FC917914

Overview
NameFC917914
Unique NameFC917914
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6V1_DROME (Probable cytochrome P450 6v1 OS=Drosophila melanogaster GN=Cyp6v1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLREC--VKKYTF----PGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKH--SYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVE 389
            + +L Y+AV  +++L+   +E +R +P +  L REC  + K  F    P  +     G+ V I   AI  DP+Y+P+PD+F PERF   AA   L+   SY+PFG GPR CIG ++GL+Q   G+   L  + VE
Sbjct:  357 NGRLTYEAVARMEFLDMVVEETLRKYPIVPLLERECTPINKKRFYSLRPHAECYTRRGMPVFISNLAIHHDPKYWPDPDRFDPERF--SAANKALQAPMSYMPFGAGPRNCIGMQIGLLQIKLGLVYFLHQHRVE 489          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP6A1_MUSDO (Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFP-SLGFLL-RECVKKYTFP-GTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQ 374
            ++ + YDA+  + YL+    E +R +P  +G  L R+ +  Y  P      + +G LV IPV  I  DP+ +P P++F PERF  +  K      +L FGDGPR CIG R G MQS  G+A +++
Sbjct:  344 EDNISYDALMNIPYLDQVLNETLRKYPVGVGSALTRQTLNDYVVPHNPKYVLPKGTLVFIPVLGIHYDPELYPNPEEFDPERFSPEMVKQRDSVDWLGFGDGPRNCIGMRFGKMQSRLGLALVIR 468          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP4V2_PONAB (Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 48/161 (29.81%), Postives = 86/161 (53.42%), Query Frame = 3
Query:    3 KYDNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKR 485
            K D     + +++L+YLE   KE +R+FPS+    R   +     G  V   +G    I  +A+  DP+YFP P++F+PERF  + A+    ++Y+PF  GPR CIG++  +M+    ++ +L+ + +E   S+++R        +      G+ +KL +R
Sbjct:  365 KSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVL--KGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHFWIE---SNQKREELGLEGQLILRPSNGIWIKLKRR 520          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP9C1_DROME (Cytochrome P450 9c1 OS=Drosophila melanogaster GN=Cyp9c1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.574e-16
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTD----VTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPS 395
            +  L YD +  +KYL     E +R +P    + R C   +     +    V + E  LV I V A+  DP  FPEP+QF+PERF  +   +I + +YLPFG G R+CIG RL LM+  + +  L+  Y ++P+
Sbjct:  358 EKPLDYDTLMGMKYLNCVVSESLRKWPPAFIVDRMCGSDFQLKDEEGEVVVNLREDDLVHINVGALHHDPDNFPEPEQFRPERFDEEHKHEIRQFTYLPFGVGQRSCIGNRLALMEVKSLIFQLVLRYHLKPT 490          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C13A4_CAEEL (Putative cytochrome P450 CYP13A4 OS=Caenorhabditis elegans GN=cyp-13A4 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 56/162 (34.57%), Postives = 83/162 (51.23%), Query Frame = 3
Query:    9 DNKLCYDAVRELKYLEAAFKEGMRMFPSLGFLL-RECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYF-PEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVKRH 488
            D ++ +D + +LKY+E   KE +RM+P    +  R+C+KK    G  V IDEG  V +    +  DP+ +  +  +FKPER+         K  YLPFG GPR CIG RL +M+    +  +L+ YT + S  ++        ATI       + LKL  RH
Sbjct:  362 DPEVTFDQISKLKYMECVVKEALRMYPLASLVHNRKCMKKTNVLG--VEIDEGTNVQVDTWTLHYDPKVWGDDASEFKPERWETGDELFYAKGGYLPFGMGPRICIGMRLAMMEEKLLLTHILKKYTFDTSTETEIPLKLVGSATIAPR---NVMLKLTPRH 518          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16
Identity = 45/155 (29.03%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   18 LCYDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGLPLKLVK 482
            + +D + ++ Y     KE +R++P +  + RE  K  TFP    ++  G+ +S+ ++ +  +PQ +P P++F P RF   +A+    H+++PF  G R CIG++  + +    VA  L  + + P  S  R+P++ P   +  N + G+ LKL K
Sbjct:  355 ITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGR-SLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAPGSARH--SHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFELAPDPS--RKPIATPEVVL--NSKNGIHLKLRK 502          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C4D14_DROME (Probable cytochrome P450 4d14 OS=Drosophila melanogaster GN=Cyp4d14 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   39 ELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPSASSKRRPVSDPRATITQNIQGGL 464
