FC916143

Overview
NameFC916143
Unique NameFC916143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length934
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.679e-27
Identity = 81/243 (33.33%), Postives = 118/243 (48.56%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRR-KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGGS 917
            ++ K  K Y   EE  +R  +++ N +             H  T     F DLT  EF +   G +R K++          L    +P   DWR+ G V PVK+QG C S W+FS TG+LEG  F  T +L+ LSEQ L+DC          +   GC+GG M  AF+Y    GGL  EE YPY G  +G  C++     AA+V +F  +   E+ +   + + GP++VA++A +      GS
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLY---VPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDC-------MGSNVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRG--QGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGS 261          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.570e-27
Identity = 82/238 (34.45%), Postives = 119/238 (50.00%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDP----SATHGVTQFSDLTPAEFRRTYLGLRRKLR------LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV-ENGPLAVAIN 884
            +K+ +NK Y   ++  RR  I++ N++              + T G+ QF+D+T  EF+  YL    +        +P +A+   +      P   DWRE G V  VKDQG+CGSCW+FSTTG +EG         +S SEQQLVDC            ++GC+GGLM +A++Y LK  GL  E  YPYT  +    C+++K    A V  +  V    +    NLV    P AVA++
Sbjct:   24 WKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAV------PDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQY-LKQFGLETESSYPYTAVE--GQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVD 244          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINA 887
            +K K+ KAY+ +EE  +R  +++ N+++       +    HG T     F D+T  EFR+  + +   +   K         + +LP   +W+++G V PV+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC            + GC  G    A  Y ++ GGL  E  YPY   ++  +C++      A++  F  V  +ED +   +   GP++VAI+A
Sbjct:   32 WKIKYGKAYSLEEEGQKR-AVWEDNMKKIKLHNGENGLGKHGFTMEMNAFGDMTLEEFRKVMIEI--PVPTVKKGKSVQKRLSVNLPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRP-------QGNWGCYLGNTYLALHYVMENGGLESEATYPY--EEKDGSCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDA 251          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 78/245 (31.84%), Postives = 123/245 (50.20%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVY--MQTYIGGSF 920
            +K K+ K+Y+  EE  +R  +++ NL+      K +    +G T     F+D T  EFR++   +     +   + Q  +  +  LP   DWR++G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y LK  GL  E  YPY G D    C++     +A++  F  +  +E  +   +   GP++ AI+A +   + Y GG +
Sbjct:   32 WKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQV--SIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD--GPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYSGGVY 264          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 79/245 (32.24%), Postives = 123/245 (50.20%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT----QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVY--MQTYIGGSF 920
            +K K+ K+Y+ +EE  RR  +++ N+R      K +    +  T    +F D T  EFR++   +     +     Q  +  +  LP   DWRE+G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY LK  GL  E  YPY G D    C++     +A++ ++  +  +E  +   +   GP++ AI+A +   + Y GG +
Sbjct:   32 WKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQNHV--SIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD--GPCRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIY 264          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.968e-27
Identity = 74/237 (31.22%), Postives = 116/237 (48.95%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAAR-RQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL-----PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINA 887
            F  +  ++ + Y   +E   RF IFK N+        +   S T G+ QF+D+T  EF   Y GL     LP +  + P++  +D+     P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY        CK +    +A +  ++ V  + ++     V N P+A A++A
Sbjct:   37 FEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLS----LPLNIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK--GTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDA 257          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.794e-27
Identity = 80/240 (33.33%), Postives = 121/240 (50.42%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVEN-GPLAVAINA 887
            + L+KK   K Y S+ +   R  I++ NL++ +          H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D   +C ++ +  AA    +  + +  ++     V   GP++V+I+A
Sbjct:   26 WELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLRIP---PSRSYSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD--ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDA 251          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.018e-26
Identity = 80/240 (33.33%), Postives = 121/240 (50.42%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVEN-GPLAVAINA 887
            + L+KK   K Y S+ +   R  I++ NL++ +          H     +    D+T  E  +   GLR     P  +     L T +    +P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  + GG+  E+ YPY G D   +C ++ +  AA    +  + +  ++     V   GP++V+I+A
Sbjct:   26 WELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDMTSEEVVQKMTGLRVP---PSRSFSNDTLYTPEWEGRVPDSIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD--ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDA 251          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26
Identity = 80/251 (31.87%), Postives = 122/251 (48.61%), Query Frame = 3
Query:  204 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT----QFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVY--MQTYIGGSF 920
            +K K+NK+Y+ +EE  +R  +++  L+      + +    +G T    +F D T  EFR+  + +        K  + ++A          LP   DWR+KG V PV+ QG C +CW+F+ TGA+E      TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D    C+++     A +  F  +   ED + A +   GP+   I+A +   + Y GG +
Sbjct:   32 WKIKYNKSYSLKEEKLKR-VVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSI-------LPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD--GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIY 265          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.330e-26
Identity = 86/254 (33.86%), Postives = 125/254 (49.21%), Query Frame = 3
Query:  168 NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLR--RAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGG 914
            +D +   + ++ +K K+N+ Y +Q +   R+ +F  NL   RA      + + T  + QF+D++  EF +TYL L+    +P+ A   A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   +   LSEQ LVDC    D       + GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F    +D     A  ++   +AVA++A   Q Y  G
Sbjct:   17 SDEIDTANLYANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLK----VPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFK--DIDSCDELAQTIQERTVAVAVDANPWQFYRSG 254          
The following BLAST results are available for this feature:
BLAST of FC916143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
TEST2_RAT2.679e-2733.33Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATLL_FASHE4.570e-2734.45Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATM_MOUSE5.968e-2731.90Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATJ_RAT5.968e-2731.84Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATJ_MOUSE5.968e-2732.24Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
ANAN_ANACO5.968e-2731.22Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATK_MOUSE7.794e-2733.33Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATK_RAT1.018e-2633.33Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATR_MOUSE1.330e-2631.87Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL1_PARTE1.330e-2633.86Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87AF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC916143 ID=FC916143; Name=FC916143; organism=Citrus clementina; type=EST; length=934bp
CAGCATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTC
TCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGT
TGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCC
ACCACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCC
CTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGA
CCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCC
AGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTG
ACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAG
GCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGC
CGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGAT
CAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGA
AGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAAC
AGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGT
GATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACT
CAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTG
ATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTG
GCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCT
TGTGGAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGA
CATACATTGGGGGGAGTTTCCTGCCCATACATAT
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