FC916153

Overview
NameFC916153
Unique NameFC916153
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length886
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 64/261 (24.52%), Postives = 114/261 (43.68%), Query Frame = 3
Query:  123 VHARALKSS-QADRSIYNNLITXXXXXXXXXXXXXXFNHIP-SPNIVSWTALISAHSNSPL---SLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSP--DNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            VHA+ LK   Q + +I N +I+              F+ +  S +++SW ++I+  S   L   +  +F+ M RH   + +    T   L   C                             +AL+  Y +F +   ++A  +F+ ++ +D++ + ++I GFAQ     D++  F+ +RSS++    Y  S           ++  + IH  A  SG   N  V + LI  Y K GI+  AR+ F +  S  +++AWNAM
Sbjct:  225 VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI---YTYTGLLSACSGEEHQIFGKSLHGMVIKKGL-EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 54/244 (22.13%), Postives = 99/244 (40.57%), Query Frame = 3
Query:  162 SIYNNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISAHS---NSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            SI  +LI               F+ +P   +  + ++I  +S   N    L ++  M+        P+  T     K C                      +D   C S L + Y +    D A+ +F ++ +RDV+C+  M+ GFAQ  + + ++  + +M++   G     + G           +  R +HG+   +GL  NV+V T L+D Y K G +  A RVF   +    +++W ++
Sbjct:   51 SISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAE---KIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVL-NLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF-SRMMFKTAVSWGSL 289          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 61/222 (27.48%), Postives = 100/222 (45.05%), Query Frame = 3
Query:  228 FNHIPSPNIVSWTALISAHSNSPLSLNIFLSMLRHPT-LSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGL--DRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            FN     ++V WTA+I  ++++  S+N  LS+ +    +   PN  T+AS+   C                             +ALVH Y++     +AK VF+   E+D+V + ++I GF+QN  + ++L +F  M S  V      V+           +     +H ++V  G     +V VGT L+D Y K G    AR +FD  +   N+I W+AM
Sbjct:  300 FNEHSHVDLVMWTAMIVGYTHNG-SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD-TIEEKNTITWSAM 517          

HSP 2 Score: 75.8702 bits (185), Expect = 3.478e-13
Identity = 59/246 (23.98%), Postives = 105/246 (42.68%), Query Frame = 3
Query:  156 DRSIYNNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISAHSNSPLSLNI---FLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            D SI   L++              F+ IP P+   W  ++  +  +  S+ +   +  +++H    F  +    +   K C                       +    G  L+  Y++     +A KVF++I  R+VVC+ +MI G+ +N    + L +F  MR ++V    Y              + Q +  HG  V SG++ +  + T L+D Y K G +S+ARRVF+E+ S ++ + W AM
Sbjct:   75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKH---GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH-SHVDLVMWTAM 314          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13
Identity = 64/259 (24.71%), Postives = 109/259 (42.08%), Query Frame = 3
Query:  123 VHARALKSSQADRSIY--NNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISAHSNSPL---SLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            +HA ALK    D+ IY  NNLI+              F+ +P  N V+WTA+I  +    L   +  +F   ++H       N+R    L   C                      +      S+LV+FY++     +A + FD + E+DV+ + A+I   ++    + ++ +F  M +       + V            +   R +H   V   +  +V VGT L+D Y K G +SD R+VFD  +S  N++ W ++
Sbjct:  104 IHAMALKCFD-DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR--FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN--LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD-GMSNRNTVTWTSI 356          

HSP 2 Score: 73.1738 bits (178), Expect = 2.255e-12
Identity = 58/259 (22.39%), Postives = 113/259 (43.63%), Query Frame = 3
Query:  117 RIVHARALKSSQADRSIYNNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISAHS---NSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            R VH   +K    +  + ++L+               F+ +   +++SWTA+ISA S   +   ++ +F+ ML H    FLPN+ T+ S+ K C                       D  F G++L+  Y++     + +KVFD +  R+ V + ++I   A+     +++S+F  M+   + +    V            +   + +H   + + +++NV +G+ L+  Y K G   DA  V  + L   + ++W AM
Sbjct:  204 RQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH---WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD-VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL-QQLPSRDVVSWTAM 457          

