FC917665
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR2_RAT (Thioredoxin reductase 2, mitochondrial OS=Rattus norvegicus GN=Txnrd2 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11 Identity = 56/194 (28.87%), Postives = 86/194 (44.33%), Query Frame = 1 Query: 208 AIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762 A +AAQLG K + + LGGTC+NVGCIP K L+H + + + +G + + V+ + AM V +L G + KV Y F++ V G T + K+I+IATG K + + ++S L E P K +V+GA Y+ LE +G + TV+ Sbjct: 57 AKEAAQLGRKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKK-LMHQAALLGGMIRDAQHYGWEVAQPVQHNWKAMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVNEHTVHGVDKAGKVTQLSAKHIVIATGGRPKYPTQVKGALEHGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVM 249
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR2_HUMAN (Thioredoxin reductase 2, mitochondrial OS=Homo sapiens GN=TXNRD2 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.395e-11 Identity = 59/218 (27.06%), Postives = 90/218 (41.28%), Query Frame = 1 Query: 136 RGFASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762 RG A+ + D A +AAQLG K ++ R LGGTC+NVGCIP K L+H + + + ++G + + V D M V +L G + KV Y F+ V G ++ +IIIATG + I + ++S L E P K +V+GA Y+ LE +G + T++ Sbjct: 31 RGAAAGQRDYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKK-LMHQAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTIM 247
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR2_DROME (Thioredoxin reductase 2, mitochondrial OS=Drosophila melanogaster GN=Trxr-2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.968e-11 Identity = 47/180 (26.11%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 232 LKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHG--VKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGG-NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762 +K T + + +GGTC+NVGCIP K L+H + + EA+H ++G V +++ D ++ + ++ + KV YV F + + G + V + +++A G + P I + ++S + P + +V+GAGY+GLE LG E TV+ Sbjct: 64 VKPTPVGTKWGIGGTCVNVGCIPKK-LMHQASLLGEAVHEAVAYGWNVDDTNIRPDWRKLVRSVQNHIKSVNWVTRVDLRDKKVEYVNSMATFRDSHTIEYVAMPGAEHRQVTSEYVVVAVGGRPR-YPDIPGAVELGITSDDIFSYEREPGRTLVVGAGYVGLECACFLKGLGYEPTVM 241 The following BLAST results are available for this feature:
BLAST of FC917665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 223
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Sequences
The
following sequences are available for this feature:
EST sequence >FC917665 ID=FC917665; Name=FC917665; organism=Citrus clementina; type=EST; length=861bpback to top |