FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_YEAS7 (ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) GN=DBP4 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.279e-31 Identity = 72/165 (43.64%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S T + F +TE+QA +IP L G DVL AA+TGSGKTLAFL+P IE L K+ +G G +I++PTRELA+QI+ ++ + G S ++G+V+GG + K E +R+++ +N+++ TPGR+L HL NL+ LV+DEADR L++GF++ + Sbjct: 46 LPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKI-GSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTL 208
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH32_ARATH (DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana GN=RH32 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.670e-31 Identity = 69/165 (41.82%), Postives = 106/165 (64.24%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S +T+ + + MT+VQ+ IP L GRD+LGAARTGSGKTLAF+IP +E L ++ P +G G II++PTRELA Q F ++ + +G FH ++G+++GG +N++V PGRLL H+ T +F L+ L++DEADR+L+ F+ ++ Sbjct: 76 LPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVGCIIISPTRELAAQTFGVL-NKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQL 239
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_PICGU (ATP-dependent RNA helicase DRS1 OS=Pichia guilliermondii GN=DRS1 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.670e-31 Identity = 73/168 (43.45%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPA--NGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +L LS + LG+T + +QA +IP + G+D++ A TGSGKT A+LIP IE L +KPA + T +I+LTPTRELA+Q+ + + L + G+ +GG N + + +L +++VATPGRL+DH+RN+ SF +NL+ LV+DEADR+LE GF+ E+ Sbjct: 202 ALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIE---RLIYKPAAVSATRVIVLTPTRELAIQVCDVGKKLGQFVANLNFGLAVGGLNLRQQEQQLKSRPDIVVATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVEL 366
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP7_PICGU (ATP-dependent RNA helicase DBP7 OS=Pichia guilliermondii GN=DBP7 PE=3 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 2.848e-31 Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 424 DALGFTSMTEVQARTIPPLLS-GRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPA---NGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 ++L F + T++Q IP LLS RD+ A+TGSGKTL+FL+P + L K P +G I+L PTRELA QI+ ++ L H G+V+GG +KSE R+ KGVN++VATPGRL DH+ NT S L+ L++DE DR++++GFEE Sbjct: 152 ESLRFKNPTQIQKSVIPSLLSTSRDLFVKAQTGSGKTLSFLLPILHKLMQEKKNPITRESGVFAIVLVPTRELANQIYGVLETLTRCHHQIVPGIVIGGEKKKSEKARIRKGVNILVATPGRLADHIENTTSLDLSQLRYLILDEGDRLIDLGFEE 307
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_LODEL (ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus GN=DBP4 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.858e-31 Identity = 69/165 (41.82%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L ++ T + F S+T++Q ++IP L G D++G ARTGSGKTLAFLIP IEIL +G +I++PTRELA+QIF ++ + G ++S ++G+V GG + + E +R+++ +N++V TPGR+ HL + NL+ LV+DEADR L++GF +++ Sbjct: 53 LPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEILLRNDITEYDGLAALIVSPTRELAVQIFEVLAKI-GKYNSFSAGLVTGGKDVQYEKERISR-MNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFRKQI 215
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_YARLI (ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica GN=DRS1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31 Identity = 70/166 (42.17%), Postives = 106/166 (63.86%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +LNLS I ALG+ + T +Q+RTIP L G+D++ A TGSGKT A++IP +E L K A T +++LTPTREL++Q+ + + L G+ +GG N + + L +++ATPGR +DH+RN+ SF +++ LVIDEADR+LE GF++E+ Sbjct: 256 TLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVA-ATKVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQELKTRPEVVIATPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQEL 420
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_CANAL (ATP-dependent RNA helicase DBP4 OS=Candida albicans GN=DBP4 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.287e-31 Identity = 69/165 (41.82%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L ++ T + F S+T++Q +TIP L G D++G ARTGSGKTLAFLIP IE L K +G +I++PTRELA+QIF ++ + G +++ ++G+V GG + + E +R+++ +N++V TPGR+ HL NL+ LV+DEADR L++GF++++ Sbjct: 53 LPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKI-GKYNTFSAGLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQI 215
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP7_DEBHA (ATP-dependent RNA helicase DBP7 OS=Debaryomyces hansenii GN=DBP7 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.082e-30 Identity = 73/156 (46.79%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 424 DALGFTSMTEVQARTIPPLLSG-RDVLGAARTGSGKTLAFLIPSI-EILSTLKFKPANGTGI--IILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 ++L F + T+VQ IP L++ RD+ A+TGSGKTL+FL+P +++S K+K +G+ IIL PTREL QI+ ++ L+ H G+V+GG +KSE RL KGVN++VATPGRL DH+ NT S L+ L++DE DR+ E+GFEE Sbjct: 178 ESLRFKAPTKVQRSVIPSLIATQRDLFVKAQTGSGKTLSFLLPIFHKLMSEEKYKITRESGLFAIILVPTRELCTQIYGVLETLVRCHHHIVPGIVIGGEKKKSEKARLRKGVNILVATPGRLADHMENTTSLDVSQLRWLILDEGDRLTELGFEE 333
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30 Identity = 79/161 (49.07%), Postives = 103/161 (63.98%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGF 873 L L Q A D++G+ + T +QA IP L GRD++G A TGSGKT AF +P IL L KP++ G++ L PTRELA QI L G S S V++GG + S++ L K ++IVATPGRLLDHL NTK F +NLK LV+DEADR+L++ F Sbjct: 57 LGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALP---ILQALMDKPSSFFGLV-LAPTRELAYQISQAFEGL-GSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDF 212
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_VANPO (ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP4 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30 Identity = 69/165 (41.82%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S+ T ++ F +T++Q +IP L G D+LGAA+TGSGKTLAFLIP +E L ++ +G G +I++PTRELA+QI+ ++ + G S ++G+V+GG + K E +R++K +N+++ TPGR+L H+ NL+ LV+DEADR L++GF++ + Sbjct: 46 LPISNSTLKGLNDSAFLKLTDIQRDSIPMSLKGYDILGAAKTGSGKTLAFLIPVLEKLYRERWTEFDGLGALIISPTRELAMQIYEVLLKI-GTSTSFSAGLVIGGKDVKFEMERISK-INILIGTPGRILQHMDQAIGLNTSNLQMLVLDEADRCLDMGFKKTL 208 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |