FC917665

Overview
NameFC917665
Unique NameFC917665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length861
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_ENTAG (Mercuric reductase OS=Enterobacter agglomerans GN=merA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.036e-22
Identity = 68/190 (35.79%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G + T IE RG +GGTC+NVGC+PSK ++  +H+ H    S    G+  +S  +    ++AQ+   V  L     EG+   N  +T + G   F     + V   EGG  VV     ++ATG+   V  +PG+   E    +ST ALA + +P++L VIG+  + LE+   +ARLGS+VT +
Sbjct:  113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRVAHIAHLRRESPFDGGMPPTSPTILRERLLAQQQARVEELRHAKYEGILDGNSAITVLHGEARFKDDQSLIVSLNEGGERVVMFDRCLVATGASPAVPPIPGLK--ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTAL 299          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_ACICA (Mercuric reductase OS=Acinetobacter calcoaceticus GN=merA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.036e-22
Identity = 66/190 (34.74%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G   + IE RG +GGTC+NVGC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T V G   F     + V   +GG  VV     ++ATG+   V  +PG+   E    +ST AL  + +P++L VIG+  + LE+   +ARLGS+VT++
Sbjct:  113 AALKAVEQGAHVSLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVEELRHAKYEGILDGNPAITVVHGEARFKDEQSLVVRLNDGGERVVAFDRCLVATGASPAVPPIPGLK--ESPYWTSTEALVSDTLPERLAVIGSSVVALELAQAFARLGSQVTIL 299          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_PSEFL (Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.309e-22
Identity = 65/190 (34.21%), Postives = 102/190 (53.68%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            AA+KA + G   T IE RG +GGTC+N+GC+PSK ++ ++H+ H    S    G+  +   +D   ++AQ+   V  L     EG+   N  +T + G   F     + V   EGG   V     ++ATG+   V  +PG+   E    +ST AL  + +P +L VIG+  + LE+   +ARLGS+VT++
Sbjct:  100 AALKAVEQGATVTLIE-RGTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQSLVVRLNEGGEREVTFDRCLVATGASPAVPPIPGLK--ESPYWTSTEALVSDTIPARLAVIGSSVVALELAQAFARLGSQVTIL 286          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: MERA_THIFE (Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21
Identity = 61/189 (32.28%), Postives = 101/189 (53.44%), Query Frame = 1
Query:  208 AIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKNK-VTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVV 762
            A+KA + G + T IE R  +GGTC+N+GC+PSK ++ ++H+ H    S    G++  +  +   A++ Q+   V  L     EG+   N  +T ++G   F     V V   +GG  VV     ++ATG+   V  +PG+   +    +ST  L    +P++L VIG+  + LE+   +ARLGS VT++
Sbjct:  100 ALKAVERGARVTLIE-RSTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIQAVAPTIQRTALLVQQQARVDELRHAKYEGILDGNPAITVLRGEARFKDSRSVVVHLNDGGERVVMFDRCLVATGASPAVPPIPGLK--DTPYWTSTEGLVSESIPERLAVIGSSVVALELAQAFARLGSHVTIL 285          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: YKGC_ECOLI (Probable pyridine nucleotide-disulfide oxidoreductase ykgC OS=Escherichia coli (strain K12) GN=ykgC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21
Identity = 69/220 (31.36%), Postives = 109/220 (49.55%), Query Frame = 1
Query:  208 AIKAAQLGLKTTCIEKRGAL-GGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNL-TRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFML 855
            A+  A+ G +   IE+  A+ GGTC+N+GCIP+K L+H +  +                   D    + +K++ V+ L  +    L     +  + G  EFI+   + V   EG N  + G+ I I TG+   V  +PGIT     +  STG L L E+P  L ++G GYIG+E  S++A  GS+VT++E A+  +P  D +I       L  Q +  +L
Sbjct:   19 AVTLAKAGWRVALIEQSNAMYGGTCINIGCIPTKTLVHDAQQH------------------TDFVRAIQRKNEVVNFLRNKNFHNLADMPNIDVIDGQAEFINNHSLRVHRPEG-NLEIHGEKIFINTGAQTVVPPIPGITTTPG-VYDSTGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIIL 218          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR1_HUMAN (Thioredoxin reductase 1, cytoplasmic OS=Homo sapiens GN=TXNRD1 PE=1 SV=3)

HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21
Identity = 67/225 (29.78%), Postives = 112/225 (49.78%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AA +AAQ G K   ++         R  LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M+      + +L  G     ++ KV Y   YG+FI P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA Y+ LE     A +G +VTV+   + ++   D ++  +    +E+  +KF+
Sbjct:  177 AAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFI 398          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR1_PONAB (Thioredoxin reductase 1, cytoplasmic OS=Pongo abelii GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21
Identity = 66/225 (29.33%), Postives = 112/225 (49.78%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIE--------KRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            AA +AAQ G K   ++         R  LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M+      + +L  G     ++ KV Y   YG+FI P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +++GA Y+ LE     A +G +VTV+   + ++   D ++  +    +E+  +KF+
Sbjct:   27 AAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLIVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFI 248          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR1_RAT (Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus GN=Txnrd1 PE=1 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 2.161e-20
Identity = 62/205 (30.24%), Postives = 104/205 (50.73%), Query Frame = 1
Query:  241 TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            T +   G LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M       + +L  G     ++ KV Y   YG+FI P ++     +G   V   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA Y+ LE     A +G +VTV+   + ++   D ++  +    +E+  +KF+
Sbjct:   47 TPLGTNGGLGGTCVNVGCIPKK-LMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYENAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFI 248          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: GSHR_SCHPO (Glutathione reductase OS=Schizosaccharomyces pombe GN=pgr1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = 1
Query:  205 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSV-EVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEG-GNTVVKGKNIIIATGSD---VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSE 750
            +A +AA+ G K   IE  G LGGTC+N GC+P K + + + +  + M +   +G   S +   D   +  ++D  +  L    E    K+ V Y+ G+  F+SP+EV+VD  +G G  V   K I+IA G        +PG        + S G   L   PK++ ++GAGYI +E+  V+A LG+E
Sbjct:   22 SARRAAKHGAKVALIEASGRLGGTCVNYGCVPKKIMWNIADLVAK-MKTAKQNGFPNSQLGSFDWGMIKRKRDAYIGRLNGIYERNVNKDGVAYISGHASFVSPTEVAVDMNDGSGTQVFSAKYILIAVGGHPIWPSHIPGAEYG----IDSDGFFELESQPKRVAIVGAGYIAVELAGVFAALGTE 203          
BLAST of FC917665 vs. ExPASy Swiss-Prot
Match: TRXR1_BOVIN (Thioredoxin reductase 1, cytoplasmic OS=Bos taurus GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 8.212e-20
Identity = 60/205 (29.27%), Postives = 103/205 (50.24%), Query Frame = 1
Query:  241 TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM 852
            T +  R  LGGTC+NVGCIP K L+H + +  +A+    ++G     +V+ D   M       + +L  G     ++ KVTY   YGEF+ P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA Y+ LE     A +G +VTV+   + ++   D ++  +    +++  +KF+
Sbjct:   47 TPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMQEHGIKFI 248          
The following BLAST results are available for this feature:
BLAST of FC917665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
MERA_ENTAG1.036e-2235.79Mercuric reductase OS=Enterobacter agglomerans GN=... [more]
MERA_ACICA1.036e-2234.74Mercuric reductase OS=Acinetobacter calcoaceticus ... [more]
MERA_PSEFL2.309e-2234.21Mercuric reductase OS=Pseudomonas fluorescens GN=m... [more]
MERA_THIFE2.553e-2132.28Mercuric reductase OS=Thiobacillus ferrooxidans GN... [more]
YKGC_ECOLI4.354e-2131.36Probable pyridine nucleotide-disulfide oxidoreduct... [more]
TRXR1_HUMAN4.354e-2129.78Thioredoxin reductase 1, cytoplasmic OS=Homo sapie... [more]
TRXR1_PONAB5.687e-2129.33Thioredoxin reductase 1, cytoplasmic OS=Pongo abel... [more]
TRXR1_RAT2.161e-2030.24Thioredoxin reductase 1, cytoplasmic OS=Rattus nor... [more]
GSHR_SCHPO6.287e-2033.16Glutathione reductase OS=Schizosaccharomyces pombe... [more]
TRXR1_BOVIN8.212e-2029.27Thioredoxin reductase 1, cytoplasmic OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA21AH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA21AH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917665 ID=FC917665; Name=FC917665; organism=Citrus clementina; type=EST; length=861bp
AATCGATTGATTGGAGAAAAAGTTGATTGAAAAATGGTGATGGCAAGTCT
TGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCTCGAACTCGTCGA
ATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGGGGCTTCGCTTCG
GCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGGACCTGGTGGTTA
CGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGACCACGTGCATCG
AGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTCGGATGCATCCCC
TCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGAAGCCATGCATTC
TTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAGTTGATTTGCCTG
CTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTTACAAGAGGTATT
GAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAAAGGATATGGCGA
GTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTGAAGGTGGAAACA
CTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGTTCTGACGTTAAG
TCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGTGTCATCCACTGG
AGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCATTGGGGCAG
GCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTTGGTTCAGAG
GTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCATGGATGGGGA
AATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGATGAAATTCA
TGCTCAAAACT
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