FC918242

Overview
NameFC918242
Unique NameFC918242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-19
Identity = 49/158 (31.01%), Postives = 80/158 (50.63%), Query Frame = 3
Query:  411 YAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            +AGY  +    G S+FY+F E+     + P+ +WL             F E GPF    +   L  N   W++ SNLL+V+ P G G+SY+   SD    +   + D++ F+  ++ + P+    + ++TGESYAGHYIP  A  +   N  ++G  +
Sbjct:  100 HAGYYKLPKSRGASMFYFFFESR-NKKDAPVVIWLTGGPGCSSELA-VFYENGPFKITSN-MSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHYIPAFASRVHKGNKANEGVHI 254          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.234e-18
Identity = 52/161 (32.30%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 830
            +V  LPG +  + F    GY+ +  +    LFYYF+++E  P E PL LWL+            F E GP   +     G    L   + SW K S+++F++ P G G+SYS T       D+  A+ +H F+  W  K  EF S   ++ G+SY+G  +P
Sbjct:   31 IVKFLPGFEGSLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSISGLLF-ENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPSDSGEAKRIHEFLQKWLSKHQEFSSNPFYVAGDSYSGMVVP 190          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP12_ARATH (Serine carboxypeptidase-like 12 OS=Arabidopsis thaliana GN=SCPL12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.234e-18
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +V  LPG +  + F    GY+ +  +    LFYYF+++E  P E PL LWL+            F E GP   +     G    L   + SW K +N++F++ P G G+SYS         D    +++H F+  W  K P+F S   + +G+SY+G  +P L   +   N
Sbjct:   24 IVKFLPGFEGPLPFELETGYIGIGEEEDVQLFYYFIKSERNPKEDPLLLWLSGGPGCSSITGLLF-ENGPLALKSKVYNGSVPSLVSTTYSWTKTANIIFLDQPIGAGFSYSRIPLIDTPSDTGEVKNIHEFLQKWLSKHPQFSSNPFYASGDSYSGMIVPALVQEISKGN 193          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 830
            +V SLPG + ++ F    GY+ V  +    LFYYF+++E  P E PL LWL             F E GP   +     G    L   + SW K S+++F++ P G G+SYS T       D+  A+ +H F+  W  K   F S   ++ G+SY+G  +P
Sbjct:   32 IVKSLPGFEGQLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSAISGLLF-ENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSGLVVP 191          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBPY_PICPG (Carboxypeptidase Y OS=Pichia pastoris (strain GS115) GN=PRC1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = 3
Query:  393 KVAF-RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLL 851
            KV F +QY+GY+DV+  + +  FY+F E+  +P   P+ LWLN            F ELG      + + +  N  SWN  +++++++ P  VG+SYS+++            D++ F+  +++ FPE+++ +  + GESYAGHYIP  AD +L
Sbjct:  116 KVDFTKQYSGYLDVEADD-KHFFYWFFESRNDPQNDPIILWLNGGPGCSSLTGLFF-ELGSSRINENLKPIF-NPYSWNGNASIIYLDQPVNVGFSYSSSSVS---NTVVAGEDVYAFLQLFFQHFPEYQTNDFHIAGESYAGHYIPVFADEIL 263          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP9_ARATH (Serine carboxypeptidase-like 9 OS=Arabidopsis thaliana GN=SCPL9 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.750e-18
Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQL 836
            +V  LPG +  + F    GY+ +  +     FYYF++++  P E PL +WLN            F E GP   +     G    L   + SW K +N++F++ P G G+SYS T  +    D S  + +H F+  W  K P+F S   ++ G+SY+G  +P L
Sbjct:   24 IVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF-ENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPAL 184          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 52/161 (32.30%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIP 830
            +V  LPG +  + F    GY+ +  +    LFYYF+++E  P E PL LWL             F E GP   +     G    L   + SW K S+++F++ P G G+SYS T       D+  A+ +H F+  W  K  EF S   ++ G+SY+G  +P
Sbjct:   32 IVKFLPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSSISGLLF-ENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQEFSSNPFYVAGDSYSGLVVP 191          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.690e-18
Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 3
Query:  366 LVVSLPG-QPKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPR-----GDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            +V SLPG    + F    GY+ V  +    LFYYF+++E  P E PL LWL+            + E GP   +     G    L   + SW K S++++++ P G G+SYS T       D+  A+ +H F+  W  K  EF S   ++ G+SY G  IP L   +   N
Sbjct:   28 IVKSLPGFDGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSISGLLY-ENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPALVQEISKGN 197          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18
Identity = 43/150 (28.67%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  390 PKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLA 839
            P +  + YAGY+ V+     +LF++F  A  +P + P+ LWL             F E GP+    +   L R+   W  + ++L++++P G G+S+++    Y   +   A+D++  ++ +++ FPE+   + ++TGESYAG Y+P +A
Sbjct:   69 PGMYDKSYAGYITVNQTYNSNLFFWFFPARTQPADAPVVLWLQGGPGGSSMFGL-FVEHGPYIITSNMTVLSRD-FPWTFSLSMLYIDNPVGTGFSFTDHIQGYAIDEDDVAQDLYSALVQFFKLFPEYAKNDFYITGESYAGKYVPAIA 216          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 54/165 (32.73%), Postives = 82/165 (49.70%), Query Frame = 3
Query:  390 PKVAFRQYAGYVDVDVKNGRSLFYYFVEAEVEPH----EKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHNAHSK 872
            P  A    +GY+ V    G S+FY F EA+ EP     + PL +WL             F ELGP+        L RN  +WN+   LLFV++P GVG+S + +  D        A  ++  ++ + E+ P F++R ++ TGESYAG Y+P +   +L    + K
Sbjct:   29 PDEALPTKSGYLPVKPAPGSSMFYAFYEAQ-EPTTPLPDTPLLVWLQGGPGCSSMIGN-FYELGPWRVVSRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVYFTGESYAGKYVPAIGYYILKEKPNGK 191          
The following BLAST results are available for this feature:
BLAST of FC918242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
SCP49_ARATH7.236e-1931.01Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
SCP5_ARATH1.234e-1832.30Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
SCP12_ARATH1.234e-1830.41Serine carboxypeptidase-like 12 OS=Arabidopsis tha... [more]
SCP1_ARATH2.105e-1832.92Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]
CBPY_PICPG2.105e-1833.12Carboxypeptidase Y OS=Pichia pastoris (strain GS11... [more]
SCP9_ARATH2.750e-1831.29Serine carboxypeptidase-like 9 OS=Arabidopsis thal... [more]
SCP2_ARATH3.591e-1832.30Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]
SCP7_ARATH4.690e-1832.16Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
CPVL_RAT6.126e-1828.67Probable serine carboxypeptidase CPVL OS=Rattus no... [more]
SCP50_ARATH8.000e-1832.73Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA62BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918242 ID=FC918242; Name=FC918242; organism=Citrus clementina; type=EST; length=885bp
ATTTTCAAAGATGCTTTGCGTTTATTTAGTTTAATTATCCATTAGTATCT
TTTTGTTAAAGTAGACCCAGAATTCACGTGACTGGTGTAACAGAATTTGT
TTGATAAAGATATACAAGGGAATTATTATCATCCATGATTTTTAATACAT
ATAACTCTTTATAGGTTGCTTTTGGTTTCATTATCATTATATATTTGAAC
GTGCAATTCCATCTAAATGAATGTACATGTGAGCTTCCCGTGACAAATCT
TGAGATGGGTAGGTGGTGTTTTGGTGGGTTCTTGAATATTTCTTTAGTGT
TGTTGTTGTTGTTGTTGGTGAGTAGAAGTAATGTTGCATACGTGGCGGCG
TTCCCGGCGGAGGATCTGGTGGTGAGCTTGCCGGGGCAACCGAAGGTTGC
CTTCAGGCAATATGCTGGCTATGTTGATGTTGATGTCAAAAATGGCAGAA
GCTTGTTTTACTACTTTGTTGAAGCTGAAGTCGAACCGCATGAGAAACCT
CTCACTCTTTGGCTTAATGGAGGCCCAGGTTGCTCTTCTGTTGGAGGAGG
TGCTTTCACAGAATTGGGTCCATTTTATCCAAGAGGTGATGGCCGGGGCC
TTAGAAGGAATTCGATGTCATGGAATAAAGCATCAAATCTTCTCTTTGTT
GAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGACTA
TAATTGCGGGGATGCCTCCACTGCCAGGGATATGCATGTATTTATGATGA
ACTGGTATGAAAAATTCCCAGAATTCAAGTCAAGAGAATTGTTTCTTACA
GGGGAAAGCTATGCAGGTCATTACATACCGCAGTTGGCTGACGTTCTGCT
GCACCATAATGCACATTCAAAGGGGTTTCAAGTTT
back to top