FC917624

Overview
NameFC917624
Unique NameFC917624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length805
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBCM (4-hydroxybenzoate octaprenyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 59/178 (33.15%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +ARAY +L R+D+PIG+ LL WP +W++ +AA     PD +++              C +ND  DR +D  V+RT  RP+ +GL++                      N  +  L    +LL F YP MKRFT  PQ  LGL F+W   + WAA   +L    V+ +++    WT+ Y
Sbjct:    5 KARAYWQLMRMDRPIGSLLLLWPTLWALLLAAQG--LPDLRVLVVFVLGVFLMRSAGCVINDYADRHVDGHVKRTSQRPLPAGLVSAKEALLLFVLLAVSSFLLVLTMNTLTIQLSFIGILLAFVYPFMKRFTHLPQLVLGLAFSWSIPMAWAAQANTL-TPQVWVLFLINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBCH (4-hydroxybenzoate octaprenyltransferase OS=Vibrio cholerae GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 59/178 (33.15%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +ARAY +L R+D+PIG+ LL WP +W++ +AA     PD +++              C +ND  DR +D  V+RT  RP+ +GL++                      N  +  L    +LL F YP MKRFT  PQ  LGL F+W   + WAA   +L    V+ +++    WT+ Y
Sbjct:    5 KARAYWQLMRMDRPIGSLLLLWPTLWALLLAAQG--LPDLRVLVVFVLGVFLMRSAGCVINDYADRHVDGHVKRTSQRPLPAGLVSAKEALLLFVLLAVSSFLLVLTMNTLTIQLSFIGILLAFVYPFMKRFTHLPQLVLGLAFSWSIPMAWAAQANTL-TPQVWVLFLINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_VIBC3 (4-hydroxybenzoate octaprenyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 59/178 (33.15%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +ARAY +L R+D+PIG+ LL WP +W++ +AA     PD +++              C +ND  DR +D  V+RT  RP+ +GL++                      N  +  L    +LL F YP MKRFT  PQ  LGL F+W   + WAA   +L    V+ +++    WT+ Y
Sbjct:    5 KARAYWQLMRMDRPIGSLLLLWPTLWALLLAAQG--LPDLRVLVVFVLGVFLMRSAGCVINDYADRHVDGHVKRTSQRPLPAGLVSAKEALLLFVLLAVSSFLLVLTMNTLTIQLSFIGILLAFVYPFMKRFTHLPQLVLGLAFSWSIPMAWAAQANTL-TPQVWVLFLINALWTIAY 179          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_TOLAT (4-hydroxybenzoate octaprenyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.100e-23
Identity = 60/181 (33.15%), Postives = 87/181 (48.07%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +P Q + Y +LARLDKPIGT LL WP +W++ +A+     P F ++              C +ND  DR  D  V+RT  RP+ +G LT                      N F+  L    LLL   YP MKR T  PQ  LG+ F+W   + + AV G L +   + ++++ + WT+ Y
Sbjct:    5 IPAQWQPYWQLARLDKPIGTLLLLWPTLWALWLAS--AGVPSFSLLLIFTAGVFVMRSAGCVINDYADRKFDGYVKRTASRPLPAGRLTAVRALLFFLLLVLIAFVLVWQLNQFTIYLSVGGLLLAAIYPFMKRVTSLPQVVLGMAFSWAIPMAYGAVVGQLTV-TTWLLFLANLVWTIAY 182          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_RALSO (4-hydroxybenzoate octaprenyltransferase OS=Ralstonia solanacearum GN=ubiA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.437e-23
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 1
Query:  265 PRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            P +   YA+L R+DKPIGT LL WP +W++ MAA  GH P   ++              C +ND  DRD D  V+RTR RP+ +GL+ P                     N  ++ L  +++L+  +YP  KRF   PQAYLG+ F +G  + +AAV+  +  A  + M  + V W + Y
Sbjct:    8 PSRLALYARLVRIDKPIGTLLLLWPTLWAMWMAA-DGH-PPPALVAIFVVGTVLMRSAGCAINDWADRDFDKHVKRTRERPLTAGLIAPWEALAVAAVLALVAFTLILPLNALTKWLSVAAVLIAGTYPFFKRFFAIPQAYLGIAFGFGIPMAYAAVQDQVP-APAWLMLAANVLWAIAY 184          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_METCA (4-hydroxybenzoate octaprenyltransferase OS=Methylococcus capsulatus GN=ubiA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.451e-23
Identity = 64/178 (35.96%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  271 QARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            +A AY +L R DKPIG +LL WP +W++ +A      PD  +               C +ND  DR+ D  VERTRLRPIA+G +T                      N  +  L      L  SYP  KR+T  PQAYLGL F W   + +AA  GS+ + V + +Y + V W L+Y
Sbjct:   10 RADAYWRLMRFDKPIGIFLLLWPALWALWIAGEGR--PDPGVAAVIVFGVVLMRAAGCVINDYADREFDPHVERTRLRPIAAGEVTSKEALILFMVLCLTAFALVLTMNWLTIALSVPGAFLAASYPFTKRYTHLPQAYLGLAFGWAIPMTFAAQTGSIPV-VAWALYAATVLWALIY 184          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_YERE8 (4-hydroxybenzoate octaprenyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ubiA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.200e-23
Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  277 RAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            RAY +L R+DKPIG+ LL WP +W++ +A      PD K++              C VND  DR ID  V+RT  RP+ SGL++                      N+ +  L  ++L L + YP MKR T  PQ  LG  F W   +G+AAV  +L L V + + ++ + WT+ Y
Sbjct:   11 RAYCRLMRIDKPIGSLLLLWPTLWALWLAGKG--IPDTKILIVFVLGVFFMRAAGCVVNDYADRRIDGFVKRTASRPLPSGLISERESKILFVVLVLLSFGLVLTLNSMTIWLSLAALALAWVYPFMKRVTHLPQVVLGAAFGWSIPMGFAAVSENLPL-VCWLLLLANICWTVAY 183          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_SACD2 (4-hydroxybenzoate octaprenyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=ubiA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.200e-23
Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            AYAKL RLD+PIG +L+ WP +WS+ +AA     PD+ ++              C +ND  DR ID  V RT  RP+ +GL+TP                     N  +  L     LL F YP MKR+T  PQ  LG  F W   + +AA    L  A ++ +Y + V WT+ Y
Sbjct:   20 AYAKLMRLDRPIGIYLVLWPTLWSLWIAA--DGLPDWDVLVIFVLGVVLMRSAGCVINDFADRKIDGHVRRTANRPLVTGLITPKQAVLFFVALLVIAFILVLFTNPLTIKLSFGGALLAFCYPFMKRYTQLPQIVLGAAFAWSIPMAFAAQTNQLPEA-IWVLYTAVVLWTVAY 191          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_NITEC (4-hydroxybenzoate octaprenyltransferase OS=Nitrosomonas eutropha (strain C91) GN=ubiA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  280 AYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            AYA+L RLDKPIG  LL WP +W + +AA     PD  ++              C +ND  DR ID  V RTR RP+A+G+++                      N  + +L   +LLL  SYP  KRF   PQAYLG+ F++G  + +AA  G++   + + + ++ +FW + Y
Sbjct:    9 AYARLTRLDKPIGILLLLWPTLWGLWLAADG--MPDPMILVIFVLGTILMRSAGCAINDFADRKIDPHVSRTRNRPLATGIISSREALLVAAGLSLCAFLLILPLNLLTILLSVPALLLAISYPFTKRFFAMPQAYLGIAFSFGIPMAFAAQTGTVP-PLAWLLVLANLFWVIAY 180          
BLAST of FC917624 vs. ExPASy Swiss-Prot
Match: UBIA_COXB1 (4-hydroxybenzoate octaprenyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=ubiA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23
Identity = 59/181 (32.60%), Postives = 89/181 (49.17%), Query Frame = 1
Query:  262 LPRQARAYAKLARLDKPIGTWLLAWPCMWSITMAAPPGHFPDFKMMXXXXXXXXXXXXXXCTVNDLLDRDIDNMVERTRLRPIASGLLTPXXXXXXXXXXXXXXXXXXXXXNNFSRILGASSLLLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAVKGSLDLAVVFPMYISGVFWTLVY 804
            L +Q   Y +L R DKP+G +LL WP +W++ +AA     P FK+               C VND  DR +D  V+RT++RP+ASG ++                      N  +  L    +LL   YP +KRFT  PQ +LG+ F+W   + +AA  G +  AV + ++ + V W +VY
Sbjct:    4 LRQQIPHYLRLMRFDKPVGIFLLLWPTLWAVWIAAKGA--PSFKIAVIFIAGSVVMRAAGCIVNDFADRHLDKHVQRTQMRPLASGSVSVTEAMLLFAVLSLIAFTLVLLLNRLTVELAVIGILLALVYPFLKRFTHLPQLWLGIAFSWSIPMAFAATVGHVP-AVAWLLFFAAVLWPIVY 181          
The following BLAST results are available for this feature:
BLAST of FC917624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
UBIA_VIBCM1.100e-2333.154-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_VIBCH1.100e-2333.154-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_VIBC31.100e-2333.154-hydroxybenzoate octaprenyltransferase OS=Vibrio ... [more]
UBIA_TOLAT1.100e-2333.154-hydroxybenzoate octaprenyltransferase OS=Tolumon... [more]
UBIA_RALSO1.437e-2334.444-hydroxybenzoate octaprenyltransferase OS=Ralston... [more]
UBIA_METCA2.451e-2335.964-hydroxybenzoate octaprenyltransferase OS=Methylo... [more]
UBIA_YERE83.200e-2334.664-hydroxybenzoate octaprenyltransferase OS=Yersini... [more]
UBIA_SACD23.200e-2335.434-hydroxybenzoate octaprenyltransferase OS=Sacchar... [more]
UBIA_NITEC4.180e-2334.294-hydroxybenzoate octaprenyltransferase OS=Nitroso... [more]
UBIA_COXB14.180e-2332.604-hydroxybenzoate octaprenyltransferase OS=Coxiell... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA33CD02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CD02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917624 ID=FC917624; Name=FC917624; organism=Citrus clementina; type=EST; length=805bp
CGCGTTTTCCGGAGGAGCAGATACCTAAAACCATCGTTGTCTCTTCTCCT
CAGCGGCAACAACAATCCATCTAATCCAGTCCTAAACCCTAAACTTAGCC
CTCATGTAGCCAAATTGACGAATCATTACCGTTGGATGCCAAATTCTGAA
CAAAATTTCAGATACGTATGGGTAGCAAGCATCTGTACAACACCGTCGCA
GTCAAGTGTTGAGAAAGAGACTAGTAGTAGTAATGAGAAATCATCGTGGA
TTGACTTGTATTTGCCGAGACAAGCGAGGGCTTATGCGAAGCTGGCTCGG
CTTGATAAGCCGATCGGGACGTGGCTGCTGGCTTGGCCTTGTATGTGGTC
AATTACAATGGCGGCGCCACCTGGACACTTTCCGGATTTCAAAATGATGG
CGCTCTTTGGCTGTGGCGCTCTCCTTCTACGCGGGGCCGGGTGTACCGTT
AATGACCTCCTTGATAGGGATATTGATAATATGGTGGAACGCACAAGGTT
AAGGCCCATTGCGAGTGGTCTTCTAACACCGTTTCAAGGACTTTCTTTTC
TTGGGTTTCAATTGCTTTTAGGTCTTGGGATTCTTCTCCAGTTGAATAAT
TTTAGCCGCATTCTGGGGGCTTCATCTTTGCTGTTAGTCTTCTCCTACCC
CCTCATGAAGAGGTTTACTTTTTGGCCTCAAGCCTATCTAGGTTTGACCT
TCAACTGGGGAGCCTTATTAGGATGGGCTGCAGTCAAAGGGAGTTTAGAT
CTGGCTGTTGTGTTCCCAATGTACATTTCTGGAGTTTTTTGGACTCTCGT
GTATG
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