HSP 3 Score: 70.0922 bits (170), Expect = 1.909e-11
Identity = 58/222 (26.13%), Postives = 95/222 (42.79%), Query Frame = 3
Query:  228 FNHIPSPNIVSWTALISAHSNSPL---SLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            F+ + + N V+WT++I+AH+       ++++F  M R   ++   N  T+ S+ + C                       +  + GS LV  Y +     +A  V  ++  RDVV + AMI G +      ++L    +M    V    +  S           +   R IH  A  +    NV VG+ LI  Y K G VS+A RVFD ++   N ++W AM
Sbjct:  342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA---NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV-YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD-SMPEKNLVSWKAM 558          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP423_ARATH (Putative pentatricopeptide repeat-containing protein At5g47460 OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 42/137 (30.66%), Postives = 75/137 (54.74%), Query Frame = 3
Query:  477 SALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDR-NVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            ++L+ FY    S ++A KVFDE+ + DV+ + +++ G+ Q+ R  + + +F ++  SDV    +  +                 IH   V  GL++ NV+VG  LID YGK G + DA  VF +++   ++++WNA+
Sbjct:   94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVF-QHMEEKDTVSWNAI 229          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 63/257 (24.51%), Postives = 112/257 (43.58%), Query Frame = 3
Query:  132 RALKSSQADRSIY--NNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISA---HSNSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRN-VIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            R +      R+IY  N+++T              F  +P  +  +W +++S    H     +L  F  M +     F+ N+ + AS+   C                       D  + GSALV  YS+  + ++A++VFDE+ +R+VV + ++I  F QN   V++L VF  M  S V      ++           ++  + +HG  V +   RN +I+    +D Y K   + +AR +FD ++ + N IA  +M
Sbjct:   75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKE---GFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDV-YIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD-SMPIRNVIAETSM 326          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP343_ARATH (Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13
Identity = 60/267 (22.47%), Postives = 112/267 (41.95%), Query Frame = 3
Query:   99 NTSTDPRIVHARALKSSQADRSIYNN--LITXXXXXXXXXXXXXXFNHIPSPNIVSWTALIS---AHSNSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            ++S   R+ HA  L   +   S+  +  L+               F+ +   N VSWTA+IS   A+ N  + +++F +M R    +  PN+ TL S+   C                      H      +A +  Y R  +   ++ +F+  + RDVV + +MI G+A+     + +++   MR   + +    +            +     +H   +  G   ++++G  LID Y K G +S AR VF E L+  + ++W++M
Sbjct:  174 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRE---NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE-LTEKDLVSWSSM 436          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 62/258 (24.03%), Postives = 113/258 (43.80%), Query Frame = 3
Query:  123 VHARALKSS-QADRSIYNNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISAHSNSPLSLN---IFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            VH  ALK       ++ N+LI               F+++   +++SW ++I+  + + L +    +F+ +LR       P+Q T+ S+ K                            F  +AL+  YSR R    A+ +F E    D+V + AM+ G+ Q+     +L +FA M      S  + ++           + Q + +H +A+ SG D ++ V +G++D Y K G +S A+  FD ++ V + +AW  M
Sbjct:  337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR---CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD-SIPVPDDVAWTTM 589          

HSP 2 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 56/215 (26.05%), Postives = 93/215 (43.26%), Query Frame = 3
Query:  249 NIVSWTALISAHSNSP---LSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            ++V+W A+++ ++ S     +L +F  M +    S   +  TLA++FKTC                       D  +  S ++  Y +      A+  FD I   D V +  MI G  +N     +  VF+ MR   V    + ++           +EQ R IH +A+      +  VGT L+D Y K G + DA  +F + + ++N  AWNAM
Sbjct:  481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS---DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL-WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAM 690          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 49/218 (22.48%), Postives = 90/218 (41.28%), Query Frame = 3
Query:  228 FNHIPSPNIVSWTALISAHSNSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDE----NLSVLNSI 869
            F+ IP  N+ +W A IS             + +    +   PN  T  +    C                       D   C + L+ FY + +   +++ +F E+  ++ V + +++  + QN     +  ++   R   V ++ + +S           +E  R IH HAV + ++R + VG+ L+D YGK G + D+ + FDE    NL   NS+
Sbjct:  166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC-NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382          

