FC917624

Overview
NameFC917624
Unique NameFC917624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length805
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: COQ2_SCHPO (Para-hydroxybenzoate--polyprenyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=coq2 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.063e-26
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 1
Query:  247 WIDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAA---PPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGS--LDLAVVFPMYISGVFWTLVY 804
            W DL+  R  + YA+++R   P GT+LL  PC WSI MAA           KM+              C +NDL DR++D  VER++ RP+ASG L+                      N ++  LG +SL+ V  YP MKR T++PQ  LGLTF +GA++GW A+ G   ++ +VV P+Y+S + W ++Y
Sbjct:   57 WKDLFSKRW-QYYAEISRAGSPTGTYLLYSPCTWSILMAAYAYDSSLVNVTKMLALFGVGSFLMRSAGCVINDLWDRELDAKVERSKSRPLASGKLSVRQAISLLSVQLTASLGILLQLNPYTIKLGVASLVPVCIYPAMKRITYYPQVVLGLTFGYGAVMGWPALAGEACMNWSVVAPLYLSTISWIVLY 246          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_PSYIN (4-hydroxybenzoate octaprenyltransferase OS=Psychromonas ingrahamii (strain 37) GN=ubiA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25
Identity = 64/185 (34.59%), Postives = 95/185 (51.35%), Query Frame = 1
Query:  250 IDLYLPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            ++ +   + +AY +L R++KPIGT LL WP +W++ +AA    FPD  ++              C +ND  DR+ID  VERT+ RP+ SG  T                      N+ +  L  + LLL F+YP MKRFT  PQ  LGL F+W   + +AA   +L  AVV+ ++   + WT+ Y
Sbjct:    1 MNFFCKEKRQAYVELMRINKPIGTLLLLWPTLWALWIAAQG--FPDLGVLIVFSAGVFLMRSAGCVINDFADRNIDGFVERTKHRPLPSGRATSTEAIILFFILAIVSFLLVLTQNSLTIQLSFAGLLLAFAYPFMKRFTQLPQLVLGLAFSWSIPMAFAAQANALP-AVVWIIFAVNIIWTIAY 182          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBSL (4-hydroxybenzoate octaprenyltransferase OS=Vibrio splendidus (strain LGP32) GN=ubiA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            L  +A+AY +L R+++PIGT LL WP +WS+ +AA     PDF ++              C +ND  DR +D  V+RT+ RP+ SGL++                      N  +  L    + L F YP MKRFT  PQ +LGL F+W   + WAA    L  ++V+ +++    WT+ Y
Sbjct:    2 LATKAKAYWQLTRMNRPIGTLLLLWPTLWSLIIAAKG--MPDFDVLVVFILGVVLMRSAGCVINDFADRKVDGHVKRTKQRPLPSGLVSSKEAIVLFLVLAVVSFLLVLTMNPLTIKLSFIGVGLAFIYPFMKRFTHLPQLFLGLAFSWAIPMAWAAQTNELP-SIVWFIFVINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBPA (4-hydroxybenzoate octaprenyltransferase OS=Vibrio parahaemolyticus GN=ubiA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.895e-24
Identity = 59/178 (33.15%), Postives = 90/178 (50.56%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +A+AY +L R+D+PIG+ LL WP +W++ +AA     P + ++              C +ND  DR +D  V+RT+ RP+ SG +T                      N  +  L  + L+L F YP MKR+T  PQ +LGL F+W   + WAA  G L + V F +++    WT+ Y
Sbjct:    5 KAKAYWQLMRMDRPIGSLLLLWPTVWALVIAAQG--IPSWDVLIVFVLGVFLMRSAGCVINDFADRKVDGHVKRTKQRPLPSGKVTAKEAIGLFLVLAVSSFLLVLTMNPLTIQLSFAGLVLAFIYPFMKRYTHIPQLFLGLAFSWAIPMAWAAQTGELPVMVWF-VFVINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBHB (4-hydroxybenzoate octaprenyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ubiA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.895e-24
Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +A+AY +L R+D+PIG+ LL WP +W++ +AA     P + ++              C +ND  DR +D  V+RT+ RP+ SG +T                      N  +  L  + + L F YP MKR+T+ PQ +LGL F+W   + WAA  G L   V F +++    WT+ Y
Sbjct:    5 KAKAYWQLMRMDRPIGSLLLLWPTVWALVIAAQG--MPSWNVLIVFVLGVFLMRSAGCVINDFADRKVDGHVKRTKQRPLPSGKVTSKEAIGLFLVLGISSFLLVLTMNPLTIKLSFAGIFLAFIYPFMKRYTYLPQLFLGLAFSWAIPMAWAAQTGELPWIVWF-VFVINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_METFK (4-hydroxybenzoate octaprenyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ubiA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.938e-24
Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            L ++  AY +L RLDKPIG  LL WP +W I +A+P   +PD  ++              C +NDL DR+ D  VERTR RP+ +G +T                      N     L   +L L  SYPL KRF   PQAYLG+ F +G  + +AA+ G L L   + + ++ VFW + Y
