FC916143

Overview
NameFC916143
Unique NameFC916143
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length934
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.016e-34
Identity = 84/218 (38.53%), Postives = 125/218 (57.34%), Query Frame = 3
Query:  192 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDED 833
            HF+ + K+  K Y+S+E +  R  +F  N R+     + + +   G+ QFSD++ AE +  YL        P++        +  T   P+  DWR+KG  V PVK+QG+CGSCW+FSTTGALE A  +A+GK+++L+EQQLVDC    +       + GC GGL + AFEY L   G+M E+ YPY G  +   CKF+  K  A V N   ++L+++
Sbjct:   32 HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIG--KNGQCKFNPEKAVAFVKNVVNITLNDE 234          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.326e-34
Identity = 91/254 (35.83%), Postives = 139/254 (54.72%), Query Frame = 3
Query:  171 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDAD---QAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGG 914
            DLL A ++F  F  KFNK Y+S+ E   RF IF+ NL     + + D +A + + +FSDL+  E    Y GL     LP       +  IL  P +  P +FDWR+   V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GG+  E DYPY  T  G  C+ + ++    V +    + + E+++   L   GP+ VAI+A  +  Y  G
Sbjct:   20 DLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDLSKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQ-CRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRG 258          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.732e-34
Identity = 98/235 (41.70%), Postives = 124/235 (52.77%), Query Frame = 3
Query:  195 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVENGPLAVAINAV 890
            F+ F  +  K Y S EE  +RF IF  NL+      +   S   G+ +F+DLT  EFR+  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF ++ I   V    N ++ +  E + A  LV   P++VA   V
Sbjct:   57 FARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTG--KNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVV 278          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.732e-34
Identity = 86/250 (34.40%), Postives = 137/250 (54.80%), Query Frame = 3
Query:  171 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVENGPLAVAINAVYMQTYIGG 914
            D+L A ++F  F +++NK Y S+ E  RR+ IF+ NL     + + D +A + + +FSDL+  E    Y GL   L      +   +  P    P +FDWR    +  VK+QG CG+CW+F+T  +LE    +A  +L++LSEQQ++DCD         S D GC GGL+++AFE  +  GG+  E DYPY  ++  + C+ D +K    V   +  +++ E+++   L   GP+ VAI+A  +  Y  G
Sbjct:   20 DILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSN--NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQG 257          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATL_DROME (Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.732e-34
Identity = 97/251 (38.65%), Postives = 137/251 (54.58%), Query Frame = 3
Query:  171 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKL----DPSATHGVTQFSDLTPAEFRRTYLG----LRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVENGPLAVAINA 887
            D++  E H   FK +  K Y  + E   R  IF  N  + A+  +       S    V +++DL   EFR+   G    L ++LR   ++ +    I P +  LP   DWR KGAV  VKDQG CGSCW+FS+TGALEG +F  +G LVSLSEQ LVDC  +         ++GCNGGLM++AF Y    GG+  E+ YPY   D   +C F+K  + A+   F+ +   DE ++A  +   GP++VAI+A
Sbjct:   53 DVVMEEWH--TFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQLRAADESFKGVTFISPAHVTLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAID--DSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDA 292          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.583e-34
Identity = 89/236 (37.71%), Postives = 121/236 (51.27%), Query Frame = 3
Query:  192 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHG----VTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINA 887
            H+  +K    + Y   EE  RR  +++ N +      +      HG    +  F D+T  EFR+   G + +          P+L   D+P   DW +KG V PVK+QG CGSCW+FS TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    G L  EE YPY  TD  ++C +     AA+   F  +   E  +   +   GP++VAI+A
Sbjct:   28 HWHQWKATHRRLYGMNEEEWRR-AVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDT-NSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDA 252          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.598e-34
Identity = 78/249 (31.33%), Postives = 132/249 (53.01%), Query Frame = 3
Query:  171 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGG 914
            DLL A  +F  F   +NK Y    E +RRF+IF+  L     + +L+ SA + + +F+DL+  E    Y GL   ++         I  P    P +FDWR++  V  +K+Q +CG+CW+F+T  ++E    +     + LSEQQ++DCD+          D GC+GGL+++AFE  ++ G L++E +YPY G ++    + D++ +      +  V   E+++   L   GP+ +AI+A  +  Y  G
Sbjct:   23 DLLKAGDYFETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISKYTGLNMPVQTTNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVNYHHG 262          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.123e-33