HSP 2 Score: 73.9442 bits (180), Expect = 1.322e-12
Identity = 66/258 (25.58%), Postives = 101/258 (39.15%), Query Frame = 3
Query:  117 RIVHARALKS--SQADRSIYNNLITXXXXXXXXXXXXXXFNHIPSPNIVSWTALISA---HSNSPLSLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSDVGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAW 875
            R+VHAR +K+  S     + N LI                   P+ N+VSWT+LIS    + +   +L  F  M R      +PN  T    FK                         D  F G +    Y + R  D+A+K+FDEI ER++  + A I     + R  +++  F + R  D                    +     +HG  + SG D +V V  GLID YGK   +  +  +F E +   N+++W
Sbjct:   26 RVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE---GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV-FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE-MGTKNAVSW 278          
BLAST of FC916153 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.543e-13
Identity = 57/224 (25.45%), Postives = 102/224 (45.54%), Query Frame = 3
Query:  228 FNHIPSPNIVSWTALISAHSNSPL---SLNIFLSMLRHPTLSFLPNQRTLASLFKTCXXXXXXXXXXXXXXXXXXXXXXHDKPFCGSALVHFYSRFRSPDNAKKVFDEIRERDVVCYGAMIVGFAQNSRLVDSLSVFADMRSSD--VGSTMYCVSGXXXXXXXXXXMEQCRVIHGHAVVSGLDRNVIVGTGLIDGYGKAGIVSDARRVFDENLSVLNSIAWNAM 884
            F+ +    +  W A+++A++ +     +L++F  M +    S LP+  TL+++   C                             SAL+  YS+     +A  VF  + E+D+V +G++I G  +N +  ++L VF DM+  D  +      ++           +     +HG  + +GL  NV VG+ LID Y K G+   A +VF  ++S  N +AWN+M
Sbjct:  330 FSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK---SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI-ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF-TSMSTENMVAWNSM 548          
The following BLAST results are available for this feature:
BLAST of FC916153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
PP255_ARATH1.561e-1324.52Putative pentatricopeptide repeat-containing prote... [more]
PP253_ARATH1.561e-1322.13Putative pentatricopeptide repeat-containing prote... [more]
PP146_ARATH1.561e-1327.48Pentatricopeptide repeat-containing protein At2g03... [more]
PP319_ARATH2.039e-1324.71Pentatricopeptide repeat-containing protein At4g18... [more]
PP423_ARATH2.663e-1330.66Putative pentatricopeptide repeat-containing prote... [more]
PP151_ARATH2.663e-1324.51Pentatricopeptide repeat-containing protein At2g13... [more]
PP343_ARATH3.478e-1322.47Pentatricopeptide repeat-containing protein At4g31... [more]
PP347_ARATH4.543e-1324.03Pentatricopeptide repeat-containing protein At4g33... [more]
PP312_ARATH4.543e-1322.48Pentatricopeptide repeat-containing protein At4g14... [more]
PP197_ARATH4.543e-1325.45Pentatricopeptide repeat-containing protein At2g40... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60CH01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60CH01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC916153 ID=FC916153; Name=FC916153; organism=Citrus clementina; type=EST; length=886bp
CTTTGTGAATCATACTTGAGGAGCAGACCAAACGCTAACGAAACAAACTC
ACTTTCAGTTGCATGGCGCTTGACTTGAACCAGCAGCCACAGCCACAAAA
CACGAGCACAGACCCACGAATCGTACACGCAAGAGCCCTAAAATCATCAC
AAGCAGACCGTTCCATCTACAACAACTTAATCACCAACTACTCCAAATCA
AACCTCCTCTCCTACTCCCTCCGCCTCTTCAACCATATCCCATCACCCAA
CATCGTCTCATGGACGGCCCTGATCTCCGCTCACTCCAACTCCCCTCTCT
CCCTGAACATCTTCCTCTCCATGCTCCGCCACCCCACCCTATCATTTCTC
CCCAACCAGCGCACCTTAGCCTCCCTCTTCAAAACCTGCGCCTCCCTCTC
GCACGCCTTCCTTTTCGGCCTCTCCCTCCACTCCCTCTCCCTCAAGCTCT
CCTTGCACGACAAGCCCTTCTGCGGCTCCGCTCTCGTCCACTTCTATTCT
CGGTTTCGCTCACCCGACAATGCCAAGAAAGTGTTCGATGAAATTCGCGA
GAGAGACGTCGTGTGCTACGGGGCGATGATCGTGGGATTCGCGCAGAATT
CGCGGTTGGTGGACTCATTGTCGGTGTTTGCTGACATGAGAAGTTCCGAC
GTGGGGTCCACGATGTACTGCGTGTCGGGGGCGTTGCGTGCGGCTGCTGA
GCTGGCGGCGATGGAGCAATGCAGGGTCATTCATGGACATGCTGTTGTTT
CTGGTTTAGATAGGAATGTGATTGTCGGGACTGGATTGATCGATGGGTAT
GGGAAAGCTGGGATTGTTTCTGATGCTAGAAGGGTGTTTGATGAGAATCT
AAGTGTGTTAAATTCCATTGCTTGGAATGCTATGAT
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