            ELKYLE   KE +R+FPS+  + R   +     G  +  D  V++ I  HA Q DP YFP+P++F P+RF  +   +I   +Y PF  GPR CIG++  +++  + ++ +++ + + P    + +PV +     T  I  GL
Sbjct:  364 ELKYLECVIKESLRLFPSVPIIGRYISQDTVLDGKLIPADSNVIILI-YHA-QRDPDYFPDPEKFIPDRFSMERKGEISPFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVRHFELLP-LGEEVQPVLNVILRSTTGINCGL 502          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 45/120 (37.50%), Postives = 64/120 (53.33%), Query Frame = 3
Query:   24 YDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYT 383
            Y  + E++YL+    E +R+FP    L R  V K       V I + ++V IP   +  DP+ +PEP+ FKPERF      +I  + Y+PFG GPR CIG R  L+     V  +LQ Y+
Sbjct:  346 YQPLMEMEYLDCVINESLRLFPIAARLER--VAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYS 463          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.179e-15
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 3
Query:   24 YDAVRELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYT 383
            Y  + E++YL+    E +R+FP    L R  V K       + I + ++V IP   +  DP+ +PEP+ FKPERF      +I  + Y+PFG GPR CIG R  L+     V  +LQ Y+
Sbjct:  346 YQPLMEMEYLDCVINESLRLFPIAARLER--VAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKDNIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYS 463          
BLAST of FC917914 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 39/119 (32.77%), Postives = 74/119 (62.18%), Query Frame = 3
Query:   39 ELKYLEAAFKEGMRMFPSLGFLLRECVKKYTFPGTDVTIDEGVLVSIPVHAIQTDPQYFPEPDQFKPERFLGDAAKDILKHSYLPFGDGPRACIGERLGLMQSLAGVAALLQLYTVEPS 395
            EL +LE   KE +R+FPS   + R C+++    G  + + +   +SI ++ I  D ++FP+P+QF PERFL + + +    +++PF  GPR CIG++ G+++    +AA+++ + + P+
Sbjct:  364 ELIHLECVIKESLRLFPSAPIIGRTCIEESVMNG--LVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFLPENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKLLPA 480          
The following BLAST results are available for this feature:
BLAST of FC917914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CP6V1_DROME1.971e-1638.52Probable cytochrome P450 6v1 OS=Drosophila melanog... [more]
CP6A1_MUSDO1.971e-1637.60Cytochrome P450 6A1 OS=Musca domestica GN=CYP6A1 P... [more]
CP4V2_PONAB1.971e-1629.81Cytochrome P450 4V2 OS=Pongo abelii GN=CYP4V2 PE=2... [more]
CP9C1_DROME2.574e-1636.09Cytochrome P450 9c1 OS=Drosophila melanogaster GN=... [more]
C13A4_CAEEL5.733e-1634.57Putative cytochrome P450 CYP13A4 OS=Caenorhabditis... [more]
CP4AO_PIG7.488e-1629.03Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
C4D14_DROME1.668e-1533.10Probable cytochrome P450 4d14 OS=Drosophila melano... [more]
C330_FUNHE1.668e-1537.50Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
C356_FUNHE2.179e-1536.67Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]
C4AC3_DROME2.845e-1532.77Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA22DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA22DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC917914 ID=FC917914; Name=FC917914; organism=Citrus clementina; type=EST; length=885bp
CGAAATACGACAACAAGCTCTGCTACGACGCCGTGCGAGAATTGAAGTAC
CTTGAAGCCGCCTTTAAGGAGGGTATGCGCATGTTCCCTTCGCTCGGGTT
CCTGCTGCGCGAATGCGTCAAGAAGTACACATTCCCGGGCACTGACGTCA
CGATCGACGAGGGCGTGCTGGTGTCCATCCCGGTGCACGCCATACAGACG
GACCCCCAGTACTTCCCTGAGCCGGACCAGTTCAAGCCGGAGCGGTTCCT
CGGGGACGCGGCTAAGGACATCCTGAAGCACTCCTACCTGCCCTTCGGAG
ATGGGCCGAGGGCTTGCATAGGTGAGCGGCTGGGCCTGATGCAGTCGCTG
GCGGGCGTGGCGGCGCTGCTGCAGCTGTACACGGTGGAGCCCTCCGCCAG
CAGCAAGAGGCGGCCGGTCAGTGACCCCAGGGCCACCATCACTCAGAACA
TCCAGGGCGGACTACCCTTGAAACTCGTCAAGAGGCATTGATCCAACGGA
TAGACTGGTGTCATACGAAATTTTTGGACTCAATCCTCGTAATCCATTCC
TACTACCTCCGGTTCTTATAATCAATTCATTTCTATTTTAAGTTTTACCG
ATTGATCATAAACTAGAAATCGCGCGCGGTTTCACCCGCATAGTTCACGT
TTCCGTGGGAATACCGGGACGAAATATAGCCTATAGCCTTCCTCGATAAA
TGGGCTGTGTAACGCTGTAAGATTTTTTCGAATCCGACCAGTAGTTCCTG
AGATTAGCGCGTTCAAACAAACAAACTCTTCAGCTTTATAATATTAGTAT
AGATATACATAGGTGTAGGTACACCTGTATTTTCAATTCCTAAATCTCTT
GGCAAATCAGAATTTACAAATCAATGACAAGCCGG
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