FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_CANAL (ATP-dependent RNA helicase HAS1 OS=Candida albicans GN=HAS1 PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 9.078e-62 Identity = 120/164 (73.17%), Postives = 143/164 (87.20%), Query Frame = 1 Query: 394 NLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 + S T AI +GFT MT+VQA+TIPPLL+GRDVLGAA+TGSGKTLAFLIP+IE+L +LK KP NGT +II+TPTRELALQIF + R+LM FHSQT G+V+GGA+R+ EA +LAKGVNL+VATPGRLLDHL+NT+ FVF NLKALVIDEADRILE+GFE+EM Sbjct: 114 DFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELM-QFHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQ-FVFSNLKALVIDEADRILEIGFEDEM 275
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_LODEL (ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus GN=HAS1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.186e-61 Identity = 117/164 (71.34%), Postives = 141/164 (85.98%), Query Frame = 1 Query: 394 NLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 + S T AI +GF MT+VQA+TIPPLL+GRDVLGAA+TGSGKTLAFL+P++E+L +LK KP NGT +II+TPTRELALQIF + R LM +HSQT G+V+GGA+R+ EA +LAKGVNL+VATPGRLLDHL+NT+ FVF NLKALVIDEADRILE+GFEEEM Sbjct: 99 DFSEPTMKAIKEMGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVELLYSLKIKPRNGTAVIIITPTRELALQIFGVARQLM-EYHSQTCGIVIGGADRRQEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEIGFEEEM 261
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_GIBZE (ATP-dependent RNA helicase HAS1 OS=Gibberella zeae GN=HAS1 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.884e-61 Identity = 117/165 (70.91%), Postives = 145/165 (87.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS +T AI+ + FT MTE+Q R IPP L+GRDVLGAA+TGSGKTLAFLIP IE+LS+L+FKP NGTG+I+++PTRELALQIF + R+LM HSQT G+V+GGANR++EA++LAKGVNL++ATPGRLLDHL+NT FVF+NLK+LVIDEADRILE+GFE+EM Sbjct: 120 LKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELM-AHHSQTYGIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNT-PFVFKNLKSLVIDEADRILEIGFEDEM 282
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_CHAGB (ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum GN=HAS1 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.884e-61 Identity = 117/165 (70.91%), Postives = 145/165 (87.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS +T +I+ +GFT MTE+Q R IPPLL+G+DVLGAA+TGSGKTLAFLIP+IE+L++L+FKP NGTG+I++TPTRELALQIF + R+LM HSQT GVV+GGAN ++E D+L KGVNL++ATPGRLLDHLR SFVF+NLK+L+IDEADRILEVGFE+EM Sbjct: 117 LNLSDKTMMSINEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKPRNGTGVIVVTPTRELALQIFGVARELMKN-HSQTYGVVIGGANIRAEEDKLGKGVNLLIATPGRLLDHLRR-GSFVFKNLKSLIIDEADRILEVGFEDEM 279
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_ASPTN (ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=has1 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 1.004e-60 Identity = 112/165 (67.88%), Postives = 142/165 (86.06%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS T AI +GF +MTE+Q RTIPP L+GRD+LGAA+TGSGKTLAFLIP++E+LS L+FKP NGTG+II+TPTRELALQIF + ++L FHSQT G+V+GGANR++EA++L KGVNL++ATPGRLLDHL+NT+ FV++N K LV+DEADR L+VGFE E+ Sbjct: 103 LNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIIITPTRELALQIFGVAKELC-EFHSQTYGIVIGGANRRAEAEKLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAEL 266
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: HAS1_YARLI (ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica GN=HAS1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.449e-59 Identity = 111/166 (66.87%), Postives = 141/166 (84.94%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 ++ LS T ++ +GF +MT VQ +TIPPLL+GRDVLGAA+TGSGKTLAFLIP+IE+L LKFKP NGTG+I+++PTRELALQI+ + RDLM HSQT G+V+GG NR+ E ++L KGVNL+V TPGRLLDHL+N++ FVF+NLKAL+IDEADRILE+GFE+EM Sbjct: 135 TIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKLKFKPRNGTGVIVVSPTRELALQIYGVARDLMAN-HSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEM 299
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DDX18_DICDI (Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum GN=ddx18 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.772e-57 Identity = 108/166 (65.06%), Postives = 139/166 (83.73%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +L + T+ +I+ +GF MT +QA++I PLL G+D+LGAARTGSGKTLAFLIP+IE+L FKP NGTG+II++PTRELALQI+ + R+LM +H+QT G+V+GGA++K E +RL KGVNL+VATPGRLLDHL+NTK F+ +NLK L+IDEADRILEVGFEEEM Sbjct: 123 NLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELM-KYHTQTHGIVIGGASKKPEEERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEM 287
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH27_ARATH (DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana GN=RH27 PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.075e-54 Identity = 103/166 (62.05%), Postives = 134/166 (80.72%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SL+LS T +I +GF MT++QA+ IPPL+ G DVLGAARTGSGKTLAFLIP++E+L +KF P NGTG++++ PTRELA+Q + + ++L+ +HSQT G V+GG RK+EA+ LAKGVNL+VATPGRLLDHL NT F+F+NLK LV+DEADRILE FEE++ Sbjct: 158 SLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELL-KYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDL 322
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH51_ARATH (DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana GN=RH51 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.458e-53 Identity = 103/166 (62.05%), Postives = 134/166 (80.72%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SL+LS QT AI +GF MT++QA +I PLL G+DVLGAARTGSGKTLAFLIP++E+L +F P NGTG+I++ PTRELA+Q ++ +L+ HSQT +V+GG NR+SEA R+A G NL++ATPGRLLDHL+NTK+F++++LK LVIDEADRILE FEE+M Sbjct: 93 SLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELL-KHHSQTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDM 257
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DDX18_DROME (Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster GN=pit PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 4.516e-53 Identity = 94/163 (57.67%), Postives = 137/163 (84.05%), Query Frame = 1 Query: 397 LSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +S T AI +GFT MTE+Q++++ PLL GRD++GAA+TGSGKTLAFLIP++E+++ L+F P NGTG+II++PTREL++Q F ++++LM H T G+VMGG+NR+ E+++L KG+N++VATPGRLLDHL+N+ F+++NL+ L+IDE DRILE+GFEEE+ Sbjct: 194 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELM-AHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEEL 355 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |