FC918074

Overview
NameFC918074
Unique NameFC918074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12
Identity = 42/118 (35.59%), Postives = 58/118 (49.15%), Query Frame = -3
Query:  317 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEW 670
            YLKA + E LR HPPG  +LPH  T D   D  Y IP +  V      +G D  VWE    F PERF+ D     +   G++ + +PF            GL  +E  + NL+++F+W
Sbjct:  382 YLKASMKEALRLHPPGPLLLPHYSTADCQIDG-YHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDW 498          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12
Identity = 47/142 (33.10%), Postives = 68/142 (47.89%), Query Frame = -3
Query:  245 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPL 670
            YL A+I E LR +PP  F  P   TED      Y I K   +   + ++  D  VW D + FKPERFL+ H +D D+  G+  +++PF            GL  + Y + N + +FE      + +D+TE  EF      PL
Sbjct:  390 YLHAIIKETLRLYPPAPFSSPREFTEDCTIGG-YHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTH-KDVDVR-GQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPL 528          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 43/143 (30.07%), Postives = 70/143 (48.95%), Query Frame = -3
Query:  242 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPLP 670
            Y +A+  E  R+HP     LP   TE    D  + IPK+  +   +  +G D KVWE+ + F PERFL++     D   G   +++PF            G   +EY +G LV +F+W   DG  V++  ++ F + ++  +P
Sbjct:  368 YFQAICKETFRKHPSTPLNLPRISTEACEVDG-FHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKID-PRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDG-VVEVNMEESFGIALQKKVP 507          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11
Identity = 44/151 (29.14%), Postives = 72/151 (47.68%), Query Frame = -3
Query:  227 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDG---DEVDLTEKQEFTVVMKNPLPGFFFP 670
            YL+ V+ E  R HPP   +LPH    D      Y IPK  +V+  V  +  D  VW++   F+PERFL   ++D D+  G + +++PF            G+  +   + +L+ +F WT   G   +E+D++E       M+ P+     P
Sbjct:  349 YLQCVVKESFRLHPPTPLMLPHRSNADVKIGG-YDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFL---EEDVDMK-GHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAVATP 494          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11
Identity = 45/145 (31.03%), Postives = 68/145 (46.90%), Query Frame = -3
Query:  245 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDG---DEVDLTEKQEFTVVMKNPL 670
            YLK VI E  R HPP  F++P  V  +F  +D YVIP    +   V  +G D   W+D   F PERF+N          G+  +++PF            G   +E+ + N++++F+W    G   +++DL E        KN L
Sbjct:  351 YLKMVINETWRLHPPSPFLIPRQVMSEFELND-YVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSID----AKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNEL 490          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11
Identity = 45/145 (31.03%), Postives = 72/145 (49.66%), Query Frame = -3
Query:  245 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEW---TAVDGDEVDLTEKQEFTVVMKNPL 670
            YL+AV+ E  R HP    ++P     D V    +++PKD  V   V  +G D  VWE+S  FKPERFL    +D D+  GR+ ++ PF             +  +   + +L+++F+W     V  +++D+ E    T+   NPL
Sbjct:  362 YLQAVVKETFRLHPAAPLLVPRKAESD-VEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLG---KDIDLR-GRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPL 501          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11
Identity = 46/145 (31.72%), Postives = 66/145 (45.52%), Query Frame = -3
Query:  245 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEW---TAVDGDEVDLTEKQEFTVVMKNPL 670
            YL  ++ E LR HPP   +LP  V         Y IP    V      +G D  VW+DS+ FKP+RFL   +   D+  G +  ++PF                +   +G+L+ NF+W   T V  D +D+TEK   T+    PL
