FC918229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_METNO (5'-nucleotidase surE OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=surE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDW-VGGKSNVNDYTLAAEACLPIINAILAEI 630 I+VTNDDGI APGL+ L + + V V AP++++S VSHS++ P+ R A + + GTP+DC +GV L PDLV+SG+N G N V YSGTVAGA E GV S+++S + VGG++NV +T A I + A I Sbjct: 3 ILVTNDDGIHAPGLKVLEEIARELSD-DVWVVAPETDQSGVSHSLSLNDPLRLRRV--------AETRFAVKGTPSDCVIMGVRHILKERGPDLVLSGVNRGQNVAEDVTYSGTVAGAMEGTILGVRSIALSQAYGVGGRANVKWHTAAEHGARTIRRILEAGI 157
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_HELPY (5'-nucleotidase surE OS=Helicobacter pylori GN=surE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 75/203 (36.95%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYT-LAAEACLPIINAILAEIRNQTYP--ERCFLNIDLPT-DIPNNKGYKLTKQGTSIFK 738 I++TNDDG A G+++L + L + V AP EKSA S IT P+ A Y + D GTP+DC L +++ DLVISGIN+GSN G +YSGTVAGA E GVPS++IS SN N T L+ + II ++ I + YP R LN+++P + +G ++T +G ++K Sbjct: 4 ILLTNDDGYHAKGIKALEQALEEMAE--IYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDD----GTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQI----LSNKNKNTPLSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNVPNCSLQEYQGERITPKGYRLYK 196
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_HELPH (5'-nucleotidase surE OS=Helicobacter pylori (strain HPAG1) GN=surE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 75/203 (36.95%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYT-LAAEACLPIINAILAEIRNQTYP--ERCFLNIDLPT-DIPNNKGYKLTKQGTSIFK 738 I++TNDDG A G+++L + L + V AP EKSA S IT P+ A Y + D GTP+DC L +++ DLVISGIN+GSN G +YSGTVAGA E GVPS++IS SN N T L+ + II ++ I + YP R LN+++P + +G ++T +G ++K Sbjct: 4 ILLTNDDGYHAKGIKALEQALEEMAE--IYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDD----GTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQI----LSNKNKNTPLSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNVPNCSLQEYQGERITPKGYRLYK 196
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_GRAFK (5'-nucleotidase surE OS=Gramella forsetii (strain KT0803) GN=surE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 133 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAA--EACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTS 729 KP I+VTNDDGI APG+R+LV V+ V V APDS +S + H+IT + +Y + SGTPADC + + L PDL +SGIN GSN +V+YSGT++ A EA G+P++ S + DY+L A E I I + P LN+++P KG K+ +Q + Sbjct: 5 KPLILVTNDDGITAPGIRTLVEVMKELG--DVIVVAPDSPQSGMGHAITISDTLFCEQVTIK--ESYKHKEYSCSGTPADCVKIATQEILHRK-PDLCVSGINHGSNSSINVIYSGTMSAAVEAGIEGIPAIGFS---------LLDYSLNADFEPTRKFIKTITKNVLKNGLPIGVVLNVNIPKLKEAEIKGIKVCRQANA 192
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_DESAD (5'-nucleotidase surE OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=surE PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22 Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 543 I++TNDDGI A GLR+L L VQV AP +E+SAV H+++ P+ + + DG T V GTP DC LG++ L + PD+V+SGIN G+N G ++YSGTV+ A E G P++++SYD Sbjct: 3 ILLTNDDGIQAVGLRALYHGLKRAGM-NVQVVAPVAEQSAVGHAVSLSSPLRVKKFEEDGFTGLGVY-----GTPVDCVKLGLT-TLLETKPDIVVSGINSGANVGVDILYSGTVSAATEGALMGYPAMAVSYD 129
