FC918242

Overview
NameFC918242
Unique NameFC918242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC918242_ssr298 microsatellite FC918242_ssr298:298..315. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig13826 contig Ccv1_Contig13826:27..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBPX_ORYSJ (Serine carboxypeptidase-like OS=Oryza sativa subsp. japonica GN=CBP31 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  411 YAGYVDVDVKNGRSLFYYFVEAEVEPHEK-PLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            +AGY  +   +   LFY+F E+     E  P+ +WL             F E GPF+   D   L  N   W++ SNL++V+ P G G+SYS+   D    +A  + D++ F+  ++ + P F   + ++TGESYAGHYIP  A  +   N +S+G  +
Sbjct:   17 HAGYYRLPNTHDARLFYFFFESRGSKGEDDPVVIWLTGGPGCSSELAL-FYENGPFHI-ADNMSLVWNDFGWDQESNLIYVDQPTGTGFSYSSNPRDTRHDEAGVSNDLYAFLQAFFTEHPNFAKNDFYITGESYAGHYIPAFASRVYKGNKNSEGIHI 173          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP3_WHEAT (Serine carboxypeptidase 3 OS=Triticum aestivum GN=CBP3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 57/173 (32.95%), Postives = 89/173 (51.45%), Query Frame = 3
Query:  372 VSLPGQPKVA--FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            V+LPG P+       +AGY  +   +   +FY+F E+  +  E P+ +WL             F E GPF    +   L  N   W+K SN++FV+   G G+SYS+   D    +A  + D++ F+  +++K PEF   + F+TGESYAGHYIP  A  +   N  ++G  +
Sbjct:   72 VTLPGLPEGVGDLGHHAGYYRLPNTHDARMFYFFFESRGKK-EDPVVIWLTGGPGCSSELA-VFYENGPF-TIANNMSLVWNKFGWDKISNIIFVDPATGTGFSYSSDDRDTRHDEAGVSNDLYDFLQVFFKKHPEFVKNDFFITGESYAGHYIPAFASRVHQGNKKNEGTHI 241          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.837e-20
Identity = 52/161 (32.30%), Postives = 83/161 (51.55%), Query Frame = 3
Query:  402 FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            F  YAGY  +       +FY+F E+  +  + P+ +WL             F E GPF    D   L  N   W+K SN+++V+ P G G+SY++  SD    +   + D++ F+  ++++ P+F   + F+TGESYAGHYIP LA  +   N   +G  +
Sbjct:   96 FGHYAGYYSLPHSKSAKMFYFFFESRNKTTD-PVVIWLTGGPGCSSSVAM-FYENGPFKISKD-LSLYWNDFGWDKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVSNDLYDFLQAFFKEHPKFVKNDFFITGESYAGHYIPALASRVHSGNKKKEGIPI 253          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP3_ORYSJ (Serine carboxypeptidase 3 OS=Oryza sativa subsp. japonica GN=CBP3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.011e-20
Identity = 55/173 (31.79%), Postives = 87/173 (50.29%), Query Frame = 3
Query:  372 VSLPGQPKVA--FRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            V+LPG P+       +AGY  +   +   +FY+  E+  +  E P+ +WL             F E GPF    +   L  N   W+  SN++FV+ P G G+SYS+   D    +   + D++ F+  +++K PEF   + F+TGESYAGHYIP  A  +   N  ++G  +
Sbjct:   72 VTLPGLPQGVGDLGHHAGYYRLPNTHDARMFYFLFESRGKK-EDPVVIWLTGGPGCSSELA-VFYENGPF-TISNNMSLAWNKFGWDTISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYSFLQVFFKKHPEFAKNDFFITGESYAGHYIPAFASRVHQGNKANEGIHI 241          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: YBY9_YEAST (Putative serine carboxypeptidase YBR139W OS=Saccharomyces cerevisiae GN=YBR139W PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20
Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 3
Query:  405 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +Q++GY+D   K+ +  FY+F E+  +P   P+ LWLN            F ELGP     D + +  N  SWN  ++++F+E P GVG+SY +             +D ++F+  ++E FP  +S +  + GESYAGHYIPQ+A  ++  N
Sbjct:   92 KQWSGYMDY--KDSKHFFYWFFESRNDPANDPIILWLNGGPGCSSFTGLLF-ELGPSSIGADMKPIH-NPYSWNNNASMIFLEQPLGVGFSYGDEKVS---STKLAGKDAYIFLELFFEAFPHLRSNDFHIAGESYAGHYIPQIAHEIVVKN 236          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP10_ARATH (Serine carboxypeptidase-like 10 OS=Arabidopsis thaliana GN=SCPL10 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.545e-20
Identity = 55/171 (32.16%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +V SLPG + ++ F    GY+ +  +    LFYYF+++E  P E PL LWL+            F E GP   +     G    L   + SW K +N+++++ P G G+SYS T    +  D S  + +H F+  W  K P+F S   ++TG+SY+G  +P L   +   N
Sbjct:   24 IVKSLPGLEGRLPFELETGYIGIGEEEDIQLFYYFIKSENNPKEDPLLLWLDGGPGCSSLGGLLF-ENGPVALKSAVYNGSNPSLFSTTYSWTKMANIIYLDQPVGSGFSYSRTPIGKS-SDTSEVKRIHEFLQKWLSKHPQFFSNPFYVTGDSYSGMIVPALVQEISKGN 192          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBPY_CANAL (Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 53/153 (34.64%), Postives = 84/153 (54.90%), Query Frame = 3
