FC917665

Overview
NameFC917665
Unique NameFC917665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.461e-41
Identity = 97/211 (45.97%), Postives = 127/211 (60.19%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQ 837
            AAI+AAQLG K T +EK   LGG CLNVGCIPSKAL+++ H Y  A HS    G+   +V VD   +   K   V+ LT G+ GL K NKV  VKG   F+  + V V       T    KN IIATGS    LP     E R+++STGALAL E+PKKLVVIG GYIG E+G+ +A  G+E+ ++E   +I+P  + ++     R L+K+
Sbjct:   24 AAIRAAQLGQKVTVVEK-ATLGGVCLNVGCIPSKALINAGHRYENAKHS-DDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRVMDENSAQTYTF-KNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKK 230          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.591e-39
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEG-GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 804
            AAI+ AQLGL TT +E R A GGTCLN GCIPSKAL+ +S + H+A  +  S GV F+   VD+  M   KD  V+ LTRG+E L K   V  V+G  EF+    V V    EG G+  +  ++ I+ATGS   ++PG   D + I+SS  ALAL  VP+KL+V+GAGYIG+E+ +V+A+LG+EVTVVE   D++P  + +I
Sbjct:   24 AAIRGAQLGLDTTLVE-RDAYGGTCLNHGCIPSKALISASDVAHDARQA-ESMGV-FADPAVDMAGMTEWKDGVVTRLTRGVESLCKNAGVNLVEGTAEFVDDGTVRVAHGGEGQGSESLSFEHAIVATGSRPMAVPGFEFDGEHILSSKDALALESVPEKLLVVGAGYIGMELSTVFAKLGAEVTVVEMLDDVLPGYEDDI 222          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_CHLMU (Dihydrolipoyl dehydrogenase OS=Chlamydia muridarum GN=lpdA PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.715e-39
Identity = 91/219 (41.55%), Postives = 136/219 (62.10%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEK--RIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 855
            AAI AAQ GLKT  IE+R A GGTCLN GCIPSKALL S+ +  +  H+    G+  +   +D PAM+ +KD  V ++  G+ GL + NK+T   G G  IS +EV +  +    +V+K ++II+ATGS+ ++ PG+   ++  RI+ STG L L E+P+K+ +IG G IG E  S++  LGSEV+V+E +  I+   + +I K       +  ++FML
Sbjct:   19 AAITAAQAGLKTALIEEREA-GGTCLNRGCIPSKALLASAEIVAQIRHA-DQFGIHINGFSIDYPAMVQRKDTVVRSIRDGLNGLIRSNKITVFSGRGSLISSTEVKI--LGETPSVIKAQSIILATGSEPRAFPGVPFSQQSPRILCSTGVLNLKEIPQKMAIIGGGVIGCEFASLFHTLGSEVSVIEASQQILALNNPDISKTMFDKFTRHGIRFML 233          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_CHLTR (Dihydrolipoyl dehydrogenase OS=Chlamydia trachomatis GN=lpdA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.545e-39
Identity = 91/220 (41.36%), Postives = 136/220 (61.82%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGI--TIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 858
            AAI AAQ GLKT  IEKR A GGTCLN GCIPSKALL  + +  +  H+    G+      ++ PAM+ +KD  V ++  G+ GL + NK+T   G G  IS +EV +  +    +V+K  +II+ATGS+ ++ PGI  + +  RI+ STG L L E+P+K+ +IG G IG E  S++  LGSEV+V+E ++ I+   + +I K       +Q ++F+L+
Sbjct:   19 AAITAAQAGLKTALIEKREA-GGTCLNRGCIPSKALLAGAEVVTQIRHA-DQFGIHVEGFSINYPAMVQRKDSVVRSIRDGLNGLIRSNKITVFSGRGSLISSTEVKI--LGENPSVIKAHSIILATGSEPRAFPGIPFSAESPRILCSTGVLNLKEIPQKMAIIGGGVIGCEFASLFHTLGSEVSVIEASSQILALNNPDISKTMFDKFTRQGLRFVLE 234          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH1_PSEAE (Dihydrolipoyl dehydrogenase OS=Pseudomonas aeruginosa GN=lpdV PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.347e-38
Identity = 88/219 (40.18%), Postives = 136/219 (62.10%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMH--SFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 855