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_SILST (5'-nucleotidase surE OS=Silicibacter sp. (strain TM1040) GN=surE PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.261e-22 Identity = 79/256 (30.86%), Postives = 122/256 (47.66%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVL--VSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS-YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKMGWRRVTSE-----------MQGGKMLSTMTMDTDSAVTIETDTS-TPLEEDL 861 I+VTNDDGI APGL L ++ ++ V + AP E+S V H I++ HP G +A G+PADC + + + PDL++SG+N G+N + +YSGT+ GA E GVP++++S Y G + N + A ++ +L+ P R F NI+ P + KG K+T QG + G R E ++GG + +TD+A ++ S TP+ DL Sbjct: 3 ILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSEL---GPRRFAAE-----GSPADCVLAALHVVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQGVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSATPQNDSPYRLFYNINFPPVAAGDVKGIKVTTQGC---RSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISVTPMRADL 247
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_BEII9 (5'-nucleotidase surE OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=surE PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.261e-22 Identity = 61/147 (41.50%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSD--IYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDW---VGGKSNV 567 I++TNDDGI+APGL L R+ S V V AP+S++S V+HS++ P+ R +SD + GTP DC +GV L PDLV+SG+N G N V+YSGTVAGA E G+PS+++S + GG+S + Sbjct: 3 ILITNDDGINAPGLAVLERI-ASALSDDVFVVAPESDQSGVAHSLSLSDPLRLRK----------ISDRRFAVKGTPTDCVIMGVRSILIEQKPDLVLSGVNCGQNLAEDVIYSGTVAGAMEGTILGIPSIALSQCYEAGTGGRSGI 138
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_RHOPT (5'-nucleotidase surE OS=Rhodopseudomonas palustris (strain TIE-1) GN=surE PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22 Identity = 70/195 (35.90%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 723 I+ TNDDGI APGL+++ ++ + + V V AP+ ++S VSHS++ P+ R G +AV GTP DC +G L PDLV+SG+N G N VVYSGT+AGA E G+PS ++S ++ N + A II ++A P+ +NI+ P P+ KG +T+QG Sbjct: 3 ILCTNDDGIHAPGLKTVEQIARAISD-DVWVVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVR-----GTPTDCVIMGSRFILKDKAPDLVLSGVNRGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFTIETRNAPLWETARTHAPDIIRKVMA----AGVPKNTVVNINFPACTPDKVKGVVVTRQG 184
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_RHOPA (5'-nucleotidase surE OS=Rhodopseudomonas palustris GN=surE PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22 Identity = 70/195 (35.90%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 723 I+ TNDDGI APGL+++ ++ + + V V AP+ ++S VSHS++ P+ R G +AV GTP DC +G L PDLV+SG+N G N VVYSGT+AGA E G+PS ++S ++ N + A II ++A P+ +NI+ P P+ KG +T+QG Sbjct: 3 ILCTNDDGIHAPGLKTVEQIARAISD-DVWVVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVR-----GTPTDCVIMGSRFILKDKAPDLVLSGVNRGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFTIETRNAPLWETARTHAPDIIRKVMA----AGVPKNTVVNINFPACTPDKVKGVVVTRQG 184
BLAST of FC918229 vs. ExPASy Swiss-Prot
Match: SURE_RHILO (5'-nucleotidase surE OS=Rhizobium loti GN=surE PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22 Identity = 73/203 (35.96%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 142 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSDIYISGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKM 741 I++TNDDGI A GL SL RV T V V AP+ ++S +HS++ P+ R G +AV GTP DC +GV + L P PD+++SGIN G+N V YSGTVAGA E G+ S+++S Y +VG D + E + A+L ++ P+ LN++ P +P G +T QG + + Sbjct: 3 ILLTNDDGIHAEGLASLERV-ARTLSDDVWVVAPEQDQSGYAHSLSISEPLRLRKI---GEKHFAVR-----GTPTDCVIMGVKKIL-PGAPDVILSGINSGANIADDVTYSGTVAGAMEGALLGIRSIALSQGYSYVG-----EDRIVPYETTEALAPALLKKLVATPLPDGVLLNVNFPNCLPEEVVGTVVTMQGKLVHSL 190 The following BLAST results are available for this feature:
BLAST of FC918229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918229 ID=FC918229; Name=FC918229; organism=Citrus clementina; type=EST; length=903bpback to top |