FC918242

Overview
NameFC918242
Unique NameFC918242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.019e-41
Identity = 82/173 (47.40%), Postives = 113/173 (65.32%), Query Frame = 3
Query:  360 EDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD-YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSK 872
            +D ++SLPGQP  + F Q++GYV VD   GR+LFY+  EA      KPL LWLN           A  E+GPF    DG+ LR N  +WNK +N+LF++SPAGVG+SY+NT+SD    GD  T  D + F++ W E+FPE+K R  ++ GESYAGHYIP+LA ++++ N  +K
Sbjct:   35 KDKIISLPGQPPNLNFSQFSGYVTVDPAAGRALFYWLTEAPRPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRNKGAK 207          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41
Identity = 84/184 (45.65%), Postives = 117/184 (63.59%), Query Frame = 3
Query:  360 EDLVVSLPGQPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVE-PHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN-------AHSKGFQV 884
            ED + +LPGQPKV F Q++GYV V+  +GRSLFY+  E+    PH KPL LWLN           A  E+GPF     G  L  N+ SWN  +NLLF+ESP GVG+SY+NT+SD+   GD  TA++  +F+++W  +FP+++ R+ ++ GESYAGHY+PQLA  +  +N        + KGF V
Sbjct:   28 EDRIKALPGQPKVGFSQFSGYVTVNESHGRSLFYWLTESSSHSPHTKPLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYLNNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYNNAYKNPVINLKGFMV 211          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.726e-41
Identity = 87/181 (48.07%), Postives = 111/181 (61.33%), Query Frame = 3
Query:  357 AEDLVVSLPGQPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD-YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHS----KGFQV 884
            A D +V LPGQP+V F  Y+GY+ VD   GRSLFY   EA  E    PL LWLN           A  ELG F     G GL  N   WNK +N+LF++SPAGVG+SY+NT+SD Y  GD  TA D + F+  W+E+FP +K RE ++ GESYAGHY+P+L+  L+H + +     KGF V
Sbjct:   39 AADRIVRLPGQPEVDFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPELSQ-LVHRSGNPVINLKGFMV 218          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.784e-41
Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 3
Query:  369 VVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD-YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            V  +PGQ    +F  YAGYV V    G +LFY+F EA  +P  KPL LWLN              E+GPF+   DG+G+  N  SWN+ +N+LF++SP GVG+SYSNT++D  + GD  TA+D  VF+  W E+FP++K RE +LTGESYAGHY+PQLA  +  H+
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQAIKRHH 166          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.498e-40
Identity = 82/172 (47.67%), Postives = 109/172 (63.37%), Query Frame = 3
Query:  360 EDLVVSLPGQPK-VAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYN----CGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +DL+  LPGQP  V+FRQY GYV V+  + R L+YYFVEA       PL +W N           AF ELGPF     GR L RN  SWN  +N+LF+ESP   G+SYS+   D       GD +TA D ++F+MNW E+FPE+K R++++ G+SYAGHY+PQLA +++H N
Sbjct:   62 KDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLGG-AFLELGPFRVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERFPEYKGRDIYIAGQSYAGHYVPQLAQIIIHRN 232          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.498e-40
Identity = 81/169 (47.93%), Postives = 109/169 (64.50%), Query Frame = 3
Query:  360 EDLVVSLPGQPKVAFRQYAGYVDVDVKNG-RSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD-YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +DLV  LPGQP V F+ YAGYV++  +   ++LFY+F EA+     +PL LWLN           A  ELGPF    +G  L  N  SWNK +N+LF+E+P GVG+SY+N + D    GD  TA D   F++NW+ KFPEF+S E +++GESYAGHY+PQLA+V+   N
Sbjct:   37 DDLVTGLPGQPPVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQLAEVIYDRN 205          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.957e-40
Identity = 77/168 (45.83%), Postives = 111/168 (66.07%), Query Frame = 3
Query:  360 EDLVVSLPGQPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            ED++ +LPGQP+V F Q++GYV V+  +GRSLFY+  E+    H KPL LWLN           A  E+GPF     G  L  N  +WN  +N+LF+ESPAGVG+SY+NT+SD  + GD  TA++  +F++ W  +FP+++ R+ ++ GESYAGHY+PQLA  +  +N