            AAI+A QLG+ T  +E   ALGGTCLNVGCIPSKAL+H++  Y +A H  S ++ G++  +  +D+   +  KD  V  LT G+  L KK+ V  V+G+   +    V+V+   GG+  ++ +++++A GS    LP + +  K ++SST ALA   +PK+LVV+G GYIGLE+G+ + +LG EV VVE    I+P  D E+ K   ++L +  ++  L
Sbjct:   21 AAIRAGQLGIPTVLVEG-AALGGTCLNVGCIPSKALIHAAEEYLKARHYASRSALGIQVQAPSIDIARTVEWKDAIVDRLTSGVAALLKKHGVDVVQGWARILDGKSVAVELAGGGSQRIECEHLLLAAGSQSVELPILPLGGK-VISSTEALAPGSLPKRLVVVGGGYIGLELGTAYRKLGVEVAVVEAQPRILPGYDEELTKPVAQALRRLGVELYL 237          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH2_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=bfmBC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.686e-38
Identity = 89/224 (39.73%), Postives = 136/224 (60.71%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPS-------EVSVDTIEGG-NTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AAI+AAQLGLKT  +EK   LGGTCL+ GCIPSKALL S+ +Y  A  +    GV+ + V ++   +  +K   V  L  G+  L KK K+    GYG  + PS        +SV+   G  N ++  K +IIATGS  + LPG+ +D K +++S  AL + E+P+ ++++G G IG+E  S+    G +VTV+E+A  I+P+ D EI K+ +  L+K+ ++F+
Sbjct:   19 AAIRAAQLGLKTAVVEKE-KLGGTCLHKGCIPSKALLRSAEVYRTAREA-DQFGVETAGVSLNFEKVQQRKQAVVDKLAAGVNHLMKKGKIDVYTGYGRILGPSIFSPLPGTISVERGNGEENDMLIPKQVIIATGSRPRMLPGLEVDGKSVLTSDEALQMEELPQSIIIVGGGVIGIEWASMLHDFGVKVTVIEYADRILPTEDLEISKEMESLLKKKGIQFI 240          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_ZYMMO (Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis GN=lpd PE=3 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.945e-37
Identity = 84/219 (38.36%), Postives = 135/219 (61.64%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKT 861
            AAI+AAQL LK   +E R  LGG CLN GCIP+K+LL S+ +YHE M +  ++G+     + DL  ++A+  +  + L  G++ L +KNKV  + G G+     ++ V+T EG   +++ K+IIIATG+  + LP +  D K I +   AL    +PKKL+VIG+G IG+E  S +A  G+EV++VE A  I+P  D E+     ++ +K+ ++ + ++
Sbjct:   19 AAIRAAQLNLKVALVE-RVHLGGICLNWGCIPTKSLLRSAEVYHE-MQNAEAYGLTSFKPDFDLDKIIARSREVATRLASGVKTLLRKNKVEVISGVGQLTGNQQMLVETTEGEEKILEAKDIIIATGARARQLPNVHSDGKHIWTYHHALKPPAMPKKLLVIGSGAIGIEFASFYADFGAEVSIVEHAPQILPMEDAEVSAYVAKAFKKRGIRILTQS 235          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_CHLPN (Dihydrolipoyl dehydrogenase OS=Chlamydia pneumoniae GN=lpdA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.393e-37
Identity = 88/218 (40.37%), Postives = 128/218 (58.72%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLK 858
            AAI AAQ  L+T  IE+  A GGTCLN GCIPSKAL+  +++     H+    G+      +D PAM  +K+  V  + +G+EGL + NK+T +KG G  +S +EV V  I    T++K  +II+ATGS+ +  PG+     RI+SSTG L L  +PKKL +IG G IG E  S++  LG E+TV+E    I+   + E+ +       KQ ++ + K
Sbjct:   19 AAITAAQSKLRTALIEEDQA-GGTCLNRGCIPSKALIAGANVVSHIKHA-EQFGIHVDGYTIDYPAMAKRKNTVVQGIRQGLEGLIRSNKITVLKGTGSLVSSTEVKV--IGQDTTIIKANHIILATGSEPRPFPGVPFSS-RILSSTGILELEVLPKKLAIIGGGVIGCEFASLFHTLGVEITVIEALDHILAVNNKEVSQTVTNKFTKQGIRILTK 231          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH3_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=acoL PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.151e-36
Identity = 83/212 (39.15%), Postives = 133/212 (62.74%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKF--SSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 834
            AA+ AAQ G     I+K G LGGTCLN GCIP+K+LL S+++  +  H+  S G++    ++ VD   M ++K + VS L +G++ L KKN++  VKG   F+S  ++ ++  E G  + +   ++IA+GS+   LP    D + I+ S  AL+L+E+P  LV++G G IG E   ++ARLGS+VT++E A  ++P+ D +I + FQ  LE+
