FC918242

Overview
NameFC918242
Unique NameFC918242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.174e-25
Identity = 68/186 (36.56%), Postives = 101/186 (54.30%), Query Frame = 3
Query:  327 SNVAYVAAFPAEDLVVSLPGQPKVA-FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQ 881
            S+ ++  A PA D V  LPG      F  Y+GY+       + L Y+  E+   P + PL LWLN              ELGPF+ +  G  +  N  +WNK +N+LF+ESPAGVG+SYS T  +    D   +   ++ ++++  KFPE+K R+ ++TGESYAG YIP LA  +L+   +   F+
Sbjct:   12 SSYSFCLAAPATDKVNDLPGLTFTPDFFHYSGYLRA--WTDKYLHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGL-IEELGPFHVKDFGNSIYYNEYAWNKFANVLFLESPAGVGYSYS-TNFNLTVSDDEVSLHNYMALLDFLSKFPEYKGRDFWITGESYAGVYIPTLAVRILNDKKNFPNFK 193          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.825e-25
Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = 3
Query:  360 EDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDY-NCGDASTARDMHVFMMNWYE-KFPEFKSRELFLTGESYAGHYIPQLADVLL 851
            +DL+ +LPG   K  F+ Y+GYVD +      + Y   E+   P   PL +W N            F ELGPFY   DG+ L  N  +WN  +N+L++ESP GVG+SY  TT  Y    D  +A   +  + N++    P++ +R  +L+GESYAG YIP L D+++
Sbjct:   21 KDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGL-FEELGPFYVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTNFFNVAQPKYTNRTFYLSGESYAGIYIPMLTDLIV 186          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.354e-22
Identity = 55/169 (32.54%), Postives = 91/169 (53.85%), Query Frame = 3
Query:  333 VAYVAAFPAEDLVVSLPGQP-KVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 836
            +A+       + +  LPG   +  F+ Y+G+  V   +   L Y+FVE++ EP   PL  W N              E+GP+    DG+ LR N  SWNK ++++++ESPAGVG+SY+ T  +    D  T+ + +  +  ++ +FP+F+  + F+ GESY G Y+P L
Sbjct:    7 LAFFVGVTCGEEIKDLPGLDFEPNFKHYSGFFQVS--DNHVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGL-LNEMGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYA-TDGNITTNDDLTSLENYEAVKQFFTEFPQFRHHQTFIMGESYGGVYVPTL 171          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 45/153 (29.41%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  390 PKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 848
            P +  + YAG++ V+     +LF++F  A+++P + P+ LWL             F E GP+    +   LR     W    ++L++++P G G+S+++ T  Y   +   ARD++  ++ +++ FPE+K+ + ++TGESYAG Y+P +A ++
Sbjct:   67 PGLNMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGL-FVEHGPYVVTSN-MTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLI 217          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 54/168 (32.14%), Postives = 87/168 (51.79%), Query Frame = 3
Query:  384 GQPKVA-FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            G P V  F  +AGY  +       +FY+F E+     + P+ +WL             F E GPF    +   L  N   W+KASNL++V+ P G G+SY++  SD    +   + D++ F+  ++++ P+F   + ++TGESYAGHYIP LA  +   N + +G  +
Sbjct:   92 GSPSVQDFGHHAGYYKLPNSKAARMFYFFFESRTNKAD-PVVIWLTGGPGCSSELAL-FYENGPFTVSNNS-SLSWNEFGWDKASNLIYVDQPVGTGFSYTSDQSDLRHDEDGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHRGNKNKEGTHI 256          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 7.731e-21
Identity = 57/173 (32.95%), Postives = 89/173 (51.45%), Query Frame = 3
Query:  372 VSLPGQPK--VAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            V+LPG P+       +AGY  +   +   +FY+F E+  +  E P+ +WL             F E GPF    +   L  N   W+K SN++FV+ P G G+SYS+   D    +   + D++ F+  +++K PEF   + F+TGESYAGHYIP  A  +   N  ++G  +
Sbjct:   79 VTLPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFESRGKK-EDPVVIWLTGGPGCSSELA-VFYENGPF-TIANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHI 248          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.010e-20
Identity = 55/161 (34.16%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRG-----LRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 830
            LV SLPG +  + F    GYV +       LFYYFV++E  P   PL +WL             F   GP   +GD        L   S SW K +N+L++E+PAG G+SY+ T   +   D      +  F+ +W+ K PEF S   ++ G+SY+G  +P