Sbjct:   28 EDMIKALPGQPQVGFSQFSGYVTVNESHGRSLFYWLTESPSSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQLAKKIHLYN 195          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.694e-40
Identity = 84/181 (46.41%), Postives = 110/181 (60.77%), Query Frame = 3
Query:  357 AEDLVVSLPGQPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSD-YNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHS----KGFQV 884
            A D +  LPGQP V F  Y+GY+ VD   GRSLFY   EA  +    PL LWLN           A  ELG F  +  G GL  N   WNK +N+LF++SPAGVG+SY+NT+SD Y  GD  TA D + F+  W+E+FP +K R+ ++ GESYAGHY+P+L+  L+H + +     KGF V
Sbjct:    7 AADRIARLPGQPAVDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQ-LVHRSKNPVINLKGFMV 186          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.436e-40
Identity = 79/172 (45.93%), Postives = 111/172 (64.53%), Query Frame = 3
Query:  360 EDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNC-GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHS 869
            +D V  LPGQ   V+F  Y+G+V  + + GR+LFY+  EA  +   KPL LWLN              E+GPF+ + DG+ L  N  SWN+A+N+LF+++P GVG+SYSNT+SD    GD  TA D   F++ W E+FPE+K R+ ++ GESYAGHYIPQL++ ++ HN  S
Sbjct:   35 QDKVSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPFHIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIVKHNQGS 206          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.295e-39
Identity = 80/172 (46.51%), Postives = 109/172 (63.37%), Query Frame = 3
Query:  360 EDLVVSLPGQPK-VAFRQYAGYVDVDVKNGRSLFYYFVEAEV-EPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHS 869
            +D +  LPGQP  VAF  Y GYV +D  NGR+L+Y+F EA+  +P   PL LWLN           A  ELGPF    +G  L  N  +WNKA+N+LF ESPAGV +SYSNT+SD + GD   A+D + F++ W+E+FP +  RE ++ GES  GH+IPQL+ V+  +  +S
Sbjct:   62 DDRIPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRVHTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES--GHFIPQLSQVVYRNRNNS 231          
The following BLAST results are available for this feature:
BLAST of FC918242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
SCP28_ARATH3.019e-4147.40Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP22_ARATH3.943e-4145.65Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
CBP2_HORVU6.726e-4148.07Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CBP22_HORVU8.784e-4148.19Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
SCP37_ARATH1.498e-4047.67Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP35_ARATH1.498e-4047.93Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP23_ARATH1.957e-4045.83Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
CBP2_WHEAT5.694e-4046.41Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP29_ARATH7.436e-4045.93Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
HNLS_SORBI6.295e-3946.51P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA62BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918242 ID=FC918242; Name=FC918242; organism=Citrus clementina; type=EST; length=885bp
ATTTTCAAAGATGCTTTGCGTTTATTTAGTTTAATTATCCATTAGTATCT
TTTTGTTAAAGTAGACCCAGAATTCACGTGACTGGTGTAACAGAATTTGT
TTGATAAAGATATACAAGGGAATTATTATCATCCATGATTTTTAATACAT
ATAACTCTTTATAGGTTGCTTTTGGTTTCATTATCATTATATATTTGAAC
GTGCAATTCCATCTAAATGAATGTACATGTGAGCTTCCCGTGACAAATCT
TGAGATGGGTAGGTGGTGTTTTGGTGGGTTCTTGAATATTTCTTTAGTGT
TGTTGTTGTTGTTGTTGGTGAGTAGAAGTAATGTTGCATACGTGGCGGCG
TTCCCGGCGGAGGATCTGGTGGTGAGCTTGCCGGGGCAACCGAAGGTTGC
CTTCAGGCAATATGCTGGCTATGTTGATGTTGATGTCAAAAATGGCAGAA
GCTTGTTTTACTACTTTGTTGAAGCTGAAGTCGAACCGCATGAGAAACCT
CTCACTCTTTGGCTTAATGGAGGCCCAGGTTGCTCTTCTGTTGGAGGAGG
TGCTTTCACAGAATTGGGTCCATTTTATCCAAGAGGTGATGGCCGGGGCC
TTAGAAGGAATTCGATGTCATGGAATAAAGCATCAAATCTTCTCTTTGTT
GAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGACTA
TAATTGCGGGGATGCCTCCACTGCCAGGGATATGCATGTATTTATGATGA
ACTGGTATGAAAAATTCCCAGAATTCAAGTCAAGAGAATTGTTTCTTACA
GGGGAAAGCTATGCAGGTCATTACATACCGCAGTTGGCTGACGTTCTGCT
GCACCATAATGCACATTCAAAGGGGTTTCAAGTTT
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