Sbjct:   15 AAVSAAQQGRNVLLIDK-GKLGGTCLNEGCIPTKSLLESANVLDKIKHA-DSFGIELPAGAISVDWSKMQSRKQQVVSQLVQGVQYLMKKNQIQVVKGTASFLSERKLLIEG-ENGKEIREADQVLIASGSEPIELPFAPFDGEWILDSKDALSLSEIPSSLVIVGGGVIGCEYAGLFARLGSQVTIIETADRLIPAEDEDIARLFQEKLEE 223          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_THESC (Dihydrolipoyl dehydrogenase OS=Thermus scotoductus GN=lpd PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.669e-36
Identity = 90/215 (41.86%), Postives = 131/215 (60.93%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNE-VPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMK 846
            AAI+ AQLGLK   +E    +GG CLNVGCIP+KALLH++   H  +      G+K +  E+DL  + A +D  V  LT G+ GL K NKV  ++G+  F  P E+ V+    G      ++ IIATGS+   L G    E  +  ST AL + E +PK+L+VIG G +GLE+G ++ RLGSEVT++E+  +I+P+ D E     +++LEK+ +K
Sbjct:   18 AAIRGAQLGLKVLAVEA-AEVGGVCLNVGCIPTKALLHAAETVHH-LKGAEGFGLK-AKPELDLKKLGAWRDGVVKKLTGGVAGLLKGNKVELLRGFARFKGPREIEVNGETYG-----AQSFIIATGSEPMPLKGFPFGED-VWDSTRALRVEEGIPKRLLVIGGGAVGLELGQIYHRLGSEVTLIEYMPEILPAGDRETAALLRKALEKEGLK 223          
The following BLAST results are available for this feature:
BLAST of FC917665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH1_BACSU6.461e-4145.97Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH2_HALMA1.591e-3948.02Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
DLDH_CHLMU2.715e-3941.55Dihydrolipoyl dehydrogenase OS=Chlamydia muridarum... [more]
DLDH_CHLTR3.545e-3941.36Dihydrolipoyl dehydrogenase OS=Chlamydia trachomat... [more]
DLDH1_PSEAE1.347e-3840.18Dihydrolipoyl dehydrogenase OS=Pseudomonas aerugin... [more]
DLDH2_BACSU6.686e-3839.73Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_ZYMMO1.945e-3738.36Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis G... [more]
DLDH_CHLPN7.393e-3740.37Dihydrolipoyl dehydrogenase OS=Chlamydia pneumonia... [more]
DLDH3_BACSU2.151e-3639.15Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_THESC3.669e-3641.86Dihydrolipoyl dehydrogenase OS=Thermus scotoductus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA21AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA21AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917665 ID=FC917665; Name=FC917665; organism=Citrus clementina; type=EST; length=861bp
AATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGCAAGTCT
TGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGA
ATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCG
GCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTA
CGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCG
AGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCC
TCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTC
TTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTG
CTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATT
GAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCGA
GTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACA
CTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAG
TCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGG
AGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTGGGGCAG
GCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTTGGTTCAGAG
GTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCATGGATGGGGA
AATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGATGAAATTCA
TGCTCAAAACT
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