FC916143

Overview
NameFC916143
Unique NameFC916143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length934
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.991e-14
Identity = 50/159 (31.45%), Postives = 73/159 (45.91%), Query Frame = 3
Query:  447 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINA-VYMQTYIGGSF 920
            +P   DWR+ GAV  VK+Q  CG+CW+F+    +E    +  G L  LSEQQ++DC          +   GC GG    AFE+ +   G+     YPY        CK D    +A +  ++ V  + +      V   P+ VA++A    Q Y  G F
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK--GTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVF 148          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14
Identity = 54/192 (28.12%), Postives = 88/192 (45.83%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRR-----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 755
            F  +KK FNK+YA+ E+ +     F  ++       K   S    +   SDL+  EF+  +L         K +   +A+        + PA+ D R+   V P++ QG CGSCW+FS   A E A      + + L+EQ+LVDC          +   GC+G  +    EY ++  G+++E  Y Y   ++
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESV-------KYVQSNGGAINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDC----------ASQHGCHGDTIPRGIEY-IQHNGVVQESYYRYVAREQ 199          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.905e-13
Identity = 70/250 (28.00%), Postives = 107/250 (42.80%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARR-QKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP-------ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGGSF 920
            F  +  K NK Y   E+   R  I+ +N R      Q+ D +   G  QF  L+  EF   YL         + +D +  +    LP          DWR    V   K+QG C S W+FS + +LE    +   + ++ S QQ+VDCD+          ++GC+GG    A EY L+  GL+   +YPY    +   CK  ++     +  +S V   +  +   L  N P++V + A   Q Y  G F
Sbjct:   29 FERWALKNNKFYTESEKL-YRMEIYNSNKRMIEEHNQREDVTYQMGENQFMTLSHEEFVDLYL---------QKSDSSVNIMGASLPEVQLEGLGAVDWRNYTTV---KEQGQCASGWAFSVSNSLEAWYAIRGFQKINASTQQIVDCDYN---------NTGCSGGYNAYAMEYVLRV-GLVSSTNYPYVA--KNQTCKQSRNG-TYFINGYSFVGGSQSNLQYYL-NNYPISVGVEASNWQFYRSGLF 251          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.093e-12
Identity = 66/225 (29.33%), Postives = 99/225 (44.00%), Query Frame = 3
Query:  234 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVENGPLAVA 878
            SQE++  R   +  N  +A    +   +AT  + ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GP+AVA
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYM-EYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVA 373          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 66/225 (29.33%), Postives = 98/225 (43.56%), Query Frame = 3
Query:  234 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVENGPLAVA 878
            SQE++  R   +  N  +A    +   +AT    ++  LT  +  R   G  RK+  PK A     +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GP+AVA
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATT-YKEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQKVLHLPTSWDWRNIHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTSNSQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVA 373          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.427e-12
Identity = 70/251 (27.89%), Postives = 105/251 (41.83%), Query Frame = 3
Query:  234 SQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGA---VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVENGPLAVAI----------NAVYMQTYIGGSFLP 926
            SQE++  R   +  N  +A    +   +AT  + ++  LT  +  +   G  RK+  PK       +      LP  +DWR       V PV++Q SCGSC+SF++ G LE    + T    +  LS Q++V C              GC GG          +  GL+ E  +PYTGTD     K D  +  +S  ++        +E  +   LV +GPLAVA           N +Y  T +   F P
Sbjct:  159 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYM-EYETLTLGDMIKRSGGHSRKIPRPKPTPLTAEIQQKILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASVGMLEARIRILTNNSQTPILSSQEVVSCSQYA---------QGCEGGFPYLTAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHHTGLRDPFNP 399          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.208e-11
Identity = 59/196 (30.10%), Postives = 86/196 (43.88%), Query Frame = 3
Query:  336 QFSDLTPAEFRRTYLGLRRKLRLPKDAD-----QAPILPTNDLPADFDWREKGAVG---PVKDQGSCGSCWSFSTTGALEGANFLATGKLVS--LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV-----SLDEDQIAANLVENGPLAVA 878
            ++  LT  E  R   G  R++  PK A      Q  IL    LP  +DWR    +    PV++QGSCGSC+SF++ G +E    + T    +  LS Q++V C              GC GG          +  GL+ E+ +PYTGTD    C+  +       + +  V       +E  +   LV  GP+AVA
Sbjct:  192 EYETLTLKEMIRRGGGHSRRIPRPKPAPITAEIQKKIL---HLPTSWDWRNVHGINFVTPVRNQGSCGSCYSFASMGMMEARIRILTNNTQTPILSPQEVVSCSQYA---------QGCEGGFPYLIAGKYAQDFGLVEEDCFPYTGTD--SPCRLKEGCFRYYSSEYHYVGGFYGGCNEALMKLELVHQGPMAVA 373          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: GMSA_DICDI (Gamete and mating-type specific protein A OS=Dictyostelium discoideum GN=gmsA PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11
Identity = 48/163 (29.45%), Postives = 69/163 (42.33%), Query Frame = 3
Query:  405 PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG----KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAI 881
            PK    AP  P        DW       P++DQG CGSCW+F+++ ALE    +  G      + LS Q  V+C             SGCNGG   + F +  K  G+  E+D PY     G +C    S       N+      +  + A L + GP+ +A+
Sbjct:  226 PKPTTPAPTTPAPTSTLTVDWTSYQT--PIRDQGQCGSCWAFASSAALESRYLIKYGTAQKSTLQLSNQNAVNC-----------IASGCNGGWSGNYFNF-FKTPGIAYEKDDPYKAV-TGTSCITTSSVARFKYTNYGYTEKTKAALLAEL-KKGPVTIAV 372          
The following BLAST results are available for this feature:
BLAST of FC916143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
BROM2_ANACO1.991e-1431.45Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
PEPT1_DERPT2.601e-1428.13Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
CATL3_PARTE4.905e-1328.00Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATC_HUMAN1.093e-1229.33Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_PONAB1.427e-1229.33Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_MACFA1.427e-1227.89Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_BOVIN1.208e-1130.10Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
GMSA_DICDI1.578e-1129.45Gamete and mating-type specific protein A OS=Dicty... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87AF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC916143 ID=FC916143; Name=FC916143; organism=Citrus clementina; type=EST; length=934bp
CAGCATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTC
TCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGT
TGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCC
ACCACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCC
CTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGA
CCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCC
AGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTG
ACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAG
GCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGC
CGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGAT
CAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGA
AGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAAC
AGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGT
GATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACT
CAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTG
ATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTG
GCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCT
TGTGGAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGA
CATACATTGGGGGGAGTTTCCTGCCCATACATAT
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