FC917652

Overview
NameFC917652
Unique NameFC917652
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length915
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_ECOK1 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Escherichia coli O1:K1 / APEC GN=pgsA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            +PT+LTL RV  +P  +  FY+   W       IF  AAVTDW DG++AR+    + FGAFLDPVADK++VA  +VL+              W +T+PA  +I REI +SA+REW A    +   +VAV+ +GK K
Sbjct:    5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_ECO57 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Escherichia coli O157:H7 GN=pgsA PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            +PT+LTL RV  +P  +  FY+   W       IF  AAVTDW DG++AR+    + FGAFLDPVADK++VA  +VL+              W +T+PA  +I REI +SA+REW A    +   +VAV+ +GK K
Sbjct:    5 IPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_YERE8 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=pgsA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 59/138 (42.75%), Postives = 81/138 (58.70%), Query Frame = 3
Query:  462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            L +PT LTL RV  +P  +  FY+   W       IF+ AA TDW DG++AR+ +  + FGAFLDPVADK+MVA  LVL+              W +T+PA  +I REI +S++REW A    +   +VAV+ +GK K
Sbjct:    3 LNIPTWLTLFRVVLIPFFVLAFYLPFVWAPMVCAIIFVFAAATDWFDGFLARRWKQTTRFGAFLDPVADKVMVAIALVLVAEH--------YHVWWITLPAATMIAREIIISSLREWMAEIGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_SALTY (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Salmonella typhimurium GN=pgsA PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            +PT+LTL RV  +P  +  FY+   W    +  IF  AA+TDW DG++AR+    + FGAFLDPVADK++VA  +VL+              W +T+PA  +I REI +SA+REW A    +   +VAV+ +GK K
Sbjct:    5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_SALTI (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Salmonella typhi GN=pgsA PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            +PT+LTL RV  +P  +  FY+   W    +  IF  AA+TDW DG++AR+    + FGAFLDPVADK++VA  +VL+              W +T+PA  +I REI +SA+REW A    +   +VAV+ +GK K
Sbjct:    5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_SALPA (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Salmonella paratyphi A GN=pgsA PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.139e-22
Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            +PT+LTL RV  +P  +  FY+   W    +  IF  AA+TDW DG++AR+    + FGAFLDPVADK++VA  +VL+              W +T+PA  +I REI +SA+REW A    +   +VAV+ +GK K
Sbjct:    5 IPTLLTLFRVILIPFFVVVFYLPFAWAPMVSALIFCIAAITDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEH--------YHSWWVTLPAATMIAREIIISALREWMAELGKR--SSVAVSWIGKVK 130          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_BLOPB (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=pgsA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 3
Query:  459 ILTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAAS 821
            I+ +PT LTL RV  VP     FY+   W     T +F  AAVTDW DG++AR+ +  ++FG FLDPVADK+M+ A LVL+              W +T+PA  II RE+ + A+REW A+
Sbjct:    3 IINIPTYLTLLRVVMVPFFTVMFYLPVRWAPMICTIMFFVAAVTDWFDGFLARRWKQTTSFGKFLDPVADKVMIVAALVLIAEH--------FHTWWVTLPASIIIIREVIILALREWVAA 115          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_WIGBR (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Wigglesworthia glossinidia brevipalpis GN=pgsA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.703e-18
Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  462 LTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWKLQ 881
            L +PT LTL R+  VP  I  FY+        +  IFI AA+TDW DG++ARK+   + FGAFLDPVADK++V   L+L+      +  F    + +T+P++ +I REI +S++REW A      L +V++ +  K  +Q