Query:  405 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRR--NSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHH 857
            +QY+GY+DV V   +  FYYF E+  +P   P+ LWLN            F ELGP       + L+   N  SWN  ++++F++ P  VG+SYS+ +        +  +D++ F+  +++ FPE+ + +  + GESYAGHYIP  A  +L H
Sbjct:  141 KQYSGYLDV-VDEDKHFFYYFFESRNDPKNDPVILWLNGGPGCSSLTGLFF-ELGP---SSIDKNLKPVYNPHSWNANASVIFLDQPINVGYSYSSQSVS---NTIAAGKDVYAFLQLFFKNFPEYANLDFHIAGESYAGHYIPAFASEILTH 285          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.904e-19
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 3
Query:  405 RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTA-RDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGF 878
            +QY GY+DV+  + R LF++F E+  +P   P+ LWLN            F ELGP     +      N  SWN  ++++F++ P   G+S      D +  D  TA +D++ F+  ++ KFP++   +  + GESYAGHYIPQ A  ++ HN  +  F
Sbjct:  587 KQYTGYLDVE--DDRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGL-FMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFS----NGDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFF 738          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP8_ARATH (Serine carboxypeptidase-like 8 OS=Arabidopsis thaliana GN=SCPL8 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +V  LPG +  + F    GY+ +        FYYF+++E  P E PL +WLN            F E GP   +     G    L   + SW K +N++F++ P G G+SYS T  D   GD S  +  H F+  W  + P++ S  L++ G+SY+G  +P L   +   N
Sbjct:   22 IVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIF-ENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGN 190          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP3_ARATH (Serine carboxypeptidase-like 3 OS=Arabidopsis thaliana GN=SCPL3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 54/161 (33.54%), Postives = 81/161 (50.31%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 830
            ++ SLPG +  + F    GY+ V  +    LFYYF+++E  P E PL LWL+            F E GP   +     G    L   + SW KAS+++F++ P G G+SYS T       D+  A+ +H F+  W  K  EF S   ++ G+SY+G  +P
Sbjct:   32 IIKSLPGFEGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLF-ENGPLAMKLDVYNGTLPSLVSTTYSWTKASSMIFLDQPVGAGFSYSRTQLLNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGMVVP 191          
The following BLAST results are available for this feature:
BLAST of FC918242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
CBPX_ORYSJ2.938e-2032.70Serine carboxypeptidase-like OS=Oryza sativa subsp... [more]
CBP3_WHEAT2.938e-2032.95Serine carboxypeptidase 3 OS=Triticum aestivum GN=... [more]
SCP47_ARATH3.837e-2032.30Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
CBP3_ORYSJ5.011e-2031.79Serine carboxypeptidase 3 OS=Oryza sativa subsp. j... [more]
YBY9_YEAST6.545e-2034.21Putative serine carboxypeptidase YBR139W OS=Saccha... [more]
SCP10_ARATH6.545e-2032.16Serine carboxypeptidase-like 10 OS=Arabidopsis tha... [more]
CBPY_CANAL1.458e-1934.64Carboxypeptidase Y OS=Candida albicans GN=CPY1 PE=... [more]
CBPY_SCHPO1.904e-1933.96Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]
SCP8_ARATH2.487e-1931.58Serine carboxypeptidase-like 8 OS=Arabidopsis thal... [more]
SCP3_ARATH5.540e-1933.54Serine carboxypeptidase-like 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA62BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918242 ID=FC918242; Name=FC918242; organism=Citrus clementina; type=EST; length=885bp
ATTTTCAAAGATGCTTTGCGTTTATTTAGTTTAATTATCCATTAGTATCT
TTTTGTTAAAGTAGACCCAGAATTCACGTGACTGGTGTAACAGAATTTGT
TTGATAAAGATATACAAGGGAATTATTATCATCCATGATTTTTAATACAT
ATAACTCTTTATAGGTTGCTTTTGGTTTCATTATCATTATATATTTGAAC
GTGCAATTCCATCTAAATGAATGTACATGTGAGCTTCCCGTGACAAATCT
TGAGATGGGTAGGTGGTGTTTTGGTGGGTTCTTGAATATTTCTTTAGTGT
TGTTGTTGTTGTTGTTGGTGAGTAGAAGTAATGTTGCATACGTGGCGGCG
TTCCCGGCGGAGGATCTGGTGGTGAGCTTGCCGGGGCAACCGAAGGTTGC
CTTCAGGCAATATGCTGGCTATGTTGATGTTGATGTCAAAAATGGCAGAA
GCTTGTTTTACTACTTTGTTGAAGCTGAAGTCGAACCGCATGAGAAACCT
CTCACTCTTTGGCTTAATGGAGGCCCAGGTTGCTCTTCTGTTGGAGGAGG
TGCTTTCACAGAATTGGGTCCATTTTATCCAAGAGGTGATGGCCGGGGCC
TTAGAAGGAATTCGATGTCATGGAATAAAGCATCAAATCTTCTCTTTGTT
GAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGACTA
TAATTGCGGGGATGCCTCCACTGCCAGGGATATGCATGTATTTATGATGA
ACTGGTATGAAAAATTCCCAGAATTCAAGTCAAGAGAATTGTTTCTTACA
GGGGAAAGCTATGCAGGTCATTACATACCGCAGTTGGCTGACGTTCTGCT
GCACCATAATGCACATTCAAAGGGGTTTCAAGTTT
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