Sbjct:  343 YLSCIVKEVLRLHPPSPLLLPRKVVTQVELSG-YTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFL---ESRLDVR-GHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPL 482          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11
Identity = 46/150 (30.67%), Postives = 69/150 (46.00%), Query Frame = -3
Query:  227 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVW-EDSMGFKPERFLNDHDQDFDITGGR-EIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDGDEVDLTEKQEFTVVMKNPLPGFFFP 670
            YL  V+ E LR +P     LPH   E       Y IPK   V   +  +G D  VW  D+  FKPERF+   +   D++GG+ + +M+PF             +L +E+ +  L+  F+W  V+GD  +L  K+     M    P   +P
Sbjct:  370 YLHCVVKETLRLYPSLPLALPHESLEAVTVGG-YYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDW-RVEGDPSELDMKEACATKMPRQTPLLAYP 517          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 42/139 (30.22%), Postives = 65/139 (46.76%), Query Frame = -3
Query:  254 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDGDEVDLTEKQEFTVVMK 670
            YLKA I E LR HPP  F+LPH  T D   D  Y +P    V      +G D   WE    F PERF+ +         G++++ +PF            G   +E  + NL+++F+W  V G    ++ ++ F + ++
Sbjct:  387 YLKATIKETLRLHPPAPFLLPHYSTADSEIDG-YFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDW-EVPGSGAGVSMEESFGLTLR 523          
BLAST of FC918074 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 47/152 (30.92%), Postives = 67/152 (44.08%), Query Frame = -3
Query:  218 YLKAVILEGLRRHPPGHFVLPHAVTEDFVFDDKYVIPKDGSVNFMVAEMGWDSKVWEDSMGFKPERFLNDHDQDFDITGGREIKMMPFXXXXXXXXXXXXGLLHLEYFVGNLVWNFEWTAVDGDEVD-LTEKQEFTVVMKNPLPGFFFP*NR 670
            YL+A + E LR HPP   +LP    E     + Y IPKD  +      +G D K W D + F PERFLN    DF    G +  ++PF                +   V   V N +W   +G  VD L  +++F + ++   P F  P +R
Sbjct:  340 YLEATVKETLRLHPPTPLLLPRRALETCTILN-YTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNS-SVDF---RGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVPKSR 486          
The following BLAST results are available for this feature:
BLAST of FC918074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
C71C3_MAIZE7.003e-1235.59Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C82A1_PEA9.146e-1233.10Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C75A6_CAMME1.195e-1130.07Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C98A3_ARATH1.560e-1129.14Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71BX_ARATH1.560e-1131.03Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C76C2_ARATH2.661e-1131.03Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.661e-1131.727-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C75A1_PINTA2.661e-1130.67Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71C2_MAIZE3.475e-1130.22Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C80B1_ESCCA4.539e-1130.92(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA64AD01FM1 IVIA1 Citrus clementina cDNA clone IC0AAA64AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918074 ID=FC918074; Name=FC918074; organism=Citrus clementina; type=EST; length=672bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCCTAATT
TGATTTGGCCAAGGCCTACCAACCATTAAATTTCCATAGGAAATGACAAA
ATTACCACAAACAAAACGATGGTACATATAATTATGCCAATATTAAAAAA
AAAGTCTTACTTAATTTTTAAATGCAAAAAAAAACAAAAAAAAAAAATCA
GGGGAGTTATGTTCTTATCTATTTCAAGGAAAAAAAAAACCCGGCAAGGG
ATTCTTCATCACAACGGTAAACTCTTGCTTCTCAGTCAAATCAACCTCAT
CACCATCCACAGCCGTCCACTCAAAATTCCAAACCAAATTACCCACAAAA
TACTCCAAATGAAGCAAACCCAAACCAAAACCGGGACAAATTCCCCTGCC
ACCTCCAAAGGGCATCATCTTAATTTCCCTACCCCCCGTTATGTCAAAAT
CTTGATCATGATCATTCAAAAACCTCTCGGGCTTAAACCCCATCGAATCC
TCCCAAACTTTCGAATCCCAACCCATTTCGGCCACCATGAAATTCACACT
CCCGTCCTTTGGTATCACATACTTATCATCAAAAACAAAATCCTCTGTCA
CGGCATGTGGCAACACAAAATGCCCAGGCGGGTGCCTCCTCAGTCCCTCT
AAAATCACTGCTTTCAAATACG
back to top