FC918009

Overview
NameFC918009
Unique NameFC918009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length892
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11
Identity = 49/183 (26.78%), Postives = 89/183 (48.63%), Query Frame = 1
Query:   67 TSKNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSGGGDDHPIPVSVNDHLQYAM-FCLLVLMCFGDKLDHDQI 612
            TS   KLPPGP T P+IG +  +V S L V   L+ L  K+GP++ +  G    I +    +A + +  +   F+DRP  + + + ++ +   I    +G  WR  R+  T E+L   R  +++  R+  +  L+ ++ + ++  GG    +  S+     Y+M F +     FG K  + Q+
Sbjct:   37 TSSTCKLPPGPRTLPLIGNIHQIVGS-LPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFV-LSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSI-----YSMTFGIAARAAFGKKSRYQQV 212          
BLAST of FC918009 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11
Identity = 39/143 (27.27%), Postives = 70/143 (48.95%), Query Frame = 1
Query:   73 KNNKLPPGPFTFPVIGALPWLVKSPLEVEQILRKLHAKFGPIVTIPSGHCPAIFIADRALAHKALVQNGAVFADRPPALPVLKTITKDQRNISTGFYGPTWRLFRRNLTSEILHPSRAGTYKRARKWVLEVLLDRLKSESTSG 501
            K   LPP P   P+IG L  L   P    + LR L  + GP++ +  GH P + ++   +A + L  +  +FA R P+    + I  D  +++   YG  WR  R+    E+L   R  +Y+  R+  + ++++R+    ++G
Sbjct:   27 KKPNLPPSPPNLPIIGNLHQLGNLP---HRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASR-PSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTG 165          
The following BLAST results are available for this feature:
BLAST of FC918009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
C71DA_SOYBN4.324e-1126.78Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71A1_PERAE7.375e-1127.27Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA35BA04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA35BA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918009 ID=FC918009; Name=FC918009; organism=Citrus clementina; type=EST; length=892bp
TTCATCATCCTCATCTCAATCTTCATTGCTGCCCTCCTCAAAGCTTTCAT
CATCAACCTTCTCTTCACGAGCAAAAATAATAAGCTTCCCCCAGGCCCCT
TTACTTTCCCCGTTATTGGCGCTCTCCCGTGGCTTGTGAAATCTCCCTTA
GAGGTAGAACAAATCCTCAGAAAGCTTCATGCCAAGTTTGGCCCCATCGT
CACTATCCCTTCCGGCCATTGCCCCGCTATCTTCATCGCCGATCGCGCAC
TTGCCCACAAGGCCTTAGTCCAGAACGGCGCTGTCTTTGCTGACCGACCG
CCAGCTCTCCCAGTCCTCAAAACCATTACCAAAGACCAGCGGAACATCTC
TACAGGTTTTTACGGCCCCACGTGGCGGCTCTTCCGCCGGAATCTCACTT
CAGAAATCCTCCACCCTTCGCGTGCGGGAACCTACAAGCGCGCCCGCAAA
TGGGTTCTGGAAGTTCTCTTGGACCGCCTCAAGTCAGAGTCCACGAGCGG
CGGCGGTGATGATCATCCGATTCCGGTTAGCGTTAATGATCATCTTCAGT
ATGCTATGTTCTGCTTGTTAGTGCTCATGTGTTTCGGCGACAAGCTCGAC
CACGACCAAATCAAATTAATTGAGAATGTTCAGCGTCGTAGGTTGCAGGC
TTTCGCCAGATTCAGATTATTAGACTTCTGTCCAACGTTAACAAAAAATT
TTCTTCGTAAGAAGTGGGAGGAATTATTTCGGTCCCTTAAAGATCAAGAG
AACACACTGTTTCCTTTGATAAGAGCAAGAAAGAAGGCCAGGGAAGAGTG
GTTATCAAAGAAAGCTAATCATCAACATCATGCGGATGTGGAGGAGTATG
TGCTGTCTTATGTCGATACCCTGTTCGATTTGCGGCTTCCGG
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