FC917665

Overview
NameFC917665
Unique NameFC917665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_RAT (Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Dld PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.521e-63
Identity = 130/221 (58.82%), Postives = 157/221 (71.04%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAIKAAQLG KT CIEK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++   V ++L  MM QK  AV  LT GI  LFK+NKV +V G+G+    ++V+  T +G   V+  KNI+IATGS+V   PGITIDE  IVSSTGAL+L +VP+KLVVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+KQ  KF L T
Sbjct:   56 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHLAHGKDFASRGIEIPEVRLNLEKMMEQKRSAVKALTGGIAHLFKQNKVVHVNGFGKITGKNQVTATTADGSTQVIGTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNT 276          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_CRIGR (Dihydrolipoyl dehydrogenase, mitochondrial OS=Cricetulus griseus GN=DLD PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 6.006e-63
Identity = 129/221 (58.37%), Postives = 157/221 (71.04%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAIKAAQLG KT CIEK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  L  GI  LFK+NKV +V G+G+    ++V+    +G + V+  KNI+IATGS+V   PGITIDE  IVSSTGAL+L +VP+KLVVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+KQ  KF L T
Sbjct:   56 AAIKAAQLGFKTVCIEKNDTLGGTCLNVGCIPSKALLNNSHYYHLAHGRDFASRGIELSEVRLNLEKMMEQKSSAVKALIGGIAHLFKQNKVVHVNGFGKITGKNQVTATKADGSSQVIGTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQKQGFKFKLNT 276          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.747e-62
Identity = 127/221 (57.47%), Postives = 155/221 (70.14%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAIKAAQLG KT CIEK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  LT GI  LFK+NKV  V GYG+    ++V+    +G   V+  KNI+IATGS+V   PGITIDE  +VSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RLG++VT VE    +    +D E+ K FQR L+KQ  KF L T
Sbjct:   56 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLEKMMEQKSNAVKALTGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEVTPFPGITIDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVELLGHVGGIGIDMEVSKNFQRILQKQGFKFKLNT 276          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_MOUSE (Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus musculus GN=Dld PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.981e-62
Identity = 130/244 (53.28%), Postives = 161/244 (65.98%), Query Frame = 1
Query:  136 RGFASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKT 861
            R +A    E D            AAIK+AQLG KT CIEK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++   V ++L  MM QK  AV  LT GI  LFK+NKV +V G+G+    ++V+    +G   V+  KNI++ATGS+V   PGITIDE  IVSSTGAL+L +VP+KLVVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L++Q  KF L T
Sbjct:   33 RTYADQPIEADVTVIGSGPGGYVAAIKSAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEIPEVRLNLEKMMEQKHSAVKALTGGIAHLFKQNKVVHVNGFGKITGKNQVTATKADGSTQVIDTKNILVATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQRQGFKFKLNT 276          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_YEAST (Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=LPD1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.084e-62
Identity = 130/256 (50.78%), Postives = 167/256 (65.23%), Query Frame = 1
Query:  115 KYSFSLTRGFASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKG------KNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 861
            K +FS T    + +  +D            AAIKAAQLG  T C+EKRG LGGTCLNVGCIPSKALL++SH++H+        G+  +  +++++      KD AV  LT GIE LFKKNKVTY KG G F   +++ V  ++G    VK       KNII+ATGS+V   PGI IDE++IVSSTGAL+L E+PK+L +IG G IGLEMGSV++RLGS+VTVVEF   I  SMDGE+ K  Q+ L+KQ + F L T
Sbjct:   11 KRAFSSTVRTLTINKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLST 266          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_TRYCR (Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi GN=LPD PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.084e-62
Identity = 124/221 (56.11%), Postives = 159/221 (71.95%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK-QKMKFMLKT 861
            A+IKAAQLG+KT C+EKRGALGGTCLNVGCIPSKALLH++H+YH+A  +FA +G+     V +D   M  QK++AV  LT G+E LFKKNKVTY KG G F +   + V+ ++G   + + K  IIATGS+   LP +  DEK ++SSTGALAL  VPK +VVIG G IGLE+GSVWARLG++VTVVEFA    P++D ++      +L K +KMKFM  T
Sbjct:   26 ASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHVYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAKVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTST 246          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_RHOCA (Dihydrolipoyl dehydrogenase OS=Rhodobacter capsulatus GN=lpd PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.084e-59
Identity = 121/216 (56.02%), Postives = 153/216 (70.83%), Query Frame = 1
Query:  208 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 855
