FC917080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH32_ORYSJ (DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica GN=Os07g0517000 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 4.113e-30 Identity = 69/166 (41.57%), Postives = 108/166 (65.06%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSF-VFQNLKALVIDEADRILEVGFEEEM 885 L LS++T+ + G+T M+E+Q +P L GRDVLGAA+TGSGKTLAF+IP +E L ++ P +G G I+L+P ++LA QIF++ + +G H ++ ++G E + +N++V TPGRLL H+ T +F Q + LVIDEAD++L+ F+E++ Sbjct: 85 LPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEKLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQK-VGKLHGFSAACIVGNRKGLDEEKAVINNMNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQV 249
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP7_CANAL (ATP-dependent RNA helicase DBP7 OS=Candida albicans GN=DBP7 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.113e-30 Identity = 74/156 (47.44%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 424 DALGFTSMTEVQARTIPPLLSGR-DVLGAARTGSGKTLAFLIPSI-EILSTLKFKPANGTGI--IILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 D L F T++Q IP L+S D+ A+TGSGKTLAF++P +++ KFK +G+ IILTPTRELA QI+ ++ L H G+V+GG +KSE RL KG N++VATPGRL DHL NTK+ L+ LV+DE D+++E+GFE+ Sbjct: 152 DHLRFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIILTPTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLADHLENTKTLDISQLRWLVLDEGDKLMELGFED 307
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_PHANO (ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum GN=DRS1 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 71/168 (42.26%), Postives = 106/168 (63.10%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 +++LS Q + A+GFT T +QA+ IP + G+DV+G A TGSGKT AFLIP IL L ++P T + I PTRELA+Q F++ L F T ++ GG + + + L ++++ATPGR +DH+ NT +F ++L+ LV+DEADR+LE GFE ++ Sbjct: 289 AMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIP---ILERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKL-ASFTDITFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQL 452
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_ENCCU (ATP-dependent RNA helicase DBP4 OS=Encephalitozoon cuniculi GN=DBP4 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 64/163 (39.26%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEE 879 L + + + + GF SM EVQ + IP L G D++G+++TG+GKTLAFL+P+++ L +L + +G G +++TPTRELALQIF ++ + + ++G++MGG + E ++ + +N++V TPGRLL HL+ N++ L++DEAD+++E+GF+E Sbjct: 9 LKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQRLVSLGWGGGDGLGCLVITPTRELALQIFDVL-SRIAKYTVLSTGLIMGGLEAEDELLKVNQ-MNILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGFKE 169
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_SCHPO (ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe GN=drs1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30 Identity = 70/168 (41.67%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 S+NLS + LGF T++Q +TIP L G+D++GAA TGSGKT AF++P IL L ++P T ++IL PTRELA+Q S+ + F + +GG + K + L K ++++ATPGR +DH+RN++ F +N++ +V+DEADR+LE GF +E+ Sbjct: 263 SMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVP---ILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKI-ASFTDIMVCLCIGGLSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADEL 426
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_CANGA (ATP-dependent RNA helicase DBP4 OS=Candida glabrata GN=DBP4 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30 Identity = 68/166 (40.96%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQ-TSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S T ++ F MT++Q +I L G DV G A+TGSGKTLAFL+P +E L ++ +G G +I++PTRELA+QI+ ++ + G H+Q ++G+V+GG + E +R+AK +N+++ TPGR+L H+ NL+ LV+DEADR L++GF++ + Sbjct: 46 LPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEKLYRERWTEFDGLGALIISPTRELAMQIYEVLVKI--GSHTQFSAGLVIGGKDVNFELERIAK-INILIGTPGRILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQKTL 208
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 72/167 (43.11%), Postives = 107/167 (64.07%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPAN--GTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS A + LG+ T +QA IP L+GRD+ +A TGSGKT AF +P++E L F+P T ++ILTPTRELA+QI S++++L F G+++GG + + + L +++VATPGR++DHLRN+ S +L L++DEADR+L+ GF E+ Sbjct: 172 LNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE---RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL-AQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEI 334
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DBP4_PICGU (ATP-dependent RNA helicase DBP4 OS=Pichia guilliermondii GN=DBP4 PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 67/165 (40.61%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGIIILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 L +S T + F S+T++Q + IP L DV+G ARTGSGKTLAFL+P IE L +G +I++PTRELA+Q F ++ + G ++S ++G+V GG + K E +R+++ +N+++ TPGR+ HL NL+ LV+DEADR L++GF +++ Sbjct: 51 LPISEGTYKGLLENNFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIEKLIRENITEYDGLAALIVSPTRELAVQTFEVLTKI-GKYNSFSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQI 213
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: RH28_ORYSJ (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica GN=Os12g0481100 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29 Identity = 74/167 (44.31%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 391 LNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTLKFKPANGTGI--IILTPTRELALQIFSIVRDLMGGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 LNLS A +ALG+ T +QA IP L+GRD+ G+A TGSGKT AF +P +L L F+P I +ILTPTRELA Q+ S++ L F +++GG + K + L +++VATPGR++DHLRN+ S ++L L++DEADR+LE+GF E+ Sbjct: 199 LNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLP---VLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKL-AQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEI 361
BLAST of FC917080 vs. ExPASy Swiss-Prot
Match: DRS1_CRYNE (ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans GN=DRS1 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.939e-29 Identity = 74/169 (43.79%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 388 SLNLSSQTQSAIDALGFTSMTEVQARTIPPLLSGRDVLGAARTGSGKTLAFLIPSIEILSTL-KFKPANGTGIIILTPTRELALQIFSIVRDLM--GGFHSQTSGVVMGGANRKSEADRLAKGVNLIVATPGRLLDHLRNTKSFVFQNLKALVIDEADRILEVGFEEEM 885 ++NLS A+ +L FT+ T +QAR IP L GRD+LG+A TGSGKT AF++P +E L + K +++L PTRELA+Q ++ + L GG + + +++GG + ++A L ++++ATPGRL+DHL NT SF L LVIDEADR+LE GF +E+ Sbjct: 226 AMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEKGGLDVRFA-LLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDEL 393 The following BLAST results are available for this feature:
BLAST of FC917080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917080 ID=FC917080; Name=FC917080; organism=Citrus clementina; type=EST; length=886bpback to top |