FC917665

Overview
NameFC917665
Unique NameFC917665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: STHA_MYCBP (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.231e-25
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 804
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G FI P  + V D      T V G  IIIATG+      G+  DE+R++ S G L L  +P  +VV+GAG IG+E  S++A LG++VTVVE   +++   D E+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEV 218          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: STHA_MYCBO (Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis GN=sthA PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.231e-25
Identity = 70/202 (34.65%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEI 804
            AAI +A+LG     +E+   LGG C+N G IPSK L   + +Y   M+    +G  +   +   PA ++A+    +      +     +N+V  + G+G FI P  + V D      T V G  IIIATG+      G+  DE+R++ S G L L  +P  +VV+GAG IG+E  S++A LG++VTVVE   +++   D E+
Sbjct:   18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAALGTKVTVVEKRDNMLDFCDPEV 218          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_STAES (Mercuric reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=merA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 75/219 (34.25%), Postives = 125/219 (57.08%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AAIKA + G K   +E RG +GGTC+N+GC+PSK +L +  +   A ++  + G++ S+   DL  +  QKD  VS + +     L ++     ++G   FI    + V+   G N  +  K+ +IATG+   V  +PG+  +E   ++ST AL L EVP++L VIG+GYI  E+G ++  LG+EVT+++ +  +  + D EI +    SL +Q +  +
Sbjct:  100 AAIKANENGAKVAMVE-RGTVGGTCVNIGCVPSKTMLRAGEINGLAQNNPFT-GLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVN---GQN--ITSKSFLIATGASPAVPEIPGM--NEVDYLTSTSALELKEVPQRLAVIGSGYIAAELGQMFHNLGTEVTLMQRSERLFKTYDPEISEAIDESLTEQGLNLI 309          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_STAAU (Mercuric reductase OS=Staphylococcus aureus GN=merA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 75/219 (34.25%), Postives = 125/219 (57.08%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AAIKA + G K   +E RG +GGTC+N+GC+PSK +L +  +   A ++  + G++ S+   DL  +  QKD  VS + +     L ++     ++G   FI    + V+   G N  +  K+ +IATG+   V  +PG+  +E   ++ST AL L EVP++L VIG+GYI  E+G ++  LG+EVT+++ +  +  + D EI +    SL +Q +  +
Sbjct:  100 AAIKANENGAKVAMVE-RGTVGGTCVNIGCVPSKTMLRAGEINGLAQNNPFT-GLQTSTGAADLAQLTEQKDGLVSQMRQEKYIDLIEEYGFDLIRGEASFIDDKTIQVN---GQN--ITSKSFLIATGASPAVPEIPGM--NEVDYLTSTSALELKEVPQRLAVIGSGYIAAELGQMFHNLGTEVTLMQRSERLFKTYDPEISEAIDESLTEQGLNLI 309          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_PSEAE (Mercuric reductase OS=Pseudomonas aeruginosa GN=merA PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.107e-24
Identity = 70/190 (36.84%), Postives = 107/190 (56.32%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T V G   F     ++V   EGG  VV     ++ATG+   V  +PG+   E    +ST ALA + +P++L VIG+  + LE+   +ARLGS+VTV+
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK--ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVL 299          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: DLDH_MYCPN (Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoniae GN=pdhD PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.222e-24
Identity = 76/221 (34.39%), Postives = 119/221 (53.85%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVK--SLPGITIDEKR--IVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AA  A +  LKT  +EK    GG CLNVGCIP+K LL  + +     H+   +G+  +  V ++   ++ QK K VS L  G++ +    K   V G  + + P+ V V     G T    K+I++ATGS  +  +LPG     +   ++ ST AL+L  VP+KLVV+G G IG+E   ++A LGSEVT+++    I+   D E+     + L+ + +K +
Sbjct:   17 AAEYAGKHKLKTLVVEKE-YFGGVCLNVGCIPTKTLLKRAKIVDYLRHA-QDYGISINGQVALNWNQLLEQKGKVVSKLVGGVKAIIASAKAETVMGEAKVLDPNTVEV----AGKTYTT-KSIVVATGSRPRYLTLPGFAEARQNGFVIDSTQALSLEGVPRKLVVVGGGVIGIEFAFLYASLGSEVTILQGVDRILEIFDTEVSDLVAKLLQTKNVKII 230          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_ALCSP (Mercuric reductase OS=Alcaligenes sp. GN=merA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.599e-23
Identity = 66/190 (34.74%), Postives = 105/190 (55.26%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G   T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T + G   F     ++V   +GG  VV     ++ATG+   V  +PG+   E    +ST AL  + +P++L VIG+  + LE+   +ARLGS+VT++
Sbjct:  111 AALKAVEQGANVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDDNPAITVLHGEARFKDDQSLAVRLNDGGERVVAFDRCLVATGASPAVPPIPGLK--ESPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSKVTIL 297          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_SHIFL (Mercuric reductase OS=Shigella flexneri GN=merA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.088e-23
Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  ++  +   A++AQ+   V  L     EG+ + N  +T + G   F     + V   +GG  VV     +IATG+   V  +PG+   +    +ST AL    +PK+L VIG+  + LE+   +ARLG++VT++
Sbjct:  112 AALKAVEQGARVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATTPTIQRTALLAQQQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNLIVQLNDGGERVVAFDRCLIATGASPAVPPIPGLK--DTPYWTSTEALVSETIPKRLAVIGSSVVALELAQAFARLGAKVTIL 298          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_STRLI (Mercuric reductase OS=Streptomyces lividans GN=merA PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.935e-23
Identity = 67/187 (35.83%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGIT-IDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTV 759
            AAI A   G     +E RG  GGTC+NVGC+PSKALL ++   H A  +    G++ +   +D PA+++ KD  V  L       L  +     V G   F     + V   +GG   V+  + +IATGS   + P I  +D+   ++ST A+ L ++P+ L+++G GY+GLE   ++ARLGS VT+
Sbjct:   22 AAIAARNKGRSVVMVE-RGTTGGTCVNVGCVPSKALLAAAEARHGAQAASRFPGIQATEPALDFPALISGKDTLVGQLRAEKYTDLAAEYGWQIVHGTATFADGPMLEVALNDGGTATVEAAHYLIATGS-APTAPHIDGLDQVDYLTSTTAMELQQLPEHLLILGGGYVGLEQAQLFARLGSRVTL 206          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_SERMA (Mercuric reductase (Fragments) OS=Serratia marcescens GN=merA PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.935e-23
Identity = 65/188 (34.57%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNKVTYVK-GYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +    ++AQ+   V  L     EG+   N    V+ G   F    ++SV   EGG  VV     ++ATG+     P   + E    +ST AL  + +P++L VIG+  + LE+   +ARLGS+VT++
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGMPPTPPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVRHGEARFKDDRDLSVSLNEGGERVVMFDRCLVATGASPAMPPIPGLKESPYWTSTEALVSDTIPERLAVIGSSVVALELAQAFARLGSQVTIL 299          
The following BLAST results are available for this feature:
BLAST of FC917665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
STHA_MYCBP2.231e-2534.65Soluble pyridine nucleotide transhydrogenase OS=My... [more]
STHA_MYCBO2.231e-2534.65Probable soluble pyridine nucleotide transhydrogen... [more]
MERA_STAES1.107e-2434.25Mercuric reductase OS=Staphylococcus epidermidis (... [more]
MERA_STAAU1.107e-2434.25Mercuric reductase OS=Staphylococcus aureus GN=mer... [more]
MERA_PSEAE1.107e-2436.84Mercuric reductase OS=Pseudomonas aeruginosa GN=me... [more]
DLDH_MYCPN3.222e-2434.39Dihydrolipoyl dehydrogenase OS=Mycoplasma pneumoni... [more]
MERA_ALCSP1.599e-2334.74Mercuric reductase OS=Alcaligenes sp. GN=merA PE=3... [more]
MERA_SHIFL2.088e-2334.74Mercuric reductase OS=Shigella flexneri GN=merA PE... [more]
MERA_STRLI7.935e-2335.83Mercuric reductase OS=Streptomyces lividans GN=mer... [more]
MERA_SERMA7.935e-2334.57Mercuric reductase (Fragments) OS=Serratia marcesc... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA21AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA21AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917665 ID=FC917665; Name=FC917665; organism=Citrus clementina; type=EST; length=861bp
AATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGCAAGTCT
TGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGA
ATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCG
GCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTA
CGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCG
AGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCC
TCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTC
TTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTG
CTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATT
GAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCGA
GTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACA
CTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAG
TCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGG
AGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTGGGGCAG
GCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTTGGTTCAGAG
GTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCATGGATGGGGA
AATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGATGAAATTCA
TGCTCAAAACT
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