            AI+ AQLGLKT C+E RGALGGTCLNVGCIPSKALLH++H  HE   +F   G+  + V+VD           +   T+GIE LFKKNKVTY++G+G   +P +V V     G+ V   KNI+IATGS+   LPGI IDE+ +V+STGAL+L +VPK +VVIGAG IGLE+GSV+ARLG+EVTVVE+   I P MD E+ K  QR L +Q +KF+L
Sbjct:   19 AIRCAQLGLKTACVEGRGALGGTCLNVGCIPSKALLHATHELHEVHENFEKMGLMGAKVKVDWAK--------IDGNTKGIEFLFKKNKVTYLRGWGSIPAPGQVKV-----GDEVHTAKNIVIATGSESSGLPGIEIDEQTVVTSTGALSLAKVPKSMVVIGAGVIGLELGSVYARLGAEVTVVEYLDAITPGMDAEVAKGLQRILTRQGLKFVL 221          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEAE (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas aeruginosa GN=lpd3 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.871e-59
Identity = 117/220 (53.18%), Postives = 157/220 (71.36%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS-FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAI+A QLGLK  C+E R  LGGTCLNVGC+PSKALLH+S +Y  A    FA  G++ S  E+DL  MM QKD++V+ LTRG+E LF+K+KV ++KG+        V V   +GG+  ++ ++I+IATGS+   LPG+ +D +RI+ STGAL L EVP+ LVVIGAG IGLE+GSVW RLG++VTV+E+   I P +DGE  +  QR+L +Q M+F L T
Sbjct:   19 AAIRAGQLGLKVACVEGRETLGGTCLNVGCMPSKALLHASELYAAASGGEFARLGIRVSP-ELDLAQMMKQKDESVAALTRGVEFLFRKHKVQWIKGWARLQGEGRVGVALADGGHAQLEARDIVIATGSEPAPLPGVPVDNQRILDSTGALELVEVPRHLVVIGAGVIGLELGSVWRRLGAQVTVLEYLERICPGLDGETARTLQRALTRQGMRFRLGT 237          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEPU (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putida GN=lpd3 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.531e-58
Identity = 118/218 (54.13%), Postives = 153/218 (70.18%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 855
            AAI+A QLGL   C+E R  LGGTCLNVGC+PSKALLH+S +Y  A    FA  G++     ++L  MM QKD++V+ LT+GIE LF+KNKV ++KG+G      +V V   +G  T ++ K+I+IATGS+   LPG+TID +RI+ STGAL+L +VPK LVVIGAG IGLE+GSVW RLGS+VTV+E+   I P  D E  K  Q++L KQ M F L
Sbjct:   18 AAIRAGQLGLTVACVEGRSTLGGTCLNVGCMPSKALLHASELYEAASGDEFAHLGIEVKPT-LNLAQMMKQKDESVTGLTKGIEYLFRKNKVDWIKGWGRLDGVGKVVVKAEDGSETALQAKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPQVPKHLVVIGAGVIGLELGSVWRRLGSQVTVIEYLDRICPGTDTETAKTLQKALAKQGMVFKL 234          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_MANSE (Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.410e-58
Identity = 121/220 (55.00%), Postives = 156/220 (70.91%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAIKAAQLG+K   +EK  +LGGTCLNVGCIPSKALLH++H+YH A H F   G++   V+ +  AMM  K  AV  LT GI  LF+KNKV  V+G G  ++P++V V   +G  T V  KNI+IATGS+V   PG+T DEK+I++STGAL+L  VPKK++VIGAG IGLE+GSV+ RLG++VT +EF   I    +D E+ K + R L KQ MKF L+T
Sbjct:   45 AAIKAAQLGMKVVSVEKEPSLGGTCLNVGCIPSKALLHNTHLYHMAKHDFKHRGIETGEVKFNFKAMMDYKVNAVKALTGGIAMLFQKNKVKLVRGAGTIVAPNKVEVKGEKGVET-VNTKNILIATGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADVTAIEFLGSIGGIGIDMEVSKDY-RILAKQGMKFKLET 262          
The following BLAST results are available for this feature:
BLAST of FC917665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH_RAT3.521e-6358.82Dihydrolipoyl dehydrogenase, mitochondrial OS=Ratt... [more]
DLDH_CRIGR6.006e-6358.37Dihydrolipoyl dehydrogenase, mitochondrial OS=Cric... [more]
DLDH_PIG1.747e-6257.47Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
DLDH_MOUSE2.981e-6253.28Dihydrolipoyl dehydrogenase, mitochondrial OS=Mus ... [more]
DLDH_YEAST5.084e-6250.78Dihydrolipoyl dehydrogenase, mitochondrial OS=Sacc... [more]
DLDH_TRYCR5.084e-6256.11Dihydrolipoyl dehydrogenase OS=Trypanosoma cruzi G... [more]
DLDH_RHOCA3.084e-5956.02Dihydrolipoyl dehydrogenase OS=Rhodobacter capsula... [more]
DLDH3_PSEAE6.871e-5953.18Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas aerug... [more]
DLDH3_PSEPU1.531e-5854.13Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas putid... [more]
DLDH_MANSE3.410e-5855.00Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA21AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA21AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917665 ID=FC917665; Name=FC917665; organism=Citrus clementina; type=EST; length=861bp
AATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGCAAGTCT
TGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGA
ATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCG
GCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTA
CGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCG
AGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCC
TCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTC
TTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTG
CTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATT
GAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCGA
GTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACA
CTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAG
TCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGG
AGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTGGGGCAG
GCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTTGGTTCAGAG
GTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCATGGATGGGGA
AATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGATGAAATTCA
TGCTCAAAACT
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