FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_MAGGR (ATP-dependent RNA helicase DBP4 OS=Magnaporthe grisea GN=DBP4 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.695e-34 Identity = 74/165 (44.85%), Postives = 114/165 (69.09%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS T + F ++T++QAR IP L GRD+LGAA+TGSGKTLAFL+P +E L ++ G ++L+PTRELA+Q F ++R + G H ++G+V+GG + + EA+ L++ +N+++ TPGR+L HL T F NL+ LV+DEADRI+++GF+ ++ Sbjct: 54 LPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKLYREQWTQEAKLGALVLSPTRELAVQTFQVLRKI-GRHHLFSAGLVIGGKSVREEAEALSR-MNILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDV 216
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_LODEL (ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus GN=DRS1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.784e-33 Identity = 77/165 (46.67%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L LS ++ LGFT T VQA TIP L G+D++ +A+TGSGKT A+LIP IE L L K + T IILTPTRELA+Q+ + R L + G+ +GG + K + +L ++++ATPGRL+DH+RN+ SF ++++ L+IDEADR+LE GF+EE+ Sbjct: 201 LQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIERL--LYVKNSTSTKAIILTPTRELAIQVHDVGRKLGQFVSNLNFGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVEDVQVLIIDEADRMLEEGFQEEL 363
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_KLULA (ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis GN=DRS1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.854e-33 Identity = 73/168 (43.45%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SL+LS + +LG+TS + +Q+ IP L G+D++ A TGSGKT AF+IP IE L +KPA+ T +++LTPTRELA+Q+ + +++ + T G+ +GG N + + L ++++ATPGR +DHLRN+ SF +++ LVIDEADR+LE GF+EE+ Sbjct: 237 SLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIE---RLLYKPAHIASTRVVVLTPTRELAIQVADVGKNIGKFVNGLTFGLAVGGLNLRQQEQALKTRPDIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEEL 401
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_ASHGO (ATP-dependent RNA helicase DRS1 OS=Ashbya gossypii GN=DRS1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32 Identity = 74/168 (44.05%), Postives = 109/168 (64.88%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SL+LS + ALG+T + +Q TIP L G+DV+ A TGSGKT AF+IP IE L +KPA T +++LTPTRELA+Q+ + + L T G+ +GG N + + L ++++ATPGR++DH+RN+ SF +++ LVIDEADR+LE GF++E+ Sbjct: 223 SLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIE---RLLYKPAKIASTRVLVLTPTRELAIQVADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDEL 387
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_DEBHA (ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii GN=DBP4 PE=3 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 3.365e-32 Identity = 72/165 (43.64%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S +T + F S+T++Q +TIP L G DV+G A+TGSGKTLAFLIP+IE L K +G +I++PTRELA+QIF ++ + G ++ ++G+V GG + K E +R++K +N++V TPGR+ HL + NL+ LV+DEADR L++GF++++ Sbjct: 51 LPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESLIRNKITEYDGLAALIISPTRELAVQIFEVLVKI-GKHNNFSAGLVTGGKDVKYEKERVSK-MNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQI 213
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: Y8611_DROME (Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster GN=CG8611 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32 Identity = 66/156 (42.31%), Postives = 106/156 (67.95%), Query Frame = 1 Query: 424 DALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTL--KFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 D L +T VQ +TIP +L G+DVL ++TGSGKTLA+ +P +E+L + + +G +++ PTREL +Q + +++ L+ + G ++GG +RKSE RL KG+N+++ TPGRL+DHL +T SF L+ L++DEADR+LE+G+E ++ Sbjct: 344 DLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDV 499
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_VANPO (ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DRS1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32 Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 SL LS + LG+T + +Q+ TIP LSG+D++ A TGSGKT AF+IP IE L +KPA T +I+LTPTRELA+QI + + + T G+ +GG N + + L ++++ATPGR +DH+RN+ SF +++ LV+DEADR+LE GF+EE+ Sbjct: 235 SLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPIIE---RLLYKPAKVASTRVIVLTPTRELAIQIADVGKKIGKYVSGLTFGLAVGGLNLRQQEQELKTRPDIVIATPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEEGFQEEL 399
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_KLULA (ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis GN=DBP4 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.394e-32 Identity = 72/165 (43.64%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S QT + F +TE+Q +IP L G DVLGAA+TGSGKTLAFLIP IE L K+ +G G +I++PTRELA+QI+ ++ + G + ++G+V+GG + E +R+++ +N+++ TPGR+L H+ F NL+ LV+DEADR L++GF+ + Sbjct: 46 LPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKLYREKWTDMDGLGALIISPTRELAMQIYEVLSKI-GKHTTFSAGLVIGGKDVTFEKERISR-INILIGTPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTL 208
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ASHGO (ATP-dependent RNA helicase DBP4 OS=Ashbya gossypii GN=DBP4 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 9.789e-32 Identity = 70/165 (42.42%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +SS T + + MT++Q IP L G DVLGAA+TGSGKTLAFL+P +E L ++ +G G ++++PTRELA+QI+ ++ + G + S ++G+V+GG + K E +R++K +N+++ TPGRLL H+ + NL+ LV+DEADR L++GF++ + Sbjct: 46 LPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKLYHERWTELDGLGALVISPTRELAMQIYEVLVKI-GKYMSFSAGLVIGGKDVKFEMERVSK-INILIGTPGRLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKAL 208
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_YEAST (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae GN=DBP4 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.279e-31 Identity = 72/165 (43.64%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S T + F +TE+QA +IP L G DVL AA+TGSGKTLAFL+P IE L K+ +G G +I++PTRELA+QI+ ++ + G S ++G+V+GG + K E +R+++ +N+++ TPGR+L HL NL+ LV+DEADR L++GF++ + Sbjct: 46 LPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKI-GSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTL 208 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |