FC917647

Overview
NameFC917647
Unique NameFC917647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length910
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SCPB_NANOT (Carboxypeptidase S1 homolog B OS=Nannizzia otae (strain CBS 113480) GN=SCPB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.363e-20
Identity = 59/175 (33.71%), Postives = 79/175 (45.14%), Query Frame = 1
Query:  346 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS------------------------------------YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQ 756
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  + PD  +  LNP+SWN   N+L+LD PV VG S                                    Y++ + D T  G +  A     F   W + F  +  RD  IS   ESYGG Y P  +      NQ
Sbjct:   85 FFWFFEARKDPENAPLSIWMNGGPGSSSM-FGMMTENGPCFVNPDSNSTRLNPHSWNNEVNMLYLDQPVQVGLSYDTLANFTRNLVTDEITKLEPGDPIPEQNATFLVGTYASRNMDTTAKGTRNAAIALWHFAQVWFQEFPGYHPRDSRISIATESYGGRYGPAFTAFFEEQNQ 258          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SCP54_ARATH (Putative serine carboxypeptidase-like 54 OS=Arabidopsis thaliana GN=SCPL54 PE=5 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.457e-19
Identity = 59/203 (29.06%), Postives = 97/203 (47.78%), Query Frame = 1
Query:  178 ILFICIIFYLGSAFSTDPVAQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLK 786
            +L +CI   L S F  DP  +                +   ++GY ++       LF++F ++  +  S P+V+WL+GGPGCSS                     Y+   S+ +++N++++D P+  GFSY+N S+D+  + D   + D   FL  + +        DFYI+GESY GHY+P L+  +   N+      INLK
Sbjct:   11 LLIVCIFSQLSSTFG-DPSVK----------------DLGQHAGYFSLPRSKSARLFHFFFQS-RNNSSDPVVIWLSGGPGCSS-----------------SNQRYI---SYLKISNLIYVDQPIRTGFSYANDSTDLRHDEDS-VSNDLYDFLQAFFKEHPNLAKDDFYITGESYAGHYIPALASRVHNGNEKKEGIVINLK 174          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.821e-19
Identity = 65/194 (33.51%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  310 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISD 876
            YVTV E++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+     + D   A D +  L  + +   +F+   FYI  ESYGG     +S  + +  Q  G    N  G  +G++        L    + +S  L+ +
Sbjct:   42 YVTVREDA--RMFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTRLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTTDAYAKDLD-TVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISLELHKAIQ-QGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSVSLLDN 224          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.602e-19
Identity = 62/197 (31.47%), Postives = 83/197 (42.13%), Query Frame = 1
Query:  319 VNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS-------NTSSD-----------------------------ITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 795
            VN+      F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D  +   NPYSWN   N+L++D P  VGFSY        N  +D                              T N  +  A     F   W + F ++K  +  +S   ESYGG Y P  +      N+      I  +G M
Sbjct:   74 VNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAFTSYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.928e-19
Identity = 62/192 (32.29%), Postives = 92/192 (47.92%), Query Frame = 1
Query:  250 DRVGKLPGQNFNVNFAH-YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 822
            DR+  LP   F  +    YSGY+  N  S ++LFY +  AV D  S+  ++WL GGPGC+    G   E GP  I     +  LNP SW   AN+L+LD P G G+S    +   T    +  + D +  L  + ++F     +  Y+ GESYG  +    ++A++          IN  G  + + LT DY
Sbjct:   59 DRIKSLP--EFKGSLPELYSGYLEAN--SDKSLFYTYAPAVVD--SETFIVWLQGGPGCAG-TLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTI---EEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLN----INFMGVGIVSGLTADY 236          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18
Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  310 YVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPF--HIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISD 876
            YVTV +++   +F+W   A    ++    PLV+WL GGPG SS  +G  EEIGP    +KP   T       W Q A++LF+D+PVG GFSY NT+     + D   A D +  L  + +   +F+   FYI  ESYGG     +S  + +  Q  G    N  G  +G++        L    + +S  L+ +
Sbjct:   42 YVTVRKDAH--MFWWLYYATNPCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDTQLKPRNTT-------WLQWASLLFVDNPVGTGFSYVNTTDAYAKDLD-TVASDMMVLLKSFFDCHKEFQTVPFYIFSESYGGKMAAGISVELYKAVQ-QGTIKCNFSGVALGDSWISPVDSVLSWGPYLYSMSLLDN 224          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.927e-18
Identity = 54/175 (30.86%), Postives = 79/175 (45.14%), Query Frame = 1
Query:  346 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS------------------------------------YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRD--FYISGESYGGHYVPQLSKAIIRHNQ 756
            F+WF EA +DP++ PL +W+NGGPG SS+ +G   E GP  +  D  +  LNP+SWN   N+L++D PV VG S                                    Y++ + + T +G +  A     F   W + F  +  R+    I+ ESYGG Y P  +      NQ
Sbjct:   85 FFWFFEARKDPENAPLGIWMNGGPGSSSM-FGMMTENGPCFVNADSNSTRLNPHSWNNEVNMLYIDQPVQVGLSYDTLANFTRNLVTDEITKLKPGEPIPEQNATFLVGTYASRNMNTTAHGTRHAAMALWHFAQVWFQEFPGYHPRNNKISIATESYGGRYGPAFTAFFEEQNQ 258          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SPCA_TRIEQ (Carboxypeptidase S1 homolog A OS=Trichophyton equinum GN=SCPA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.445e-17
Identity = 60/188 (31.91%), Postives = 78/188 (41.49%), Query Frame = 1
Query:  346 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 795
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.445e-17
Identity = 60/188 (31.91%), Postives = 78/188 (41.49%), Query Frame = 1
Query:  346 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 795
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  I  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
BLAST of FC917647 vs. ExPASy Swiss-Prot
Match: SPCA_TRIRU (Carboxypeptidase S1 homolog A OS=Trichophyton rubrum GN=SCPA PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.194e-17
Identity = 59/188 (31.38%), Postives = 78/188 (41.49%), Query Frame = 1
Query:  346 FYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY------------------------------------SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYIS--GESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 795
            F+WF EA EDP + PL +WLNGGPG SS+  G  +E GP  +  D K+   N +SWN   N+L++D P  VGFSY                                    S+ +   T N     A     F   W + F + K  +  IS   ESYGG Y P  +      N+      I  +G M
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGPCWVNEDSKSTTNNSFSWNNKVNMLYIDQPNQVGFSYDVPTNITYSTINDTISVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTITEEGEM 269          
The following BLAST results are available for this feature:
BLAST of FC917647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
SCPB_NANOT2.363e-2033.71Carboxypeptidase S1 homolog B OS=Nannizzia otae (s... [more]
SCP54_ARATH4.457e-1929.06Putative serine carboxypeptidase-like 54 OS=Arabid... [more]
RISC_RAT5.821e-1933.51Retinoid-inducible serine carboxypeptidase OS=Ratt... [more]
SPCA_NANOT7.602e-1931.47Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
SXA2_SCHPO9.928e-1932.29Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
RISC_MOUSE1.694e-1832.99Retinoid-inducible serine carboxypeptidase OS=Mus ... [more]
SCPB_TRIRU4.927e-1830.86Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]
SPCA_TRIEQ2.445e-1731.91Carboxypeptidase S1 homolog A OS=Trichophyton equi... [more]
SCPA_TRITO2.445e-1731.91Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
SPCA_TRIRU3.194e-1731.38Carboxypeptidase S1 homolog A OS=Trichophyton rubr... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AA03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917647 ID=FC917647; Name=FC917647; organism=Citrus clementina; type=EST; length=910bp
TTAAGTTCTGTTCAGCAGATAAACTGAACAAAGAAAAAAAAAAAATTCCT
CAGAACACTATCATTGGCTCCAACGTTTTTGCTTGATTATGTCTTCTTTA
TAAGTCGCAGTACCCCAGTACACTAAACCATATAAAAAATGGCTTATAAT
CCAAAAGGGGCTTCCTTTCTTGTTCAAATCTTGTTCATTTGCATAATTTT
TTATCTGGGCAGTGCCTTTTCAACAGACCCAGTTGCCCAGCAAAAACTTG
ACAGAGTTGGGAAGCTACCTGGGCAAAATTTCAATGTCAACTTTGCCCAT
TACTCTGGTTATGTCACAGTCAACGAAGAATCCGGGAGGGCTCTCTTTTA
TTGGTTCGTTGAAGCTGTTGAAGATCCTGATTCCAAGCCTCTTGTGCTTT
GGCTCAATGGAGGGCCTGGGTGTTCATCCATTGCTTATGGAGAGGCAGAG
GAAATAGGTCCTTTTCACATCAAGCCAGATGGGAAGACCTTATACTTGAA
TCCTTACTCTTGGAATCAAGTTGCCAACATTCTGTTTCTTGATTCCCCCG
TTGGTGTTGGTTTTTCATATTCAAATACATCCTCTGATATTACGACCAAT
GGCGATAAAAGGACTGCGGAGGATTCCCTAAAATTTTTACTAAAGTGGTT
AGAACGGTTTTCACAATTTAAAGGAAGGGATTTCTACATCTCCGGGGAGA
GTTATGGAGGGCATTATGTTCCTCAGTTAAGCAAAGCAATCATAAGGCAC
AACCAAGCAACTGGGGAAAAAGCAATTAATCTGAAGGGCTACATGGTGGG
AAATGCTCTAACTGATGATTACCACGATTACTTGGGCCTTTTCCAGTTTT
GGTGGTCAGCTGGTTTGATATCTGATGATACGTACAAGCAACTAAACCTT
CTATGTGATT
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