTAAAGAGCTTGGAGATTGAAGAGAAGA
TCAACAAGATTAGATGGTGCCAGTCAGCTAATAGTGCCCTGTATCTCCTG
TCCACTAACGACAAGACTA
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