Sbjct:    6 LRQKLEAYYRLTRLDKPIGILLLLWPTLWGIWLASPG--WPDGLVLFVFIAGTVLMRSAGCVMNDLADRNFDGHVERTRQRPLVTGDVTTKEAVLLALALSLVAFILVLQLNPLVVALSFPALFLAASYPLTKRFLSIPQAYLGIAFGFGIPMAFAAITGQLPLE-AWILLLANVFWAIAY 183          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_XYLFA (4-hydroxybenzoate octaprenyltransferase OS=Xylella fastidiosa GN=ubiA PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 57/174 (32.76%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            Y KLAR D+P+G  LL WP  W++ +AA  G  P +  +              C +ND  DR +D  VERTR+RP+ +G ++P                     N  + +L    L L  +YP +KR+T+ PQ YLGL F WG  + +AA++G +     + +Y++ + WT  Y
Sbjct:   23 YWKLARGDRPVGFLLLLWPTWWALWLAA--GGVPPWWTLCVFTTGIWLTRSAGCVINDYTDRWLDPHVERTRIRPLVTGAVSPRNALLMFATLMLIAFGLVLTMNQLTVLLSVVGLFLAMTYPYLKRYTYLPQVYLGLAFGWGIPMAFAAIQGKVP-TQAWLLYVANILWTTAY 193          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_AZOSE (4-hydroxybenzoate octaprenyltransferase OS=Azoarcus sp. (strain EbN1) GN=ubiA PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 61/174 (35.06%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  283 YAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            Y +L RLDKPIG  LL WP +W++ +AA    FP   ++              C +ND  DRD D  VERTR RP+ +G +T                      +   R L   +L L  SYP  KRF   PQAYLG+ F +G  +G+AAV+G +  A+ + + ++ +FW + Y
Sbjct:   14 YLRLMRLDKPIGILLLMWPTLWALWLAADG--FPPLHLIVIFALGTVLMRSAGCVINDYADRDFDGHVERTRTRPLTTGAVTVREALLLAAGLSLVSFVLILPLDPLVRWLSLPALFLAASYPYTKRFLAIPQAYLGIAFGFGIPMGFAAVQGEVP-AIAWLLLLANIFWAVAY 184          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBVY (4-hydroxybenzoate octaprenyltransferase OS=Vibrio vulnificus (strain YJ016) GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +A+AY +L R+D+PIGT LL WP +W++ +AA     PD+ ++              C +ND  DR +D  V+RT+ RP+ SG +T                      N  +  L  + ++L F YP MKR+T  PQ +LGL F+W   + WAA    L   V F   I+ + WT+ Y
Sbjct:    5 KAKAYWQLMRMDRPIGTLLLLWPTLWALIIAAEGT--PDWHVLLVFVLGVVLMRSAGCVINDFADRKVDGHVKRTQQRPLPSGRVTAKEAVILFLLLGISSFLLVLTMNPLTIQLSFAGIVLAFIYPFMKRYTHLPQLFLGLAFSWAIPMAWAAQANELPWVVWFVFAINAL-WTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBVU (4-hydroxybenzoate octaprenyltransferase OS=Vibrio vulnificus GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +A+AY +L R+D+PIGT LL WP +W++ +AA     PD+ ++              C +ND  DR +D  V+RT+ RP+ SG +T                      N  +  L  + ++L F YP MKR+T  PQ +LGL F+W   + WAA    L   V F   I+ + WT+ Y
Sbjct:    5 KAKAYWQLMRMDRPIGTLLLLWPTLWALIIAAEGT--PDWHVLLVFVLGVVLMRSAGCVINDFADRKVDGHVKRTQQRPLPSGRVTAKEAIILFLLLGISSFLLVLTMNPLTIQLSFAGIVLAFIYPFMKRYTHLPQLFLGLAFSWAIPMAWAAQANELPWVVWFVFAINAL-WTIAY 179          
The following BLAST results are available for this feature:
BLAST of FC917624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
COQ2_SCHPO1.063e-2636.65Para-hydroxybenzoate--polyprenyltransferase, mitoc... [more]
UBIA_PSYIN1.535e-2534.594-hydroxybenzoate octaprenyltransferase OS=Psychro... [more]
UBIA_VIBSL1.299e-2433.704-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_VIBPA2.895e-2433.154-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_VIBHB2.895e-2432.584-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_METFK4.938e-2435.914-hydroxybenzoate octaprenyltransferase OS=Methylo... [more]
UBIA_XYLFA6.449e-2432.764-hydroxybenzoate octaprenyltransferase OS=Xylella... [more]
UBIA_AZOSE6.449e-2435.064-hydroxybenzoate octaprenyltransferase OS=Azoarcu... [more]
UBIA_VIBVY1.100e-2333.714-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_VIBVU1.100e-2333.714-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA33CD02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917624 ID=FC917624; Name=FC917624; organism=Citrus clementina; type=EST; length=805bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGTATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATG
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