Identity = 89/249 (35.74%), Postives = 129/249 (51.81%), Query Frame = 3
Query:  186 EHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVENGPLAVAINAVYMQTYI 908
            +HH++L+KK ++K Y  + E   R  I++ NL+             H    G+    D+T  E     + L   LR+P    +     +N    LP   DWREKG V  VK QGSCG+CW+FS  GALE    L TGKLVSLS Q LVD    C  E+ G  + GCNGG M +AF+Y +   G+  E  YPY   +    C++D  K AA+ + ++ +    ED +   +   GP++VAI+A +   ++
Sbjct:   25 DHHWNLWKKTYSKQYKEENEEVARRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTGEEV----ISLMGSLRVPSQWQRNVTYRSNSNQKLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN--GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFL 261          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.467e-33
Identity = 102/266 (38.35%), Postives = 131/266 (49.25%), Query Frame = 3
Query:  111 IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVENGPLAVAINAV 890
            IR VTD     L   EST    LG       F+ F  +  K Y    E  RRF IF  +L       +       G+ +F+D++  EF+ + LG  +       A    +     LP   DWRE G V PVKDQG CGSCW+FSTTG+LE A   ATGK VSLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG +    C +    +   V    N ++ + DE + A  LV   P++VA   +
Sbjct:   34 IRSVTDHAASAL---ESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATL-AGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYN-------NFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN--GICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR--PVSVAFQVI 284          
BLAST of FC916143 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.467e-33
Identity = 88/274 (32.12%), Postives = 142/274 (51.82%), Query Frame = 3
Query:  108 LIRQVTDGGDEILSHHESTN-NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP---TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVENGPLAVAINAVYMQTYIGG 914
            L+  V    D++++     N  ++  A  +F  F  ++NK Y+S++E   R+ IF+ N+     +   + SA + + +F+D+T  E    + GL     +  +  +  ++        PA+FDWR    V  VKDQG CG+CW+F+  GALE    +   +L+ L+EQQLVDCD           D GC+GGL+++A+E  +  GG+ +E DYPY        C     K A  V N +  V L E+++   L   GP+A+A++AV +  Y GG
Sbjct:   10 LVSAVLTSHDQVVAVTIKPNLYNINSAPLYFEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLASG-DIGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRL--PCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGG 271          
The following BLAST results are available for this feature:
BLAST of FC916143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATH_RAT1.016e-3438.53Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATV_NPVOP1.326e-3435.83Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP3_SOLLC1.732e-3441.70Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATV_NPVEP1.732e-3434.40Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATL_DROME1.732e-3438.65Cathepsin L OS=Drosophila melanogaster GN=Cp1 PE=1... [more]
CATL2_BOVIN6.583e-3437.71Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATV_NPVBS8.598e-3431.33Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CATS_CANFA1.123e-3335.74Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
ORYC_ORYSJ1.467e-3338.35Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATV_NPVMC1.467e-3332.12Viral cathepsin OS=Mamestra configurata nucleopoly... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA87AF07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87AF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC916143 ID=FC916143; Name=FC916143; organism=Citrus clementina; type=EST; length=934bp
CAGCATTGTCTAAAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTC
TCTCTCGTCGTCGTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGT
TGATCAGCTGATCAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCC
ACCACGAGAGCACCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCC
CTATTCAAGAAGAAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGA
CCGTAGGTTCACTATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCC
AGAAGCTCGACCCGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTG
ACTCCGGCCGAGTTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAG
GCTGCCTAAGGATGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGC
CGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGAT
CAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGA
AGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAAC
AGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGT
GATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACT
CAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTG
ATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTG
GCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCT
TGTGGAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGA
CATACATTGGGGGGAGTTTCCTGCCCATACATAT
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