Sbjct:   26 LVKSLPGFEGPLPFELETGYVSIGESGDVELFYYFVKSERNPENDPLMIWLTGGPGCSSICGLLFAN-GPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAPAGSGYSYAKTRRAFESSDTKQMHQIDQFLRSWFVKHPEFISNPFYVGGDSYSGKIVP 185          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.319e-20
Identity = 50/151 (33.11%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  408 QYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            Q +GY +V+     +LFY F E++  P   PL LWL            AF E GP++   D   L  N  SWN  +N+L+V+SP G G+SY   +  Y+  +   + +++ F+  +  K+P++    L++ GESYAGHY+P  +  +   N
Sbjct:   25 QLSGYFNVNETTNANLFYLFYESQNSPSTDPLILWLTGGPGCSSLMA-AFYENGPYFVN-DNLTLSENPNSWNMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISENLYSFLTQFLSKYPKYSKLPLYIFGESYAGHYVPSFSYYIYQKN 173          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.722e-20
Identity = 44/148 (29.73%), Postives = 85/148 (57.43%), Query Frame = 3
Query:  405 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVL 848
            R YAG++ V+     +LF++F  A+++P + P+ LWL             F E GP+    +   LR     W    ++L++++P G G+S+++ T  Y   +   A+D++  ++ +++ FPE+K+ + ++TGESYAG Y+P +A ++
Sbjct:   72 RSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGFSSMFGL-FVEHGPYVVTSN-MTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVAQDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLI 217          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 3
Query:  378 LPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRG-----LRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAH 866
            LPG +  + F    GY+ V       LFYYF+++E  P E PL +WL            AF E+GP   + +G       L   S SW K ++++F++ P G G+SYS T   Y   D   A+  + F+  W  + P+F S  +++ G+SYAG  +P +   +   N H
Sbjct:   32 LPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALSALAF-EIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGGDSYAGIVVPAIVQQISIGNEH 199          
The following BLAST results are available for this feature:
BLAST of FC918242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
YSS2_CAEEL5.174e-2536.56Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
YPP3_CAEEL8.825e-2537.13Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
YUW5_CAEEL5.354e-2232.54Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
CPVL_HUMAN4.532e-2129.41Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]
SCP48_ARATH7.731e-2132.14Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
CBP3_HORVU7.731e-2132.95Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SCP19_ARATH1.010e-2034.16Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCPL1_DICDI1.319e-2033.11Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
CPVL_PONAB1.722e-2029.73Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
SCP18_ARATH2.938e-2031.95Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA62BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918242 ID=FC918242; Name=FC918242; organism=Citrus clementina; type=EST; length=885bp
ATTTTCAAAGATGCTTTGCGTTTATTTAGTTTAATTATCCATTAGTATCT
TTTTGTTAAAGTAGACCCAGAATTCACGTGACTGGTGTAACAGAATTTGT
TTGATAAAGATATACAAGGGAATTATTATCATCCATGATTTTTAATACAT
ATAACTCTTTATAGGTTGCTTTTGGTTTCATTATCATTATATATTTGAAC
GTGCAATTCCATCTAAATGAATGTACATGTGAGCTTCCCGTGACAAATCT
TGAGATGGGTAGGTGGTGTTTTGGTGGGTTCTTGAATATTTCTTTAGTGT
TGTTGTTGTTGTTGTTGGTGAGTAGAAGTAATGTTGCATACGTGGCGGCG
TTCCCGGCGGAGGATCTGGTGGTGAGCTTGCCGGGGCAACCGAAGGTTGC
CTTCAGGCAATATGCTGGCTATGTTGATGTTGATGTCAAAAATGGCAGAA
GCTTGTTTTACTACTTTGTTGAAGCTGAAGTCGAACCGCATGAGAAACCT
CTCACTCTTTGGCTTAATGGAGGCCCAGGTTGCTCTTCTGTTGGAGGAGG
TGCTTTCACAGAATTGGGTCCATTTTATCCAAGAGGTGATGGCCGGGGCC
TTAGAAGGAATTCGATGTCATGGAATAAAGCATCAAATCTTCTCTTTGTT
GAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGACTA
TAATTGCGGGGATGCCTCCACTGCCAGGGATATGCATGTATTTATGATGA
ACTGGTATGAAAAATTCCCAGAATTCAAGTCAAGAGAATTGTTTCTTACA
GGGGAAAGCTATGCAGGTCATTACATACCGCAGTTGGCTGACGTTCTGCT
GCACCATAATGCACATTCAAAGGGGTTTCAAGTTT
back to top