Sbjct:    3 LNIPTCLTLFRLIIVPFFIIVFYLPFSNASFYSAIIFILAALTDWFDGFLARKLNQTTCFGAFLDPVADKIIVVIGLILI------IEYFHS--FWITIPSLIMIIREIIISSLREWMAEIGKNNLLSVSLISKLKTSIQ 134          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_RICBR (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Rickettsia bellii (strain RML369-C) GN=pgsA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.904e-18
Identity = 51/136 (37.50%), Postives = 79/136 (58.09%), Query Frame = 3
Query:  468 LPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTKLLEAVAVNNLGKWK 875
            LP  LT+ R+AA+P++I TFY++S   R     +F+ A++TD+ DGYIARK  L ++FG  LDP+ADKL+V   +++L  K            +  +P + I+ RE  +S +RE+ A        +V V+ L K K
Sbjct:    7 LPNYLTIARIAAIPVIILTFYINSPLARMLGALLFVLASITDFFDGYIARKYNLVTSFGKMLDPIADKLLVGCVIIMLLKK----------SDVDEIPCLLILAREFLVSGLREFLALVKV----SVPVSTLAKTK 128          
BLAST of FC917652 vs. ExPASy Swiss-Prot
Match: PGSA_BLOFL (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Blochmannia floridanus GN=pgsA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.450e-18
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:  459 ILTLPTILTLGRVAAVPLLICTFYVDSWWGRTTTTSIFIAAAVTDWLDGYIARKMRLGSTFGAFLDPVADKLMVAATLVLLCTKPLELPVFGQVPWLLTVPAIAIIGREITMSAVREWAASQNTK 833
            +  +P  LTL R+  VP  +  FY   +W     T IF  AA+TDW DG++AR+    S  G FLDP+ADK+M+   L+L+ ++   +       W +T+P  +II REI +S++RE  A  + K
Sbjct:    7 VFNIPMYLTLFRIIMVPCFVAVFYWPIYWSPMLCTLIFFIAAITDWFDGFLARRWNQTSRIGGFLDPIADKIMIITALILI-SEHFHV-------WWMTLPISSIIIREILISSLRECIARVDNK 123          
The following BLAST results are available for this feature:
BLAST of FC917652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PGSA_ECOK18.724e-2342.65CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_ECO578.724e-2342.65CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_YERE81.139e-2242.75CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_SALTY1.139e-2241.91CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_SALTI1.139e-2241.91CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_SALPA1.139e-2241.91CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_BLOPB8.165e-2143.80CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_WIGBR1.703e-1839.29CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_RICBR2.904e-1837.50CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
PGSA_BLOFL8.450e-1837.60CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA55AA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA55AA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917652 ID=FC917652; Name=FC917652; organism=Citrus clementina; type=EST; length=915bp
TAACAATGGCAGCTTCGCTCTGCGCTACCCCATACAAACAACTCGTTTTT
CGCCACATCACCACCCGTAAAATATCTTCTCCAAAACTCTACCCCTCTCC
CTTTACCTCTCTCTCCGGGTGCAGGATACCCCCGTGCGCACTCCCCGTCC
CCTCCCCCTCCCCCTCCGCGCACGTTAGCCTGCAACCCCATAACAGCCTT
AGCCTAAGCCTTCCCTTCTCTGGCTTCCGCTACCGTAGCCCCAAACTATA
TATCTCTTCTCGCACCGGTGACACCACCACTCGATCCTCGACGAATAAAG
CCGAAGTTACCGGGTCGGATCCGGAATCTCCTTCGGATCCCGGGTCGGGT
CTCGTCGCTGACATGGATCATCAGGACAATGTCAAGGCCGTTAATGGCGG
TTGGTATTGCGATCAAACGCCGTCACCATCAATTCAGCAACACCAACCGT
CTAATAAGATTCTCACTTTGCCTACAATCTTAACGCTCGGCCGCGTAGCT
GCCGTTCCGCTTCTCATTTGCACTTTTTACGTGGATAGTTGGTGGGGGAG
GACAACGACTACAAGTATTTTTATTGCTGCAGCAGTCACAGATTGGCTCG
ATGGCTACATTGCTCGAAAGATGAGATTAGGCTCTACCTTTGGTGCATTT
TTGGATCCAGTAGCCGATAAGCTTATGGTTGCTGCTACATTGGTACTACT
GTGTACGAAACCTTTGGAATTGCCGGTGTTTGGGCAAGTGCCTTGGTTAC
TGACTGTACCTGCAATTGCAATTATTGGTAGAGAGATAACAATGTCTGCA
GTCAGAGAATGGGCTGCTTCTCAGAATACTAAGCTTTTAGAGGCTGTCGC
TGTAAATAACCTTGGCAAGTGGAAACTGCAACACAGATGATTGCACTATC
CATCCTTCTCACTAC
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