FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ASPTN (ATP-dependent RNA helicase dbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dbp4 PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.724e-36 Identity = 79/163 (48.47%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L LS T S + A + ++T++Q+R + L GRD+LGAA+TGSGKTLAFLIP +E L ++ +G G +IL+PTRELA+QIF ++R +G +H ++G+V+GG + K E +RL K +N++V TPGR+L HL T F NL+ LV+DEADRI+++GF++ Sbjct: 51 LPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRK-VGRYHHFSAGLVIGGKSLKEEQERLGK-MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRIMDMGFQK 211
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ASPCL (ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus GN=dbp4 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.724e-36 Identity = 79/163 (48.47%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L LS T S + + F ++T++Q+R I L GRDVLGAA+TGSGKTLAFL+P +E L ++ +G G +IL+PTRELA+QIF ++R + G +H+ ++G+V+GG + + E +RL + +N++V TPGR+L HL T F NL+ LV+DEADRIL++GF++ Sbjct: 54 LPLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENLYRRQWAEHDGLGALILSPTRELAIQIFEVLRKI-GRYHTFSAGLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQ 214
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_NEUCR (ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa GN=dbp-4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36 Identity = 80/163 (49.08%), Postives = 115/163 (70.55%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L L T S + A F +T+VQ IP L G+D+LGAARTGSGKTLAFL+P +E L ++ +G G +I++PTRELA+QIF ++R + G HS ++G+V+GG + K EA+RL + +N++V TPGR+L HL T F NL+ LV+DEADRI+++GF++ Sbjct: 62 LPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKLYRARWTEYDGLGALIISPTRELAVQIFEVLRKI-GRNHSFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQ 222
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ASPFU (ATP-dependent RNA helicase dbp4 OS=Aspergillus fumigatus GN=dbp4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.252e-36 Identity = 78/163 (47.85%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L LS T S + + + ++T++Q+R I L GRD+LGAA+TGSGKTLAFL+P +E L ++ +G G +IL+PTRELA+QIF ++R + G +H+ ++G+V+GG + K E +RL + +N++V TPGR+L HL T F NL+ LV+DEADRIL++GF++ Sbjct: 52 LPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKI-GRYHTFSAGLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQ 212
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_EMENI (ATP-dependent RNA helicase dbp4 OS=Emericella nidulans GN=dbp4 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.941e-36 Identity = 77/163 (47.24%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L +S T S + + F ++T++Q+R I L GRDVLGAA+TGSGKTLAFL+P +E L ++ +G G +I++PTRELA+QIF ++R + G +H+ ++G+V+GG + K E +RL + +N++V TPGR+L HL T F NL+ LV+DEADRI+++GF++ Sbjct: 53 LPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQWSDHDGLGALIISPTRELAIQIFEVLRKI-GRYHTFSAGLVIGGKSLKEEQERLGR-MNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQK 213
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ASPNC (ATP-dependent RNA helicase dbp4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp4 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.941e-36 Identity = 77/163 (47.24%), Postives = 118/163 (72.39%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L LS T S + + + ++T++Q+R I L GRD+LGAA+TGSGKTLAFLIP +E L ++ +G G ++L+PTRELA+QIF ++R +G +H+ ++G+V+GG + + E +RL + +N++V TPGR+L HL T F NL+ LV+DEADRIL++GF++ Sbjct: 52 LPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILENLYRKQWSEHDGLGALVLSPTRELAIQIFEVLRK-VGRYHTFSAGLVIGGKSLREEQERLGR-MNILVCTPGRMLQHLDQTSFFETHNLQMLVLDEADRILDMGFQK 212
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_GIBZE (ATP-dependent RNA helicase DBP4 OS=Gibberella zeae GN=DBP4 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.841e-36 Identity = 79/162 (48.77%), Postives = 115/162 (70.99%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFE 876 L LS T ++ F ++T+VQAR +P L G+D+LGAA+TGSGKTLAFLIP +E L ++ +G G +I++PTRELA QIF ++R +G HS ++G+V+GG + K EA+RL + +N++V TPGR+L H T F NL+ LV+DEADRI+++GF+ Sbjct: 56 LPLSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLEKLYRAQWTEFDGLGALIISPTRELAAQIFEVLRK-VGTKHSFSAGLVIGGKSLKEEAERLDR-MNILVCTPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQ 215
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_CHAGB (ATP-dependent RNA helicase DBP4 OS=Chaetomium globosum GN=DBP4 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36 Identity = 80/162 (49.38%), Postives = 114/162 (70.37%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFE 876 L L T S + A F +T+VQ IP L GRD+LGAA+TGSGKTLAFL+P +E L K+ +G G +I++PTRELA+QIF ++R + G H ++G+V+GG + K EA+RL + +N++V TPGR+L HL T +F NL+ LV+DEADRI+++GF+ Sbjct: 58 LPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEKLYHAKWTEYDGLGALIISPTRELAVQIFEVLRKI-GRNHFFSAGLVIGGKSLKEEAERLGR-MNILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQ 217
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DDX31_HUMAN (Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 1.117e-35 Identity = 77/154 (50.00%), Postives = 110/154 (71.43%), Query Frame = 1 Query: 430 LGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTL--KFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +SMT VQ ++IP LL GRD L ++TGSGKTLA+ IP ++ L + K + ++G ++L PTRELALQ F V+ L+ F GV+MGG RKSE RL KG+N++++TPGRL+DH+++TK+ F L+ LV DEADRIL++GFE+++ Sbjct: 249 LKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDI 402
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_COCIM (ATP-dependent RNA helicase DBP4 OS=Coccidioides immitis GN=DBP4 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.117e-35 Identity = 73/162 (45.06%), Postives = 118/162 (72.84%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFE 876 L LS T + A F ++T++Q+R +P + GRD+LGAA+TGSGKTLAFL+P +E L ++ +G G +IL+PTRELA+QIF ++R + G +H+ ++G+V+GG + + E +RL + +N++V TPGR+L H+ T +F +++ LV+DEADRI+++GF+ Sbjct: 53 LPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENLYRKQWTEYDGLGALILSPTRELAIQIFEVLRKI-GRYHTFSAGLVIGGKSLQEEQERLGR-MNILVCTPGRMLQHMDQTAAFDTAHIQMLVLDEADRIMDMGFQ 212 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |