FC917911

Overview
NameFC917911
Unique NameFC917911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length844
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A8_HUMAN (Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC9A8 PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 62/194 (31.96%), Postives = 107/194 (55.15%), Query Frame = 1
Query:  259 QMVNTSDHNSVVSINIFVALLCASIVIGHLLEESR--WMNESITALLIGVCAGVIILLTTGGKSSHLF---VFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKLD-IGTLDIGDYLAIGAIFAATDSVCTLQVLNQ-DDTPLLYSLVFGEGVVNDATSVVLFNAIQ 819
            +     + +S ++I   + +L   I++ HLL   R  ++ ES+  + +G+  G +I +    K ++     +F  ++FF+ +LPPIIF +G+ + K  FF+N  +I LF   GT +S  ++  G I F  + D I  L++ D  A G++ +A D V T+ + N     P+L  LVFGE ++NDA S+VL N  +
Sbjct:   49 EQAQQEEQSSGMTIFFSLLVLAICIILVHLLIRYRLHFLPESVAVVSLGILMGAVIKIIEFKKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFAVFGTAISAFVVG-GGIYFLGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIVLTNTAE 241          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A8_CHICK (Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 63/188 (33.51%), Postives = 107/188 (56.91%), Query Frame = 1
Query:  277 DHNSVVSINIFVALLCASIVIGHLLEESR--WMNESITALLIGVCAGVIILLTTGGKSSHLF---VFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKLD-IGTLDIGDYLAIGAIFAATDSVCTLQVLNQ-DDTPLLYSLVFGEGVVNDATSVVLFNAIQ 819
            + +S ++I   + +L   I++ HLL + R  ++ ES+  + +G+  G  I +    K ++     +F  ++FF+ +LPPIIF +G+ + K  FF+N  +I LF   GT +S  I+  G I F  + D I  L++ D  A G++ +A D V T+ + N  +  P+L  LVFGE ++NDA S+VL N  +
Sbjct:   48 EQSSGMTIFFSLLVLAICIILVHLLIKYRLHFLPESVAVVSLGIIMGAFIKIIEAQKLANWKEEEMFRPNMFFLLLLPPIIFESGYSLHKGNFFQNIGSITLFSVFGTAISAFIVG-GGIYFLGQADVIYKLNMTDSFAFGSLISAVDPVATIAIFNALNVDPVLNMLVFGESILNDAVSIVLTNTAE 234          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: YDO6_SCHPO (Uncharacterized Na(+)/H(+) antiporter C15A10.06 OS=Schizosaccharomyces pombe GN=SPAC15A10.06 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 55/180 (30.56%), Postives = 104/180 (57.78%), Query Frame = 1
Query:  304 IFVALLCASIVIGHLLEES--RWMNESITALLIGVCAGVIILLTTGGKSSHLFVFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQF---FKKLDIGTLDIGDYLAIGAIFAATDSVCTLQVLNQDDT-PLLYSLVFGEGVVNDATSVVLFNAIQSF 825
            I + LL  +++  + ++    R ++E++ ++ +G+  G+II ++ G    ++  F    FF  +LPPII N+G+++ +  FFRN  TI+ F   GT +S   ++LGV+ +   F   +  ++   + L++GA  +ATD V  L + N       LY+++FGE ++NDA ++V+F  +Q F
Sbjct:   39 ILLVLLIGALLTSYYVQSKKIRAIHETVISVFVGMVVGLIIRVSPGLIIQNMVSFHSTYFFNVLLPPIILNSGYELHQSNFFRNIGTILTFAFAGTFISA--VTLGVLVYIFSFLNFENLSMTFVEALSMGATLSATDPVTVLAIFNSYKVDQKLYTIIFGESILNDAVAIVMFETLQQF 216          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: NHX6_ARATH (Sodium/hydrogen exchanger 6 OS=Arabidopsis thaliana GN=NHX6 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 59/179 (32.96%), Postives = 100/179 (55.87%), Query Frame = 1
Query:  292 VSINIFVALLCASIVIGHLLEESR--WMNESITALLIGVCAGVIILLTTGGKSSHL-FVFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKLDIGTLDIGDYLAIGAIFAATDSVCTLQVLNQDDTPL-LYSLVFGEGVVNDATSVVLFNAI 816
            V I + + +L  S V+GH+L   +  ++ E+  +LLIG+  G +  ++    S    F F ++ FF+++LPPIIF +GF ++ K FF NF  I+ F  +GT V+  +  L V        +  L   + L  G++ +ATD V  L +  +  + + LY+LVFGE V+NDA ++ L+  +
Sbjct:   26 VGILLQIMMLVLSFVLGHVLRRHKFYYLPEASASLLIGLIVGGLANISNTETSIRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAIVTFSVLGTFVASMVTGLLVYLGGVMFLMYRLPFVECLMFGSLISATDPVTVLSIFQELGSDVNLYALVFGESVLNDAMAISLYRTM 204          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A3_RABIT (Sodium/hydrogen exchanger 3 OS=Oryctolagus cuniculus GN=SLC9A3 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 66/211 (31.28%), Postives = 111/211 (52.61%), Query Frame = 1
Query:  211 WLQKMDQAIISVVRKLQMVNTSDHNSVVSINIFVALLCASI--VIGHLLEE-SRWMNESITALLIGVCAGVIILLTTGGKSSHLFVFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKLDIGTLDIG--DYLAIGAIFAATDSVCTLQVLNQ-DDTPLLYSLVFGEGVVNDATSVVLFNAIQSF 825
            W Q  +Q     ++  Q+V    H+      I + +L AS+  ++ HL  + +  + ES   +++G+  G I+L      S   F  +  +FF Y+LPPI+ +AG+ +  + FF N  +I+L+  +GT+ +     L +   F    +G L IG  D+L  G++ AA D V  L V  +     +L+ +VFGE ++NDA +VVL+N  QSF
Sbjct:   26 WTQGAEQEHHDEIQGFQIVTFKWHHVQDPYIIALWVLVASLAKIVFHLSHKVTSVVPESALLIVLGLVLGGIVLAADHIAS---FTLTPTVFFFYLLPPIVLDAGYFMPNRLFFSNLGSILLYAVVGTVWNAATTGLSLYGVFLSGIMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFQSF 233          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A6_HUMAN (Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC9A6 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 68/225 (30.22%), Postives = 118/225 (52.44%), Query Frame = 1
Query:  223 MDQAIISVVRKLQMVNTSDHNSVVSINIFVALLCASIVIGHLLEE--SRWMNESITALLIGVCAGVI-------------ILLTTGGKSSH---LFVFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIIS---LGVIQFFKKLD--IGTLDIGDYLAIGAIFAATDSVCTLQVLNQDDTPL-LYSLVFGEGVVNDATSVVLFNAIQSF 825
            MD+ I+S     +    S      ++ IF+ LL  +I+   L +   +R+++E+  A++ G+  G++             + L+   +SS    L  F  ++FF  +LPPIIF AG+ +K++ FFRN  +I+ +  +GT +SC +I     G +   K      G     D L  GAI +ATD V  L + ++    + LY+L+FGE V+NDA ++VL ++I ++
Sbjct:   53 MDEEIVSE----KQAEESHRQDSANLLIFILLLTLTILTIWLFKHRRARFLHETGLAMIYGLLVGLVLRYGIHVPSDVNNVTLSCEVQSSPTTLLVTFDPEVFFNILLPPIIFYAGYSLKRRHFFRNLGSILAYAFLGTAISCFVIGSIMYGCVTLMKVTGQLAGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLFGESVLNDAVAIVLSSSIVAY 273          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A3_RAT (Sodium/hydrogen exchanger 3 OS=Rattus norvegicus GN=Slc9a3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 62/182 (34.07%), Postives = 99/182 (54.40%), Query Frame = 1
Query:  289 VVSINIFVALLCASIVIGHLLEESRWMNESITALLIGVCAGVIILLTTGGKSSHLFVFSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKLDIGTLDIG--DYLAIGAIFAATDSVCTLQVLNQ-DDTPLLYSLVFGEGVVNDATSVVLFNAIQSF 825
            ++++ I VA L A IV     + +  + ES   +++G+  G I+       S   F  +  LFF Y+LPPI+ +AG+ +  + FF N  TI+L+  IGT+ +     L +   F    +G L IG  D+L  G++ AA D V  L V  +     +L+ +VFGE ++NDA +VVL+N  +SF
Sbjct:   54 IIALWILVASL-AKIVFHLSHKVTSVVPESALLIVLGLVLGGIVWAADHIAS---FTLTPTLFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTIWNAATTGLSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESF 231          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A7_MOUSE (Sodium/hydrogen exchanger 7 OS=Mus musculus GN=Slc9a7 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  460 FSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIIS---LGVIQFFKKLDIGTLD----IGDYLAIGAIFAATDSVCTLQVLNQDDTPL-LYSLVFGEGVVNDATSVVLFNAIQSFDLTHIN 843
            F  ++FF  +LPPIIF+AG+ +KK+ FFRN  +I+ +  +GT VSC II     GV++  K   +G L       D L  GAI +ATD V  L + N+    + LY+L+FGE V+NDA ++VL ++I ++    +N
Sbjct:  178 FDPEVFFNILLPPIIFHAGYSLKKRHFFRNLGSILAYAFLGTAVSCFIIGNLMYGVVKLMK--IVGQLSDKFYYTDCLFFGAIISATDPVTVLAIFNELHADVDLYALLFGESVLNDAVAIVLSSSIVAYQPAGLN 311          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A7_HUMAN (Sodium/hydrogen exchanger 7 OS=Homo sapiens GN=SLC9A7 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  460 FSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIIS---LGVIQFFKKLDIGTLD----IGDYLAIGAIFAATDSVCTLQVLNQDDTPL-LYSLVFGEGVVNDATSVVLFNAIQSFDLTHIN 843
            F  ++FF  +LPPIIF+AG+ +KK+ FFRN  +I+ +  +GT VSC II     GV++  K +  G L       D L  GAI +ATD V  L + N+    + LY+L+FGE V+NDA ++VL ++I ++    +N
Sbjct:  178 FDPEVFFNILLPPIIFHAGYSLKKRHFFRNLGSILAYAFLGTAVSCFIIGNLMYGVVKLMKIM--GQLSDKFYYTDCLFFGAIISATDPVTVLAIFNELHADVDLYALLFGESVLNDAVAIVLSSSIVAYQPAGLN 311          
BLAST of FC917911 vs. ExPASy Swiss-Prot
Match: SL9A9_MOUSE (Sodium/hydrogen exchanger 9 OS=Mus musculus GN=Slc9a9 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 50/129 (38.76%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  460 FSEDLFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGAIGTLVSCTIISLGVIQFFKKL-DIGTLDIGDY-----LAIGAIFAATDSVCTLQVLNQ-DDTPLLYSLVFGEGVVNDATSVVLFNAIQSF 825
            F  ++FF  +LPPIIF+AG+ +KK+ FF+N  +I+ +  +GT +SC +I L +  F K +   G L  GD+     L  G++ +ATD V  L + ++    P LY+L+FGE V+NDA ++VL  +I  +
Sbjct:  129 FDPEIFFNVLLPPIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCVVIGLIMYGFVKAMVHAGQLKSGDFHFTDCLFFGSLMSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISIY 257          
The following BLAST results are available for this feature:
BLAST of FC917911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
SL9A8_HUMAN1.222e-2031.96Sodium/hydrogen exchanger 8 OS=Homo sapiens GN=SLC... [more]
SL9A8_CHICK1.222e-2033.51Sodium/hydrogen exchanger 8 OS=Gallus gallus PE=2 ... [more]
YDO6_SCHPO1.597e-2030.56Uncharacterized Na(+)/H(+) antiporter C15A10.06 OS... [more]
NHX6_ARATH7.923e-2032.96Sodium/hydrogen exchanger 6 OS=Arabidopsis thalian... [more]
SL9A3_RABIT1.035e-1931.28Sodium/hydrogen exchanger 3 OS=Oryctolagus cunicul... [more]
SL9A6_HUMAN5.136e-1930.22Sodium/hydrogen exchanger 6 OS=Homo sapiens GN=SLC... [more]
SL9A3_RAT1.494e-1834.07Sodium/hydrogen exchanger 3 OS=Rattus norvegicus G... [more]
SL9A7_MOUSE1.952e-1840.44Sodium/hydrogen exchanger 7 OS=Mus musculus GN=Slc... [more]
SL9A7_HUMAN2.549e-1840.44Sodium/hydrogen exchanger 7 OS=Homo sapiens GN=SLC... [more]
SL9A9_MOUSE4.348e-1838.76Sodium/hydrogen exchanger 9 OS=Mus musculus GN=Slc... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA44BC07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA44BC07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917911 ID=FC917911; Name=FC917911; organism=Citrus clementina; type=EST; length=844bp
CTGAATTTATTTTGTCATAATTTCTGCTCTCTCTCTCTCTCCCGCTGACT
CTCCGTTTCTGGGTTTCAATAATTTGGATTCTTTTTTTACGGCAAATGAG
AAGCGTTACGGTTTGTGAACTGACTGGCTTGTTTGGAGAAAATCAGAGTT
TTAGAGTTGTGAAGAAGAAGTAAAATTAATCTGTATTGAGCAATTGATTG
ATAAAAGCTGTGGTTGCAAAAAATGGATCAAGCAATAATTTCTGTTGTAA
GGAAATTGCAAATGGTGAACACGTCTGATCACAACTCGGTGGTTTCCATA
AACATTTTTGTGGCGCTTCTTTGTGCTTCTATTGTGATTGGTCACCTTCT
TGAAGAAAGCCGGTGGATGAACGAGTCCATTACAGCTCTACTGATTGGAG
TTTGTGCAGGTGTGATTATTTTGCTGACAACTGGGGGAAAAAGCTCACAT
CTGTTTGTGTTCAGTGAAGATCTGTTCTTTATATATGTGTTGCCCCCCAT
TATATTTAATGCAGGATTTCAGGTGAAAAAGAAACAATTTTTCCGCAACT
TCATTACTATCATGCTGTTTGGTGCAATTGGGACATTAGTAAGCTGTACC
ATCATATCACTAGGTGTTATTCAGTTCTTTAAGAAATTGGATATTGGTAC
TCTGGATATAGGAGATTATCTAGCAATTGGTGCCATATTTGCTGCAACAG
ATTCCGTTTGCACGTTGCAGGTGCTTAATCAGGATGACACACCTTTGCTC
TACAGTCTGGTATTTGGGGAGGGTGTTGTTAATGATGCTACATCTGTGGT
TCTTTTCAATGCAATCCAGAGCTTTGACCTCACTCATATAAATA
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